FF:11249-116E7: Difference between revisions

Revision as of 20:19, 9 July 2012

Name:	Pancreatic stromal cells, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	pancreas
dev stage	39 years old adult
sex	male
age	39
cell type	pancreatic stromal cell
cell line	NA
company	Cell systems
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.049
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.252
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.525
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0606
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.124
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0696
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.552
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.175
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.118
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0798
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	5.368574e-4
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0696
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0696
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.137
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.157
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0696
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.101
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.101
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.104
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.206
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.291
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0362
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.394
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10877

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0444
MA0003.1	MA0003.1	0.67
MA0004.1	MA0004.1	0.403
MA0006.1	MA0006.1	0.306
MA0007.1	MA0007.1	0.674
MA0009.1	MA0009.1	0.756
MA0014.1	MA0014.1	0.91
MA0017.1	MA0017.1	0.296
MA0018.2	MA0018.2	5.25978e-7
MA0019.1	MA0019.1	0.798
MA0024.1	MA0024.1	0.31
MA0025.1	MA0025.1	0.00116
MA0027.1	MA0027.1	0.592
MA0028.1	MA0028.1	0.732
MA0029.1	MA0029.1	0.804
MA0030.1	MA0030.1	0.0798
MA0031.1	MA0031.1	0.182
MA0035.2	MA0035.2	0.0091
MA0038.1	MA0038.1	0.701
MA0039.2	MA0039.2	0.27
MA0040.1	MA0040.1	0.757
MA0041.1	MA0041.1	0.737
MA0042.1	MA0042.1	0.877
MA0043.1	MA0043.1	5.25152e-6
MA0046.1	MA0046.1	0.976
MA0047.2	MA0047.2	0.245
MA0048.1	MA0048.1	0.0107
MA0050.1	MA0050.1	0.883
MA0051.1	MA0051.1	0.436
MA0052.1	MA0052.1	0.122
MA0055.1	MA0055.1	0.287
MA0057.1	MA0057.1	0.3
MA0058.1	MA0058.1	0.385
MA0059.1	MA0059.1	0.137
MA0060.1	MA0060.1	0.0287
MA0061.1	MA0061.1	0.0213
MA0062.2	MA0062.2	7.06142e-5
MA0065.2	MA0065.2	0.116
MA0066.1	MA0066.1	0.411
MA0067.1	MA0067.1	0.00201
MA0068.1	MA0068.1	0.895
MA0069.1	MA0069.1	0.121
MA0070.1	MA0070.1	0.98
MA0071.1	MA0071.1	0.385
MA0072.1	MA0072.1	0.254
MA0073.1	MA0073.1	0.845
MA0074.1	MA0074.1	0.594
MA0076.1	MA0076.1	0.663
MA0077.1	MA0077.1	0.159
MA0078.1	MA0078.1	0.153
MA0079.2	MA0079.2	0.611
MA0080.2	MA0080.2	5.52576e-10
MA0081.1	MA0081.1	0.0331
MA0083.1	MA0083.1	0.867
MA0084.1	MA0084.1	0.0134
MA0087.1	MA0087.1	0.8
MA0088.1	MA0088.1	0.0296
MA0090.1	MA0090.1	0.0129
MA0091.1	MA0091.1	0.0484
MA0092.1	MA0092.1	0.534
MA0093.1	MA0093.1	0.44
MA0099.2	MA0099.2	0.007
MA0100.1	MA0100.1	0.598
MA0101.1	MA0101.1	0.0145
MA0102.2	MA0102.2	0.462
MA0103.1	MA0103.1	9.37311e-5
MA0104.2	MA0104.2	0.0181
MA0105.1	MA0105.1	0.85
MA0106.1	MA0106.1	0.0179
MA0107.1	MA0107.1	8.79082e-4
MA0108.2	MA0108.2	0.732
MA0111.1	MA0111.1	0.206
MA0112.2	MA0112.2	0.439
MA0113.1	MA0113.1	0.97
MA0114.1	MA0114.1	0.142
MA0115.1	MA0115.1	0.499
MA0116.1	MA0116.1	0.93
MA0117.1	MA0117.1	0.0979
MA0119.1	MA0119.1	0.65
MA0122.1	MA0122.1	0.271
MA0124.1	MA0124.1	0.672
MA0125.1	MA0125.1	0.418
MA0131.1	MA0131.1	0.897
MA0135.1	MA0135.1	0.379
MA0136.1	MA0136.1	8.67073e-11
MA0137.2	MA0137.2	0.756
MA0138.2	MA0138.2	0.78
MA0139.1	MA0139.1	0.698
MA0140.1	MA0140.1	0.0117
MA0141.1	MA0141.1	0.308
MA0142.1	MA0142.1	0.0359
MA0143.1	MA0143.1	0.983
MA0144.1	MA0144.1	0.693
MA0145.1	MA0145.1	0.684
MA0146.1	MA0146.1	0.836
MA0147.1	MA0147.1	0.0262
MA0148.1	MA0148.1	0.0974
MA0149.1	MA0149.1	0.94
MA0150.1	MA0150.1	0.00172
MA0152.1	MA0152.1	0.0213
MA0153.1	MA0153.1	0.217
MA0154.1	MA0154.1	0.599
MA0155.1	MA0155.1	0.949
MA0156.1	MA0156.1	7.8661e-8
MA0157.1	MA0157.1	0.201
MA0159.1	MA0159.1	0.337
MA0160.1	MA0160.1	0.0572
MA0162.1	MA0162.1	0.0121
MA0163.1	MA0163.1	0.0484
MA0164.1	MA0164.1	0.915
MA0258.1	MA0258.1	0.312
MA0259.1	MA0259.1	0.382

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10877

Novel motif	Logo	P-value
1	1	0.227
10	10	0.515
100	100	0.379
101	101	0.666
102	102	0.155
103	103	0.949
104	104	0.766
105	105	0.416
106	106	0.101
107	107	0.803
108	108	0.324
109	109	0.824
11	11	0.693
110	110	0.431
111	111	0.131
112	112	0.924
113	113	1.12255e-4
114	114	0.514
115	115	0.213
116	116	0.23
117	117	0.361
118	118	0.917
119	119	0.105
12	12	0.369
120	120	0.328
121	121	0.343
122	122	0.00808
123	123	0.00121
124	124	0.798
125	125	0.606
126	126	0.685
127	127	0.673
128	128	0.838
129	129	0.445
13	13	0.544
130	130	0.115
131	131	0.206
132	132	0.21
133	133	0.183
134	134	0.433
135	135	0.28
136	136	0.997
137	137	0.0948
138	138	0.0927
139	139	2.8164e-5
14	14	0.181
140	140	0.282
141	141	0.0653
142	142	0.662
143	143	0.486
144	144	0.375
145	145	0.921
146	146	0.726
147	147	0.22
148	148	0.284
149	149	0.386
15	15	0.0781
150	150	0.269
151	151	0.384
152	152	0.388
153	153	0.874
154	154	0.753
155	155	6.08828e-4
156	156	0.939
157	157	0.0577
158	158	6.80512e-4
159	159	0.179
16	16	0.353
160	160	0.696
161	161	0.602
162	162	0.754
163	163	0.529
164	164	0.888
165	165	0.628
166	166	0.088
167	167	0.342
168	168	0.848
169	169	0.174
17	17	0.615
18	18	0.972
19	19	0.00308
2	2	0.641
20	20	0.588
21	21	0.0105
22	22	0.6
23	23	0.376
24	24	0.961
25	25	0.25
26	26	0.707
27	27	0.963
28	28	0.27
29	29	0.679
3	3	0.735
30	30	0.348
31	31	0.898
32	32	1.03259e-4
33	33	0.757
34	34	0.897
35	35	0.194
36	36	0.0285
37	37	0.0789
38	38	0.21
39	39	0.381
4	4	0.0176
40	40	0.0304
41	41	0.325
42	42	0.251
43	43	0.347
44	44	0.984
45	45	0.982
46	46	0.622
47	47	0.758
48	48	0.671
49	49	0.0471
5	5	0.24
50	50	0.342
51	51	0.846
52	52	0.784
53	53	0.262
54	54	0.624
55	55	0.19
56	56	0.913
57	57	0.73
58	58	0.13
59	59	0.722
6	6	0.696
60	60	0.0886
61	61	0.509
62	62	0.202
63	63	0.868
64	64	0.513
65	65	0.527
66	66	0.862
67	67	0.853
68	68	0.666
69	69	0.448
7	7	0.0319
70	70	0.0449
71	71	0.503
72	72	0.684
73	73	0.34
74	74	0.082
75	75	0.77
76	76	0.846
77	77	0.331
78	78	0.071
79	79	0.048
8	8	0.933
80	80	0.104
81	81	0.524
82	82	0.575
83	83	0.125
84	84	0.994
85	85	0.359
86	86	0.288
87	87	0.137
88	88	0.335
89	89	0.781
9	9	0.582
90	90	0.113
91	91	0.772
92	92	0.711
93	93	0.385
94	94	0.436
95	95	0.202
96	96	0.298
97	97	0.545
98	98	0.122
99	99	0.00261

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10877

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000042 pancreatic stromal cell
FF:0000146 human stromal cell of pancreas sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000255 (eukaryotic cell)
0002574 (stromal cell of pancreas)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001264 (pancreas)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000042 (pancreatic stromal cell)
0000146 (human stromal cell of pancreas sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.82!73.59!PRRX1;;chr4:81118647..81118666,+!p1@PRDM8!1.80!80.19!PRDM8;;chr2:239756671..239756732,+!p1@TWIST2!1.79!186.02!TWIST2;;chr10:28034739..28034756,-!p1@MKX!1.74!53.87!MKX;;chr7:19157248..19157268,-!p1@TWIST1!1.69!127.81!TWIST1;;chr15:57511609..57511651,+!p2@TCF12!1.62!67.86!TCF12;;chr3:141121847..141121868,+!p5@ZBTB38!1.58!55.26!ZBTB38;;chr1:170633348..170633399,+!p2@PRRX1!1.50!41.10!PRRX1;;chr7:27224842..27224872,-!p1@HOXA11!1.49!29.89!HOXA11;;chr2:239756739..239756755,+!p2@TWIST2!1.45!45.87!TWIST2;;chr6:1389789..1389821,+!p1@FOXF2!1.43!35.71!FOXF2;;chr7:27224795..27224840,-!p2@HOXA11!1.41!24.50!HOXA11;;chr12:66218255..66218304,+!p3@HMGA2!1.36!57.69!HMGA2;;chr15:42749722..42749739,-!p2@ZFP106!1.36!38.49!ZFP106;;chr17:59529743..59529798,+!p1@TBX4!1.35!21.37!TBX4;;chr9:132427883..132427951,+!p2@PRRX2!1.33!20.59!PRRX2;;chr12:66218598..66218645,+!p2@HMGA2!1.30!85.49!HMGA2;;chr5:134369905..134369972,-!p1@PITX1!1.30!29.19!PITX1;;chr9:132427972..132428056,+!p1@PRRX2!1.30!24.41!PRRX2;;chr17:59477233..59477263,+!p1@TBX2!1.27!54.30!TBX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.25!85.49!CREB3L1;;chr6:10415276..10415341,-!p2@TFAP2A!1.24!19.98!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.23!26.59!TFAP2A;;chr6:100912752..100912778,-!p2@SIM1!1.21!15.12!SIM1;;chr8:99956662..99956684,+!p1@OSR2!1.18!21.72!OSR2;;chr1:170633262..170633285,+!p3@PRRX1!1.17!15.64!PRRX1;;chr12:66218836..66218888,+!p1@HMGA2!1.16!124.76!HMGA2;;chr12:114845810..114845824,-!p1@TBX5!1.16!13.38!TBX5;;chr1:170632250..170632277,+!p7@PRRX1!1.15!13.03!PRRX1;;chr8:93074803..93074845,-!p1@RUNX1T1!1.14!12.86!RUNX1T1;;chr18:52969844..52969895,-!p27@TCF4!1.13!12.42!TCF4;;chr5:134369879..134369898,-!p2@PITX1!1.11!11.90!PITX1;;chr6:1312325..1312340,+!p1@FOXQ1!1.08!18.16!FOXQ1;;chr3:157823517..157823562,-!p1@SHOX2!1.07!11.64!SHOX2;;chr14:61116183..61116208,-!p1@SIX1!1.06!40.14!SIX1;;chr11:65686802..65686818,+!p6@DRAP1!1.06!18.42!DRAP1;;chr17:59477275..59477286,+!p3@TBX2!1.06!14.16!TBX2;;chr6:100912785..100912822,-!p1@SIM1!1.05!10.34!SIM1;;chr3:141121871..141121885,+!p13@ZBTB38!1.05!10.17!ZBTB38;;chr19:13134772..13134822,+!p2@NFIX!1.04!14.94!NFIX;;chr3:141121820..141121838,+!p9@ZBTB38!1.04!9.90!ZBTB38;;chr7:44143925..44143970,+!p1@AEBP1!1.01!207.65!AEBP1;;chr11:65667884..65667895,-!p2@FOSL1!1.01!36.14!FOSL1;;chr6:34204921..34204939,+!p3@HMGA1!1.00!275.94!HMGA1;;chr12:115122318..115122331,-!p2@TBX3!1.00!9.04!TBX3;;chrY:21906594..21906622,-!p1@KDM5D!1.00!9.04!KDM5D;;chr11:65687362..65687436,+!p3@DRAP1!0.99!40.92!DRAP1;;chr1:170632959..170632987,+!p4@PRRX1!0.99!9.56!PRRX1;;chr5:321810..321877,+!p1@AHRR!0.97!27.37!AHRR;;chr14:24837368..24837401,+!p1@NFATC4!0.97!20.07!NFATC4;;chr12:66218212..66218244,+!p5@HMGA2!0.97!12.34!HMGA2;;chr12:115121802..115121814,-!p5@TBX3!0.95!7.99!TBX3;;chr1:170632723..170632739,+!p8@PRRX1!0.95!7.82!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!0.93!7.56!PRRX1;;chr7:27213893..27213954,-!p1@HOXA10!0.93!7.56!HOXA10;;chr12:66218183..66218209,+!p4@HMGA2!0.92!14.60!HMGA2;;chr12:115121770..115121781,-!p4@TBX3!0.91!7.12!TBX3;;chr7:14029283..14029311,-!p1@ETV1!0.90!38.66!ETV1;;chr7:14028488..14028516,-!p2@ETV1!0.90!7.65!ETV1;;chrY:2803415..2803468,+!p1@ZFY!0.90!6.86!ZFY;;chr2:102091566..102091581,-!p1@RFX8!0.90!6.86!RFX8;;chr12:115121962..115121987,-!p1@TBX3!0.89!59.86!TBX3;;chr11:46299539..46299620,+!p2@CREB3L1!0.89!11.82!CREB3L1;;chr2:223163706..223163730,-!p1@PAX3!0.89!6.69!PAX3;;chr6:1389824..1389840,+!p3@FOXF2!0.89!6.69!FOXF2;;chr7:44143978..44143989,+!p2@AEBP1!0.88!12.34!AEBP1;;chr15:76629123..76629151,+!p1@ISL2!0.88!7.39!ISL2;;chr12:53614115..53614154,-!p1@RARG!0.87!36.32!RARG;;chr6:85474299..85474324,-!p1@TBX18!0.87!11.99!TBX18;;chr15:96869114..96869160,+!p11@NR2F2!0.86!8.60!NR2F2;;chr11:65687222..65687240,+!p7@DRAP1!0.86!8.25!DRAP1;;chr18:52969674..52969685,-!p24@TCF4!0.86!6.17!TCF4;;chr10:63809106..63809127,+!p1@ARID5B!0.85!88.27!ARID5B;;chr11:65686732..65686756,+!p2@DRAP1!0.85!27.28!DRAP1;;chr15:96869255..96869291,+!p6@NR2F2!0.85!11.47!NR2F2;;chr20:55204351..55204377,+!p1@TFAP2C!0.85!7.82!TFAP2C;;chr1:170632115..170632136,+!p9@PRRX1!0.85!6.08!PRRX1;;chr7:27239740..27239759,-!p2@HOXA13!0.85!6.08!HOXA13;;chr8:93074848..93074871,-!p3@RUNX1T1!0.84!5.99!RUNX1T1;;chr12:66357214..66357233,+!p13@HMGA2!0.84!5.91!HMGA2;;chr2:66662281..66662308,+!p1@MEIS1!0.83!20.94!MEIS1;;chr2:19558373..19558392,-!p1@OSR1!0.83!16.77!OSR1;;chr7:113726357..113726443,+!p1@FOXP2!0.83!10.34!FOXP2;;chr11:65687243..65687276,+!p8@DRAP1!0.83!7.99!DRAP1;;chr12:66218904..66218913,+!p11@HMGA2!0.83!5.82!HMGA2;;chr1:170632477..170632506,+!p6@PRRX1!0.83!5.82!PRRX1;;chr12:114843940..114843955,-!p2@TBX5!0.83!5.73!TBX5;;chr16:86544113..86544145,+!p1@FOXF1!0.82!7.12!FOXF1;;chrX:66763856..66763896,+!p1@AR!0.81!8.17!AR;;chr8:25902876..25902936,-!p1@EBF2!0.81!5.39!EBF2;;chr7:19157043..19157088,-!p2@TWIST1!0.80!14.34!TWIST1;;chr7:27239703..27239715,-!p1@HOXA13!0.80!5.30!HOXA13;;chr15:96874012..96874042,+!p2@NR2F2!0.79!50.13!NR2F2;;chr19:46801639..46801699,+!p1@HIF3A!0.79!5.21!HIF3A;;chr1:164528410..164528428,+!p1@PBX1!0.78!40.92!PBX1;;chr2:66662249..66662267,+!p2@MEIS1!0.78!21.03!MEIS1;;chr18:72922743..72922761,+!p3@TSHZ1!0.78!17.72!TSHZ1;;chr15:96874145..96874166,+!p7@NR2F2!0.78!10.17!NR2F2;;chr6:85473156..85473210,-!p2@TBX18!0.78!6.26!TBX18;;chr17:59477197..59477212,+!p2@TBX2!0.77!8.95!TBX2;;chr12:115122005..115122016,-!p3@TBX3!0.77!5.99!TBX3;;chr6:10412392..10412409,-!p4@TFAP2A!0.77!5.65!TFAP2A;;chr5:2751762..2751784,-!p1@IRX2!0.77!4.95!IRX2;;chr6:1389989..1390019,+!p2@FOXF2!0.77!4.87!FOXF2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.77!4.87!HOXC5;;chr18:52989031..52989079,-!p2@TCF4!0.76!11.99!TCF4;;chr12:66218573..66218596,+!p7@HMGA2!0.76!7.30!HMGA2;;chr1:158979792..158979814,+!p2@IFI16!0.75!49.35!IFI16;;chr18:22932080..22932170,-!p1@ZNF521!0.75!21.37!ZNF521;;chr1:158969752..158969780,+!p6@IFI16!0.75!8.60!IFI16;;chr15:57511589..57511608,+!p4@TCF12!0.75!4.60!TCF12;;chr10:63809013..63809041,+!p3@ARID5B!0.74!27.80!ARID5B;;chr1:164528445..164528459,+!p2@PBX1!0.74!15.29!PBX1;;chr7:14029312..14029325,-!p4@ETV1!0.74!5.73!ETV1;;chr1:170633058..170633084,+!p5@PRRX1!0.74!4.52!PRRX1;;chr10:63853436..63853442,+!p4@ARID5B!0.73!25.89!ARID5B;;chr16:31076332..31076388,-!p3@ZNF668!0.73!4.34!ZNF668;;chr12:66218378..66218401,+!p6@HMGA2!0.71!6.78!HMGA2;;chr1:170632762..170632786,+!p13@PRRX1!0.71!4.17!PRRX1;;chr4:174450089..174450153,-!p2@HAND2!0.71!4.08!HAND2;;chr3:37217736..37217753,-!p2@LRRFIP2!0.70!18.94!LRRFIP2;;chr7:44143997..44144008,+!p3@AEBP1!0.70!5.30!AEBP1;;chr12:66218420..66218439,+!p12@HMGA2!0.70!4.00!HMGA2;;chr2:102091144..102091183,-!p2@RFX8!0.70!4.00!RFX8;;chr9:110252035..110252057,-!p1@KLF4!0.69!70.98!KLF4;;chr16:79633894..79633954,-!p3@MAF!0.68!7.99!MAF;;chr5:43067636..43067674,+!p6@ZNF131!0.68!5.39!ZNF131;;chr6:134210243..134210257,+!p1@TCF21!0.67!3.65!TCF21;;chr11:65687158..65687216,+!p4@DRAP1!0.66!23.37!DRAP1;;chr10:28035112..28035130,-!p5@MKX!0.66!3.56!MKX;;chr7:27192185..27192209,-!p1@HOXA3!0.66!3.56!HOXA3;;chr15:96873984..96873999,+!p3@NR2F2!0.65!29.89!NR2F2;;chr10:63809134..63809145,+!p6@ARID5B!0.65!8.86!ARID5B;;chr2:166326200..166326216,+!p1@CSRNP3!0.65!5.39!CSRNP3;;chr11:65667846..65667868,-!p1@FOSL1!0.64!105.13!FOSL1;;chr12:66218923..66218934,+!p14@HMGA2!0.64!3.39!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.64!3.39!HMGA2;;chr2:66662396..66662407,+!p4@MEIS1!0.64!3.39!MEIS1;;chr6:10412576..10412599,-!p5@TFAP2A!0.64!3.39!TFAP2A;;chr17:17726907..17726958,-!p2@SREBF1!0.63!23.98!SREBF1;;chr14:73360799..73360817,-!p1@DPF3!0.63!13.03!DPF3;;chr10:28032421..28032494,-!p2@MKX!0.63!3.30!MKX;;chr10:28035133..28035148,-!p3@MKX!0.63!3.30!MKX;;chr1:170632439..170632465,+!p11@PRRX1!0.63!3.30!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.63!3.30!PRRX1;;chr6:34204672..34204692,+!p1@HMGA1!0.62!427.64!HMGA1;;chr18:72922811..72922827,+!p1@TSHZ1!0.62!18.59!TSHZ1;;chr15:83953397..83953425,-!p1@BNC1!0.62!3.74!BNC1;;chr17:59533618..59533656,+!p2@TBX4!0.62!3.21!TBX4;;chr7:27205136..27205164,-!p1@HOXA9!0.62!3.13!HOXA9;;chr12:114843852..114843867,-!p3@TBX5!0.62!3.13!TBX5;;chr12:53625846..53625861,-!p6@RARG!0.62!3.13!RARG;;chr3:157824001..157824078,-!p2@SHOX2!0.62!3.13!SHOX2;;chr3:12329397..12329433,+!p2@PPARG!0.61!7.91!PPARG;;chr12:66218443..66218461,+!p8@HMGA2!0.61!4.08!HMGA2;;chr17:1958388..1958404,+!p1@HIC1!0.60!22.59!HIC1;;chr15:37392724..37392757,-!p1@MEIS2!0.60!16.07!MEIS2;;chr16:79634624..79634642,-!p1@MAF!0.60!13.81!MAF;;chr7:42276787..42276815,-!p1@GLI3!0.60!9.12!GLI3;;chr3:24536253..24536328,-!p1@THRB!0.60!6.34!THRB;;chr15:96874063..96874074,+!p10@NR2F2!0.60!6.17!NR2F2;;chr11:65686952..65686975,+!p5@DRAP1!0.59!19.03!DRAP1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.59!3.13!GLIS1;;chr5:50679228..50679288,+!p1@ISL1!0.59!2.87!ISL1;;chr9:16870710..16870763,-!p1@BNC2!0.58!5.39!BNC2;;chrX:66763815..66763854,+!p2@AR!0.58!3.91!AR;;chr19:45260775..45260838,+!p5@BCL3!0.58!3.91!BCL3;;chr10:31607702..31607755,+!p3@ZEB1!0.58!3.39!ZEB1;;chr10:31607811..31607837,+!p6@ZEB1!0.58!2.78!ZEB1;;chr11:46299186..46299195,+!p3@CREB3L1!0.57!3.13!CREB3L1;;chr1:119530493..119530572,-!p1@TBX15!0.57!2.69!TBX15;;chr1:170632310..170632321,+!p15@PRRX1!0.57!2.69!PRRX1;;chr2:145277640..145277771,-!p1@ZEB2!0.56!44.48!ZEB2;;chr3:114343768..114343822,-!p1@ZBTB20!0.56!13.99!ZBTB20;;chr21:30671690..30671762,+!p2@BACH1!0.56!10.60!BACH1;;chr15:96874244..96874259,+!p5@NR2F2!0.56!7.47!NR2F2;;chr11:46299443..46299459,+!p4@CREB3L1!0.56!2.61!CREB3L1;;chr7:27196267..27196311,-!p1@HOXA7!0.56!2.61!HOXA7;;chr8:49833978..49833996,-!p1@SNAI2!0.55!65.86!SNAI2;;chr3:178789522..178789564,-!p2@ZMAT3!0.55!23.11!ZMAT3;;chr12:53625966..53626012,-!p2@RARG!0.55!7.99!RARG;;chr4:81105027..81105039,+!p3@PRDM8!0.55!3.13!PRDM8;;chr18:53068911..53068935,-!p4@TCF4!0.55!2.95!TCF4;;chr8:93107451..93107468,-!p2@RUNX1T1!0.55!2.52!RUNX1T1;;chr2:66662510..66662521,+!p6@MEIS1!0.55!2.52!MEIS1;;chr12:115122262..115122271,-!p7@TBX3!0.55!2.52!TBX3;;chr2:46524537..46524553,+!p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207..88969218,-!p7@ZCCHC6!0.16!0.43!ZCCHC6;;chrX:131622988..131623006,-!p8@MBNL3!0.16!0.43!MBNL3;;chr9:16871214..16871260,-!p11@BNC2!0.16!0.43!BNC2;;chr10:131635619..131635623,-!p6@EBF3!0.16!0.43!EBF3;;chr10:131762589..131762601,-!p3@EBF3!0.16!0.43!EBF3;;chr10:63853479..63853496,+!p21@ARID5B!0.16!0.43!ARID5B;;chr10:64133934..64133954,+!p6@ZNF365!0.16!0.43!ZNF365;;chr11:46333883..46333900,+!p8@CREB3L1!0.16!0.43!CREB3L1;;chr11:65668011..65668020,-!p3@FOSL1!0.16!0.43!FOSL1;;chr12:10871049..10871064,-!p19@CSDA!0.16!0.43!CSDA;;chr12:115122297..115122302,-!p15@TBX3!0.16!0.43!TBX3;;chr12:2968536..2968539,-!p3@FOXM1!0.16!0.43!FOXM1;;chr12:54366894..54366922,+!p2@HOXC11!0.16!0.43!HOXC11;;chr12:54378984..54378996,+!p7@HOXC10!0.16!0.43!HOXC10;;chr12:54379745..54379749,+!p6@HOXC5!0.16!0.43!HOXC5;;chr12:54394416..54394467,+!p5@HOXC9!0.16!0.43!HOXC9;;chr12:66218037..66218042,+!p18@HMGA2!0.16!0.43!HMGA2;;chr12:66218413..66218418,+!p17@HMGA2!0.16!0.43!HMGA2;;chr12:66357586..66357600,+!p20@HMGA2!0.16!0.43!HMGA2;;chr5:124082525..124082536,-!p10@ZNF608!0.16!0.43!ZNF608;;chr5:174151612..174151633,+!p2@MSX2!0.16!0.43!MSX2;;chr5:322733..322758,+!p2@AHRR!0.16!0.43!AHRR;;chr7:150945865..150945896,-!p4@SMARCD3!0.16!0.43!SMARCD3;;chr8:30890810..30890880,-!p1@PURG!0.16!0.43!PURG;;chr8:72756194..72756208,-!p9@MSC!0.16!0.43!MSC;;chr8:93115445..93115462,-!p7@RUNX1T1!0.16!0.43!RUNX1T1;;chr9:100616439..100616476,+!p3@FOXE1!0.16!0.43!FOXE1;;chr22:41763452..41763466,+!p2@TEF!0.16!0.43!TEF;;chr2:102091478..102091490,-!p3@RFX8!0.16!0.43!RFX8;;chr2:102091514..102091528,-!p6@RFX8!0.16!0.43!RFX8;;chr2:200323212..200323223,-!p8@SATB2!0.16!0.43!SATB2;;chr2:46612891..46612907,+!p10@EPAS1!0.16!0.43!EPAS1;;chr2:74726710..74726736,-!p3@LBX2!0.16!0.43!LBX2;;chr3:114343039..114343085,-!p8@ZBTB20!0.16!0.43!ZBTB20;;chr3:128212033..128212051,-!p1@GATA2!0.16!0.43!GATA2;;chr3:147110055..147110129,-!p1@ZIC4!0.16!0.43!ZIC4;;chr3:157824202..157824211,-!p3@SHOX2!0.16!0.43!SHOX2;;chr3:44596664..44596672,+!p2@ZNF167!0.16!0.43!ZNF167;;chr4:26322673..26322684,+!p11@RBPJ!0.16!0.43!RBPJ;;chr15:61521462..61521482,-!p4@RORA!0.16!0.43!RORA;;chr15:96869394..96869405,+!p25@NR2F2!0.16!0.43!NR2F2;;chr16:49698178..49698209,-!p1@ZNF423!0.16!0.43!ZNF423;;chr16:79633883..79633892,-!p6@MAF!0.16!0.43!MAF;;chr16:86612046..86612065,+!p3@FOXL1!0.16!0.43!FOXL1;;chr17:38487563..38487578,+!p10@RARA!0.16!0.43!RARA;;chr19:12267492..12267505,-!p2@ZNF625,p3@ZNF20!0.16!0.43!ZNF625;;chr19:13135832..13135853,+!p16@NFIX!0.16!0.43!NFIX;;chr19:13136057..13136085,+!p11@NFIX!0.16!0.43!NFIX;;chr19:19976620..19976631,+!p4@ZNF253!0.16!0.43!ZNF253;;chr19:50542543..50542548,+!p2@ZNF473!0.16!0.43!ZNF473;;chr1:110613276..110613299,-!p2@ALX3!0.16!0.43!ALX3;;chr1:212873200..212873230,-!p5@BATF3!0.16!0.43!BATF3;;chr1:23694532..23694549,-!p8@ZNF436!0.16!0.43!ZNF436;;chr1:8586084..8586100,-!p20@RERE!0.16!0.43!RERE;;chr21:36259830..36259842,-!p30@RUNX1!0.16!0.43!RUNX1;;chr6:34204642..34204664,+!p2@HMGA1!0.15!171.07!HMGA1;;chr2:231280908..231280945,+!p1@SP100!0.15!49.44!SP100;;chr12:12764773..12764852,+!p1@CREBL2!0.15!31.80!CREBL2;;chr10:114709999..114710031,+!p1@TCF7L2!0.15!30.15!TCF7L2;;chr12:51157837..51157892,+!p1@ATF1!0.15!27.46!ATF1;;chr4:76439665..76439699,+!p1@THAP6!0.15!17.20!THAP6;;chr11:10879572..10879591,-!p2@ZBED5!0.15!16.59!ZBED5;;chr17:7387524..7387597,-!p1@ZBTB4!0.15!11.38!ZBTB4;;chr19:53193731..53193767,-!p1@ZNF83!0.15!10.86!ZNF83;;chr19:18392236..18392248,-!p2@JUND!0.15!7.73!JUND;;chr10:104155480..104155534,+!p2@NFKB2!0.15!7.56!NFKB2;;
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11249-116E7: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:19, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0