FFCP PHASE1:Mm9::chr15:98784093..98784107,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22142 | |EntrezGene=22142 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P68369 | |UniProt=P68369 | ||
|association_with_transcript=-111bp_to_ENSMUST00000097014,ENSMUST00000136329_5end | |association_with_transcript=-111bp_to_ENSMUST00000097014,ENSMUST00000136329_5end | ||
|cluster_id=chr15:98784093..98784107,- | |||
|description=CAGE_peak_3_at_Tuba1a_5end | |description=CAGE_peak_3_at_Tuba1a_5end | ||
|id=chr15:98784093..98784107,- | |id=chr15:98784093..98784107,- | ||
|ontology_enrichment_celltype=CL:0000117!5.08e-09!23;CL:0000337!5.08e-09!23 | |ontology_enrichment_celltype=CL:0000117!5.08e-09!23;CL:0000337!5.08e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.82e-09,23;CL:0000337,3.82e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.11e-12!122;UBERON:0000025!4.65e-11!114;UBERON:0001049!1.20e-10!52;UBERON:0005068!1.20e-10!52;UBERON:0006241!1.20e-10!52;UBERON:0007135!1.20e-10!52;UBERON:0002020!5.01e-10!34;UBERON:0000955!2.12e-09!50;UBERON:0006238!2.12e-09!50;UBERON:0002616!2.46e-09!49;UBERON:0000033!7.24e-09!63;UBERON:0002791!2.73e-08!29;UBERON:0003528!2.73e-08!29;UBERON:0001893!2.73e-08!29;UBERON:0004121!2.96e-08!102;UBERON:0000924!2.96e-08!102;UBERON:0006601!2.96e-08!102;UBERON:0001017!4.96e-08!73;UBERON:0005743!4.96e-08!73;UBERON:0002346!1.41e-07!71;UBERON:0003075!1.41e-07!71;UBERON:0007284!1.41e-07!71;UBERON:0000073!1.43e-07!75;UBERON:0001016!1.43e-07!75;UBERON:0003080!6.89e-07!40 | |ontology_enrichment_uberon=UBERON:0004111!2.11e-12!122;UBERON:0000025!4.65e-11!114;UBERON:0001049!1.20e-10!52;UBERON:0005068!1.20e-10!52;UBERON:0006241!1.20e-10!52;UBERON:0007135!1.20e-10!52;UBERON:0002020!5.01e-10!34;UBERON:0000955!2.12e-09!50;UBERON:0006238!2.12e-09!50;UBERON:0002616!2.46e-09!49;UBERON:0000033!7.24e-09!63;UBERON:0002791!2.73e-08!29;UBERON:0003528!2.73e-08!29;UBERON:0001893!2.73e-08!29;UBERON:0004121!2.96e-08!102;UBERON:0000924!2.96e-08!102;UBERON:0006601!2.96e-08!102;UBERON:0001017!4.96e-08!73;UBERON:0005743!4.96e-08!73;UBERON:0002346!1.41e-07!71;UBERON:0003075!1.41e-07!71;UBERON:0007284!1.41e-07!71;UBERON:0000073!1.43e-07!75;UBERON:0001016!1.43e-07!75;UBERON:0003080!6.89e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.05e-12,122;UBERON:0000025,4.67e-11,114;UBERON:0010314,5.28e-11,92;UBERON:0000073,8.65e-11,54;UBERON:0001049,2.21e-10,52;UBERON:0005068,2.21e-10,52;UBERON:0006241,2.21e-10,52;UBERON:0007135,2.21e-10,52;UBERON:0002020,3.63e-10,34;UBERON:0010371,1.94e-09,73;UBERON:0004121,8.56e-09,95;UBERON:0000924,8.56e-09,95;UBERON:0006601,8.56e-09,95;UBERON:0000955,1.57e-08,47;UBERON:0006238,1.57e-08,47;UBERON:0002616,1.84e-08,46;UBERON:0003528,2.11e-08,29;UBERON:0002791,2.11e-08,29;UBERON:0001893,2.11e-08,29;UBERON:0002346,2.92e-08,64;UBERON:0003075,2.92e-08,64;UBERON:0007284,2.92e-08,64;UBERON:0001017,6.87e-08,73;UBERON:0001016,2.10e-07,75 | |||
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| ||
|short_description=p3@Tuba1a | |short_description=p3@Tuba1a | ||
}} | }} |
Latest revision as of 13:32, 1 October 2015
Short description: | p3@Tuba1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tuba1a_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_ENSMUST00000097014, ENSMUST00000136329_5end |
EntrezGene: | Tuba1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.82e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.82e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.05e-12 | 122 |
tube | 4.67e-11 | 114 |
structure with developmental contribution from neural crest | 5.28e-11 | 92 |
regional part of nervous system | 8.65e-11 | 54 |
neural tube | 2.21e-10 | 52 |
neural rod | 2.21e-10 | 52 |
future spinal cord | 2.21e-10 | 52 |
neural keel | 2.21e-10 | 52 |
gray matter | 3.63e-10 | 34 |
ecto-epithelium | 1.94e-09 | 73 |
ectoderm-derived structure | 8.56e-09 | 95 |
ectoderm | 8.56e-09 | 95 |
presumptive ectoderm | 8.56e-09 | 95 |
brain | 1.57e-08 | 47 |
future brain | 1.57e-08 | 47 |
regional part of brain | 1.84e-08 | 46 |
brain grey matter | 2.11e-08 | 29 |
regional part of telencephalon | 2.11e-08 | 29 |
telencephalon | 2.11e-08 | 29 |
neurectoderm | 2.92e-08 | 64 |
neural plate | 2.92e-08 | 64 |
presumptive neural plate | 2.92e-08 | 64 |
central nervous system | 6.87e-08 | 73 |
nervous system | 2.10e-07 | 75 |