FF:11322-117D8: Difference between revisions

Revision as of 20:37, 9 July 2012

Name:	Myoblast, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skeletal muscle
dev stage	21 years old adult
sex	male
age	21
cell type	skeletal muscle myoblast
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	SKM2
catalog number	SC3525
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0892
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.0537
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.261
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.209
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0747
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0596
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0146
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.349
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.341
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.521
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.209
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.422
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0314
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0812
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0812
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	5.693473e-4
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0297
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.209
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0812
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0812
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.891
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.349
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.15
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.422
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0486
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.867
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11965

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.086
MA0003.1	MA0003.1	0.528
MA0004.1	MA0004.1	0.79
MA0006.1	MA0006.1	0.0309
MA0007.1	MA0007.1	0.0483
MA0009.1	MA0009.1	0.221
MA0014.1	MA0014.1	0.395
MA0017.1	MA0017.1	0.626
MA0018.2	MA0018.2	6.22989e-5
MA0019.1	MA0019.1	0.825
MA0024.1	MA0024.1	0.114
MA0025.1	MA0025.1	7.76347e-6
MA0027.1	MA0027.1	0.924
MA0028.1	MA0028.1	0.755
MA0029.1	MA0029.1	0.523
MA0030.1	MA0030.1	0.00222
MA0031.1	MA0031.1	0.0236
MA0035.2	MA0035.2	5.8786e-4
MA0038.1	MA0038.1	0.0505
MA0039.2	MA0039.2	0.0102
MA0040.1	MA0040.1	0.508
MA0041.1	MA0041.1	0.283
MA0042.1	MA0042.1	0.156
MA0043.1	MA0043.1	1.00173e-6
MA0046.1	MA0046.1	0.283
MA0047.2	MA0047.2	0.133
MA0048.1	MA0048.1	0.0727
MA0050.1	MA0050.1	0.00674
MA0051.1	MA0051.1	0.0247
MA0052.1	MA0052.1	0.0511
MA0055.1	MA0055.1	0.728
MA0057.1	MA0057.1	0.63
MA0058.1	MA0058.1	0.708
MA0059.1	MA0059.1	0.663
MA0060.1	MA0060.1	8.60254e-9
MA0061.1	MA0061.1	0.00363
MA0062.2	MA0062.2	8.39738e-4
MA0065.2	MA0065.2	0.274
MA0066.1	MA0066.1	0.206
MA0067.1	MA0067.1	0.0033
MA0068.1	MA0068.1	0.171
MA0069.1	MA0069.1	0.341
MA0070.1	MA0070.1	0.474
MA0071.1	MA0071.1	0.832
MA0072.1	MA0072.1	0.264
MA0073.1	MA0073.1	0.867
MA0074.1	MA0074.1	0.0881
MA0076.1	MA0076.1	0.687
MA0077.1	MA0077.1	0.646
MA0078.1	MA0078.1	0.456
MA0079.2	MA0079.2	0.775
MA0080.2	MA0080.2	2.77344e-10
MA0081.1	MA0081.1	0.024
MA0083.1	MA0083.1	0.107
MA0084.1	MA0084.1	0.122
MA0087.1	MA0087.1	0.503
MA0088.1	MA0088.1	0.239
MA0090.1	MA0090.1	0.0117
MA0091.1	MA0091.1	0.0971
MA0092.1	MA0092.1	0.898
MA0093.1	MA0093.1	0.833
MA0099.2	MA0099.2	0.0124
MA0100.1	MA0100.1	0.556
MA0101.1	MA0101.1	5.00857e-6
MA0102.2	MA0102.2	0.235
MA0103.1	MA0103.1	0.00166
MA0104.2	MA0104.2	0.251
MA0105.1	MA0105.1	0.318
MA0106.1	MA0106.1	0.414
MA0107.1	MA0107.1	1.15444e-6
MA0108.2	MA0108.2	0.408
MA0111.1	MA0111.1	0.152
MA0112.2	MA0112.2	0.0787
MA0113.1	MA0113.1	0.415
MA0114.1	MA0114.1	0.492
MA0115.1	MA0115.1	0.398
MA0116.1	MA0116.1	0.658
MA0117.1	MA0117.1	0.323
MA0119.1	MA0119.1	0.0124
MA0122.1	MA0122.1	0.427
MA0124.1	MA0124.1	0.294
MA0125.1	MA0125.1	0.501
MA0131.1	MA0131.1	0.403
MA0135.1	MA0135.1	0.79
MA0136.1	MA0136.1	1.56739e-11
MA0137.2	MA0137.2	0.0976
MA0138.2	MA0138.2	0.294
MA0139.1	MA0139.1	0.668
MA0140.1	MA0140.1	0.00449
MA0141.1	MA0141.1	0.173
MA0142.1	MA0142.1	0.00851
MA0143.1	MA0143.1	0.556
MA0144.1	MA0144.1	0.448
MA0145.1	MA0145.1	0.47
MA0146.1	MA0146.1	0.717
MA0147.1	MA0147.1	0.533
MA0148.1	MA0148.1	0.145
MA0149.1	MA0149.1	0.491
MA0150.1	MA0150.1	0.0254
MA0152.1	MA0152.1	0.181
MA0153.1	MA0153.1	0.934
MA0154.1	MA0154.1	0.503
MA0155.1	MA0155.1	0.658
MA0156.1	MA0156.1	2.66152e-8
MA0157.1	MA0157.1	0.323
MA0159.1	MA0159.1	0.586
MA0160.1	MA0160.1	0.189
MA0162.1	MA0162.1	0.375
MA0163.1	MA0163.1	0.0917
MA0164.1	MA0164.1	0.362
MA0258.1	MA0258.1	0.988
MA0259.1	MA0259.1	0.851

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11965

Novel motif	Logo	P-value
1	1	0.699
10	10	0.0319
100	100	0.914
101	101	0.651
102	102	0.965
103	103	0.514
104	104	0.596
105	105	0.011
106	106	0.219
107	107	0.161
108	108	0.51
109	109	0.788
11	11	0.968
110	110	0.304
111	111	0.715
112	112	0.273
113	113	0.919
114	114	0.535
115	115	0.0693
116	116	0.0692
117	117	0.125
118	118	0.459
119	119	0.665
12	12	0.616
120	120	0.0785
121	121	0.809
122	122	0.0029
123	123	0.118
124	124	0.0327
125	125	0.97
126	126	0.96
127	127	0.8
128	128	0.956
129	129	0.383
13	13	0.834
130	130	0.81
131	131	0.627
132	132	0.532
133	133	0.817
134	134	0.831
135	135	0.613
136	136	0.0851
137	137	0.106
138	138	0.308
139	139	0.673
14	14	0.197
140	140	0.146
141	141	0.113
142	142	0.905
143	143	0.707
144	144	0.587
145	145	0.324
146	146	0.368
147	147	0.207
148	148	0.69
149	149	0.243
15	15	0.556
150	150	0.842
151	151	0.784
152	152	0.232
153	153	0.573
154	154	0.779
155	155	0.0449
156	156	0.41
157	157	0.289
158	158	0.00345
159	159	0.378
16	16	0.0576
160	160	0.683
161	161	0.482
162	162	0.185
163	163	0.962
164	164	0.44
165	165	0.413
166	166	0.193
167	167	0.983
168	168	0.859
169	169	0.17
17	17	0.749
18	18	0.995
19	19	0.024
2	2	0.844
20	20	0.86
21	21	0.0342
22	22	0.34
23	23	0.847
24	24	0.532
25	25	0.273
26	26	0.7
27	27	0.888
28	28	0.283
29	29	0.51
3	3	0.527
30	30	0.533
31	31	0.753
32	32	2.65898e-8
33	33	0.96
34	34	0.279
35	35	0.957
36	36	0.0185
37	37	0.072
38	38	0.557
39	39	0.219
4	4	0.0427
40	40	0.0326
41	41	0.157
42	42	0.316
43	43	0.713
44	44	0.205
45	45	0.463
46	46	0.57
47	47	0.491
48	48	0.705
49	49	0.281
5	5	0.496
50	50	0.428
51	51	0.751
52	52	0.324
53	53	0.0631
54	54	0.984
55	55	0.122
56	56	0.905
57	57	0.929
58	58	0.227
59	59	0.285
6	6	0.265
60	60	0.128
61	61	0.428
62	62	0.687
63	63	0.189
64	64	0.296
65	65	0.961
66	66	0.203
67	67	0.924
68	68	0.307
69	69	0.721
7	7	0.305
70	70	0.518
71	71	0.411
72	72	0.259
73	73	0.00846
74	74	0.214
75	75	0.504
76	76	0.412
77	77	0.0835
78	78	0.907
79	79	0.0733
8	8	0.249
80	80	0.0145
81	81	0.645
82	82	0.832
83	83	0.585
84	84	0.643
85	85	0.513
86	86	0.243
87	87	0.0756
88	88	0.961
89	89	0.871
9	9	0.936
90	90	0.482
91	91	0.601
92	92	0.675
93	93	0.671
94	94	0.985
95	95	0.942
96	96	0.447
97	97	0.965
98	98	0.166
99	99	0.00574

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11965

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000164 human skeletal muscle myoblast sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000055 (non-terminally differentiated cell)
0000003 (native cell)
0000548 (animal cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000515 (skeletal muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000164 (human skeletal muscle myoblast sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000515 (skeletal muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr12:81110684..81110700,+!p1@MYF5!1.98!94.11!MYF5;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.60!38.63!HOXC5;;chr7:19157248..19157268,-!p1@TWIST1!1.51!84.86!TWIST1;;chr14:61116183..61116208,-!p1@SIX1!1.48!107.26!SIX1;;chr12:66218255..66218304,+!p3@HMGA2!1.46!73.36!HMGA2;;chr1:170632285..170632309,+!p1@PRRX1!1.40!26.92!PRRX1;;chr12:54379029..54379057,+!p2@HOXC10!1.38!23.22!HOXC10;;chr12:66218836..66218888,+!p1@HMGA2!1.32!181.85!HMGA2;;chr16:86600426..86600441,+!p1@FOXC2!1.31!47.26!FOXC2;;chr7:27224842..27224872,-!p1@HOXA11!1.27!17.67!HOXA11;;chr12:54378923..54378966,+!p1@HOXC10!1.25!16.64!HOXC10;;chr12:66218598..66218645,+!p2@HMGA2!1.23!72.53!HMGA2;;chr1:40105299..40105326,-!p1@HEYL!1.23!15.82!HEYL;;chr22:19748231..19748317,+!p1@TBX1!1.20!14.79!TBX1;;chr12:66218904..66218913,+!p11@HMGA2!1.18!14.18!HMGA2;;chr7:27192185..27192209,-!p1@HOXA3!1.18!13.97!HOXA3;;chr11:17741111..17741124,+!p1@MYOD1!1.14!12.74!MYOD1;;chr12:66218923..66218934,+!p14@HMGA2!1.13!12.53!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!1.12!17.67!HMGA2;;chr17:48072574..48072597,-!p1@DLX3!1.12!12.12!DLX3;;chr7:27224795..27224840,-!p2@HOXA11!1.08!11.10!HOXA11;;chr6:34204921..34204939,+!p3@HMGA1!1.06!319.93!HMGA1;;chr19:13134772..13134822,+!p2@NFIX!1.05!15.21!NFIX;;chr12:54332608..54332636,+!p1@HOXC13!1.04!10.07!HOXC13;;chr12:54366975..54367001,+!p1@HOXC11!1.04!9.86!HOXC11;;chr1:170633348..170633399,+!p2@PRRX1!1.03!13.36!PRRX1;;chr5:92918919..92918942,+!p1@NR2F1!1.01!42.53!NR2F1;;chr12:66218183..66218209,+!p4@HMGA2!1.00!17.67!HMGA2;;chr9:77112244..77112262,+!p1@RORB!0.98!9.66!RORB;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.97!8.84!GLIS1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.97!8.42!HOXC5;;chr12:53614115..53614154,-!p1@RARG!0.95!43.36!RARG;;chr11:113930425..113930471,+!p1@ZBTB16!0.95!11.71!ZBTB16;;chr1:170633262..170633285,+!p3@PRRX1!0.95!9.04!PRRX1;;chr6:100912785..100912822,-!p1@SIM1!0.95!8.01!SIM1;;chr2:19558373..19558392,-!p1@OSR1!0.94!21.58!OSR1;;chr11:65686802..65686818,+!p6@DRAP1!0.94!13.56!DRAP1;;chr1:170632959..170632987,+!p4@PRRX1!0.94!8.42!PRRX1;;chr14:37131058..37131139,+!p1@PAX9!0.93!7.60!PAX9;;chr2:223163706..223163730,-!p1@PAX3!0.92!7.40!PAX3;;chr2:85981107..85981120,+!p3@ATOH8!0.91!7.19!ATOH8;;chr14:61116168..61116180,-!p2@SIX1!0.90!8.01!SIX1;;chr2:45236540..45236577,-!p1@SIX2!0.90!6.99!SIX2;;chr12:54393880..54393962,+!p1@HOXC9!0.88!6.58!HOXC9;;chr6:1312325..1312340,+!p1@FOXQ1!0.87!10.68!FOXQ1;;chr12:115122318..115122331,-!p2@TBX3!0.87!6.37!TBX3;;chr11:65686732..65686756,+!p2@DRAP1!0.86!27.74!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!0.86!25.68!FOSL1;;chr12:54366949..54366973,+!p3@HOXC11!0.86!6.16!HOXC11;;chr1:170632250..170632277,+!p7@PRRX1!0.86!6.16!PRRX1;;chr10:131762504..131762555,-!p1@EBF3!0.84!5.96!EBF3;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.96!KDM5D;;chr6:100912752..100912778,-!p2@SIM1!0.84!5.96!SIM1;;chr11:65687362..65687436,+!p3@DRAP1!0.83!28.15!DRAP1;;chr5:321810..321877,+!p1@AHRR!0.83!19.31!AHRR;;chr12:66357214..66357233,+!p13@HMGA2!0.83!5.75!HMGA2;;chr8:77593474..77593612,+!p1@ZFHX4!0.82!25.27!ZFHX4;;chr7:27205106..27205134,-!p2@HOXA9!0.82!5.55!HOXA9;;chr8:49833948..49833973,-!p2@SNAI2!0.81!37.60!SNAI2;;chr11:46299199..46299233,+!p1@CREB3L1!0.81!30.00!CREB3L1;;chr3:21792585..21792625,-!p2@ZNF385D!0.81!6.16!ZNF385D;;chr12:115121962..115121987,-!p1@TBX3!0.80!48.49!TBX3;;chr21:36421535..36421610,-!p2@RUNX1!0.80!20.34!RUNX1;;chr16:86600870..86600921,+!p2@FOXC2!0.80!5.34!FOXC2;;chr2:172967242..172967265,-!p2@DLX2!0.80!5.34!DLX2;;chr14:62162258..62162269,+!p2@HIF1A!0.79!54.66!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!0.78!28.56!HIF1A;;chr11:113930291..113930339,+!p2@ZBTB16!0.78!8.63!ZBTB16;;chr12:66218378..66218401,+!p6@HMGA2!0.78!8.01!HMGA2;;chr5:158526917..158526932,-!p1@EBF1!0.77!13.15!EBF1;;chr12:66218443..66218461,+!p8@HMGA2!0.77!6.37!HMGA2;;chr2:119605214..119605230,-!p1@EN1!0.77!4.93!EN1;;chr4:111544219..111544240,-!p1@PITX2!0.77!4.93!PITX2;;chr7:19157043..19157088,-!p2@TWIST1!0.76!12.95!TWIST1;;chr4:111558135..111558198,-!p2@PITX2!0.76!4.73!PITX2;;chr20:39946361..39946379,-!p2@ZHX3!0.75!14.79!ZHX3;;chr2:239756671..239756732,+!p1@TWIST2!0.74!15.82!TWIST2;;chr2:85980951..85981004,+!p1@ATOH8!0.74!7.81!ATOH8;;chr2:85981073..85981091,+!p5@ATOH8!0.74!4.52!ATOH8;;chr12:66218420..66218439,+!p12@HMGA2!0.74!4.52!HMGA2;;chr16:86601052..86601066,+!p4@FOXC2!0.74!4.52!FOXC2;;chr11:17741254..17741282,+!p2@MYOD1!0.73!4.32!MYOD1;;chr12:54380036..54380091,+!p4@HOXC10!0.73!4.32!HOXC10;;chr1:8934931..8934947,-!p4@ENO1!0.72!15.41!ENO1;;chr15:57511609..57511651,+!p2@TCF12!0.72!7.60!TCF12;;chr12:115122005..115122016,-!p3@TBX3!0.72!5.14!TBX3;;chr16:86600458..86600461,+!p3@FOXC2!0.71!4.11!FOXC2;;chr1:8926441..8926473,-!p10@ENO1!0.70!6.37!ENO1;;chr5:92918860..92918871,+!p10@NR2F1!0.70!4.52!NR2F1;;chr8:49833978..49833996,-!p1@SNAI2!0.69!92.88!SNAI2;;chr5:92918768..92918783,+!p8@NR2F1!0.69!3.90!NR2F1;;chr1:170633058..170633084,+!p5@PRRX1!0.69!3.90!PRRX1;;chr12:54332687..54332701,+!p3@HOXC13!0.69!3.90!HOXC13;;chr12:54367012..54367025,+!p5@HOXC11!0.69!3.90!HOXC11;;chrY:2803415..2803468,+!p1@ZFY!0.69!3.90!ZFY;;chr2:85980919..85980942,+!p4@ATOH8!0.68!4.11!ATOH8;;chr2:214015111..214015179,-!p1@IKZF2!0.67!7.19!IKZF2;;chr10:31607702..31607755,+!p3@ZEB1!0.67!4.32!ZEB1;;chr12:66358080..66358094,+!p15@HMGA2!0.67!3.70!HMGA2;;chr7:27205136..27205164,-!p1@HOXA9!0.67!3.70!HOXA9;;chr1:170632477..170632506,+!p6@PRRX1!0.67!3.70!PRRX1;;chr2:85981008..85981025,+!p7@ATOH8!0.67!3.70!ATOH8;;chr19:13136130..13136165,+!p6@NFIX!0.66!4.93!NFIX;;chr11:65687222..65687240,+!p7@DRAP1!0.66!4.73!DRAP1;;chr11:65667846..65667868,-!p1@FOSL1!0.65!106.64!FOSL1;;chr4:26322267..26322334,+!p3@RBPJ!0.65!9.45!RBPJ;;chr3:12330560..12330579,+!p1@PPARG!0.65!4.11!PPARG;;chr5:92918956..92918969,+!p4@NR2F1!0.65!3.90!NR2F1;;chr2:5832508..5832524,+!p1@SOX11!0.65!3.49!SOX11;;chr2:85981027..85981047,+!p8@ATOH8!0.65!3.49!ATOH8;;chr1:44513995..44514031,+!p1@KLF17!0.65!3.49!KLF17;;chr13:74708029..74708077,-!p2@KLF12!0.64!10.89!KLF12;;chr15:42749722..42749739,-!p2@ZFP106!0.64!6.58!ZFP106;;chrX:66763856..66763896,+!p1@AR!0.64!5.14!AR;;chr9:16870659..16870675,-!p2@BNC2!0.64!4.32!BNC2;;chr6:85474299..85474324,-!p1@TBX18!0.63!6.37!TBX18;;chr6:85473156..85473210,-!p2@TBX18!0.63!4.11!TBX18;;chr15:83953397..83953425,-!p1@BNC1!0.63!3.90!BNC1;;chr12:115122303..115122314,-!p6@TBX3!0.63!3.29!TBX3;;chr1:119530493..119530572,-!p1@TBX15!0.63!3.29!TBX15;;chr20:30193083..30193098,+!p1@ID1!0.62!311.09!ID1;;chr11:65687158..65687216,+!p4@DRAP1!0.62!21.37!DRAP1;;chr12:96588219..96588263,+!p2@ELK3!0.61!26.30!ELK3;;chr21:47063625..47063658,+!p1@PCBP3!0.61!15.82!PCBP3;;chr9:73029219..73029289,-!p2@KLF9!0.61!10.68!KLF9;;chr2:85981222..85981259,+!p2@ATOH8!0.61!5.55!ATOH8;;chr12:66218573..66218596,+!p7@HMGA2!0.61!4.93!HMGA2;;chr12:115121802..115121814,-!p5@TBX3!0.61!3.08!TBX3;;chr16:86612046..86612065,+!p3@FOXL1!0.61!3.08!FOXL1;;chr16:86612320..86612394,+!p1@FOXL1!0.61!3.08!FOXL1;;chr19:2867325..2867348,+!p1@ZNF556!0.61!3.08!ZNF556;;chr3:21792682..21792720,-!p1@ZNF385D!0.61!3.08!ZNF385D;;chr5:92918894..92918912,+!p2@NR2F1!0.60!11.51!NR2F1;;chr13:73633131..73633149,+!p1@KLF5!0.59!37.19!KLF5;;chr17:59477233..59477263,+!p1@TBX2!0.59!10.48!TBX2;;chr2:85980868..85980880,+!p12@ATOH8!0.59!2.88!ATOH8;;chr3:147127142..147127168,+!p1@ZIC1!0.59!2.88!ZIC1;;chrY:21906761..21906810,-!p2@KDM5D!0.59!2.88!KDM5D;;chr11:17741084..17741094,+!p3@MYOD1!0.59!2.88!MYOD1;;chr12:54402745..54402788,+!p1@HOXC8!0.59!2.88!HOXC8;;chr1:170632137..170632172,+!p10@PRRX1!0.59!2.88!PRRX1;;chr1:170632439..170632465,+!p11@PRRX1!0.59!2.88!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.59!2.88!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.59!2.88!PRRX1;;chr12:96588143..96588185,+!p1@ELK3!0.58!41.92!ELK3;;chr5:137804484..137804498,+!p2@EGR1!0.58!13.56!EGR1;;chr6:34204672..34204692,+!p1@HMGA1!0.57!380.54!HMGA1;;chr3:114343768..114343822,-!p1@ZBTB20!0.57!14.38!ZBTB20;;chr14:62203595..62203676,+!p4@HIF1A!0.57!5.75!HIF1A;;chr2:239756739..239756755,+!p2@TWIST2!0.57!5.14!TWIST2;;chr7:113726357..113726443,+!p1@FOXP2!0.57!5.14!FOXP2;;chr5:92919100..92919135,+!p3@NR2F1!0.57!3.49!NR2F1;;chr1:23885981..23886002,-!p1@ID3!0.56!580.27!ID3;;chr14:61191018..61191048,-!p1@SIX4!0.56!6.58!SIX4;;chr5:178368186..178368238,+!p1@ZNF454!0.56!5.34!ZNF454;;chr5:92919452..92919496,+!p11@NR2F1!0.56!2.67!NR2F1;;chr6:152011654..152011682,+!p1@ESR1!0.56!2.67!ESR1;;chr8:77593750..77593757,+!p3@ZFHX4!0.56!2.67!ZFHX4;;chr16:86601088..86601105,+!p5@FOXC2!0.56!2.67!FOXC2;;chr11:113930401..113930422,+!p3@ZBTB16!0.56!2.67!ZBTB16;;chr12:54378984..54378996,+!p7@HOXC10!0.56!2.67!HOXC10;;chr12:54379745..54379749,+!p6@HOXC5!0.56!2.67!HOXC5;;chr9:77112225..77112238,+!p2@RORB!0.56!2.67!RORB;;chr2:208030647..208030689,-!p1@KLF7!0.55!26.92!KLF7;;chr5:133450365..133450444,+!p1@TCF7!0.55!14.18!TCF7;;chr12:57504975..57505019,-!p2@STAT6!0.55!12.53!STAT6;;chr16:54320646..54320672,-!p2@IRX3!0.55!4.32!IRX3;;chr11:65687243..65687276,+!p8@DRAP1!0.55!3.70!DRAP1;;chr8:128748308..128748324,+!p2@MYC!0.54!86.71!MYC;;chr12:96588368..96588394,+!p3@ELK3!0.54!7.81!ELK3;;chr3:12329397..12329433,+!p2@PPARG!0.54!6.58!PPARG;;chr2:200322654..200322707,-!p2@SATB2!0.54!3.90!SATB2;;chr17:46622440..46622477,-!p5@HOXB2!0.54!2.88!HOXB2;;chr12:54366894..54366922,+!p2@HOXC11!0.54!2.47!HOXC11;;chr19:46801639..46801699,+!p1@HIF3A!0.54!2.47!HIF3A;;chr2:113994526..113994556,-!p3@PAX8!0.54!2.47!PAX8;;chr2:172967276..172967296,-!p3@DLX2!0.54!2.47!DLX2;;chr7:27213893..27213954,-!p1@HOXA10!0.54!2.47!HOXA10;;chr2:145275162..145275202,-!p2@ZEB2!0.53!17.67!ZEB2;;chr2:71127699..71127744,+!p1@VAX2!0.53!5.75!VAX2;;chr11:46299539..46299620,+!p2@CREB3L1!0.53!4.52!CREB3L1;;chr5:92920456..92920488,+!p9@NR2F1!0.53!2.88!NR2F1;;chr19:13106214..13106382,+!p1@NFIX!0.52!70.07!NFIX;;chr16:79634624..79634642,-!p1@MAF!0.52!11.30!MAF;;chrX:66763815..66763854,+!p2@AR!0.52!3.29!AR;;chr14:62213827..62213853,+!p6@HIF1A!0.51!3.49!HIF1A;;chr1:214161272..214161322,+!p1@PROX1!0.51!3.49!PROX1;;chr16:5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36328,-!p1@THRB!0.19!1.85!THRB;;chr4:56413067..56413086,-!p4@CLOCK!0.19!1.64!CLOCK;;chr21:34143999..34144016,-!p4@GCFC1!0.19!1.64!GCFC1;;chr16:8962202..8962222,-!p3@CARHSP1!0.19!1.64!CARHSP1;;chr19:20150029..20150078,-!p3@ZNF682!0.19!1.64!ZNF682;;chr19:44331461..44331482,+!p3@ZNF283!0.19!1.44!ZNF283;;chrX:119384566..119384585,+!p2@ZBTB33!0.19!1.44!ZBTB33;;chr6:21594845..21594908,+!p6@SOX4!0.19!1.44!SOX4;;chr6:21597370..21597408,+!p5@SOX4!0.19!1.44!SOX4;;chr8:60031682..60031710,-!p2@TOX!0.19!1.44!TOX;;chr15:57210795..57210809,+!p8@TCF12!0.19!1.23!TCF12;;chr19:3366625..3366629,+!p4@NFIC!0.19!1.23!NFIC;;chr19:35417844..35417877,+!p2@ZNF30!0.19!1.23!ZNF30;;chr2:208030705..208030718,-!p7@KLF7!0.19!1.23!KLF7;;chr16:68573640..68573660,+!p3@ZFP90!0.19!1.03!ZFP90;;chr12:6782441..6782459,-!p8@ZNF384!0.19!1.03!ZNF384;;chr21:36260463..36260480,-!p9@RUNX1!0.19!1.03!RUNX1;;chr3:75834722..75834733,-!p2@ZNF717!0.19!0.82!ZNF717;;chr10:8095593..8095625,+!p3@GATA3!0.19!0.82!GATA3;;chr20:48807351..48807384,+!p1@CEBPB!0.18!142.19!CEBPB;;chr12:57505121..57505179,-!p1@STAT6!0.18!53.42!STAT6;;chr19:15543484..15543561,-!p1@WIZ!0.18!30.62!WIZ;;chr3:52001448..52001478,-!p2@PCBP4!0.18!18.29!PCBP4;;chr1:246729483..246729538,-!p2@TFB2M!0.18!12.33!TFB2M;;chr6:31126291..31126399,+!p1@TCF19!0.18!12.33!TCF19;;chr19:56879653..56879743,+!p1@ZNF542!0.18!9.45!ZNF542;;chr19:56152437..56152467,+!p3@ZNF580!0.18!6.37!ZNF580;;chr8:144766617..144766664,+!p1@ZNF707!0.18!6.16!ZNF707;;chr3:185826764..185826803,-!p2@ETV5!0.18!4.32!ETV5;;chr19:12405645..12405685,-!p1@ZNF44!0.18!4.11!ZNF44;;chr1:164528384..164528409,+!p3@PBX1!0.18!3.49!PBX1;;chr5:178487354..178487408,+!p1@ZNF354C!0.18!3.29!ZNF354C;;chr6:43337255..43337329,-!p2@ZNF318!0.18!3.08!ZNF318;;chr12:57919293..57919311,+!p3@MBD6!0.18!2.88!MBD6;;chr17:46621937..46621966,-!p2@HOXB2!0.18!2.88!HOXB2;;chr12:53848505..53848532,+!p4@PCBP2!0.18!2.26!PCBP2;;chr12:53614155..53614187,-!p3@RARG!0.18!1.85!RARG;;chr19:4065848..4065909,-!p4@ZBTB7A!0.18!1.85!ZBTB7A;;chr7:148823387..148823440,-!p1@ZNF425!0.18!1.64!ZNF425;;chr1:8483849..8483868,-!p14@RERE!0.18!1.44!RERE;;chr17:17723746..17723766,-!p5@SREBF1!0.18!1.44!SREBF1;;chr14:64971014..64971044,+!p4@ZBTB1!0.18!1.44!ZBTB1;;chr12:51566592..51566617,-!p3@TFCP2!0.18!1.23!TFCP2;;chr17:41622925..41622976,-!p3@ETV4!0.18!1.23!ETV4;;chr19:38042240..38042309,+!p2@ZNF540!0.18!1.23!ZNF540;;chr19:57019215..57019250,+!p1@ZNF471!0.18!1.23!ZNF471;;chr2:145282041..145282092,-!p8@ZEB2!0.18!1.23!ZEB2;;chr4:87928105..87928126,+!p13@AFF1!0.18!1.23!AFF1;;chr15:100106126..100106135,+!p6@MEF2A!0.18!1.03!MEF2A;;chr15:85291372..85291405,+!p3@ZNF592!0.18!1.03!ZNF592;;chr12:10865870..10865888,-!p6@CSDA!0.18!1.03!CSDA;;chr21:36260773..36260804,-!p7@RUNX1!0.18!1.03!RUNX1;;chr6:108882076..108882087,+!p6@FOXO3!0.18!0.82!FOXO3;;chr8:28243785..28243799,-!p6@ZNF395!0.18!0.82!ZNF395;;chr3:141121369..141121392,+!p14@ZBTB38!0.18!0.82!ZBTB38;;chr10:64134120..64134183,+!p1@ZNF365!0.18!0.82!ZNF365;;chr10:97890311..97890324,+!p6@ZNF518A!0.18!0.82!ZNF518A;;chr12:54447599..54447630,+!p3@HOXC4!0.18!0.82!HOXC4;;chr12:3068196..3068232,+!p9@TEAD4!0.18!0.62!TEAD4;;chr7:100076744..100076749,-!p8@TSC22D4!0.18!0.62!TSC22D4;;chr3:52008016..52008071,-!p1@ABHD14A-ACY1,p1@ABHD14B,p1@PCBP4!0.17!77.67!PCBP4;;chr22:41697520..41697613,+!p1@ZC3H7B!0.17!75.00!ZC3H7B;;chr7:137686791..137686821,-!p1@CREB3L2!0.17!38.63!CREB3L2;;chr13:115079949..115080022,+!p1@CHAMP1!0.17!36.78!CHAMP1;;chr10:51565239..51565263,+!p2@NCOA4!0.17!30.82!NCOA4;;chr10:63661437..63661465,+!p2@ARID5B!0.17!25.27!ARID5B;;chr9:94186101..94186122,-!p1@NFIL3!0.17!17.88!NFIL3;;chr7:17338266..17338282,+!p1@AHR!0.17!13.77!AHR;;chr16:29819403..29819442,+!p5@MAZ!0.17!10.27!MAZ;;chr12:124873852..124873881,-!p3@NCOR2!0.17!7.40!NCOR2;;chr21:27107259..27107299,+!p1@GABPA!0.17!7.19!GABPA;;chr14:100705335..100705360,+!p4@YY1!0.17!6.99!YY1;;chr14:74226747..74226779,-!p3@C14orf43!0.17!6.78!C14orf43;;chr3:69788576..69788648,+!p1@MITF!0.17!6.37!MITF;;chr18:45457004..45457043,-!p3@SMAD2!0.17!5.14!SMAD2;;chr17:5095126..5095169,-!p1@ZNF594!0.17!4.93!ZNF594;;chr19:12595586..12595637,-!p2@ZNF709!0.17!4.73!ZNF709;;chr19:11959532..11959593,+!p1@ZNF439!0.17!4.32!ZNF439;;chr19:58920000..58920057,+!p1@ZNF584!0.17!4.32!ZNF584;;chr19:56915668..56915732,+!p1@ZNF583!0.17!4.11!ZNF583;;chr3:52719546..52719636,-!p3@PBRM1!0.17!3.90!PBRM1;;chr9:20622444..20622468,-!p2@MLLT3!0.17!3.49!MLLT3;;chr8:182424..182462,+!p1@ZNF596!0.17!2.67!ZNF596;;chr18:3450293..3450304,+!p4@TGIF1!0.17!2.47!TGIF1;;chr14:35872453..35872485,-!p2@NFKBIA!0.17!2.47!NFKBIA;;chr17:38256973..38256990,-!p5@NR1D1!0.17!2.26!NR1D1;;chr1:23694697..23694756,-!p3@ZNF436!0.17!2.26!ZNF436;;chr15:41913412..41913456,+!p3@MGA!0.17!2.05!MGA;;chr18:3449720..3449749,+!p2@TGIF1!0.17!2.05!TGIF1;;chr12:56753939..56753951,-!p2@STAT2!0.17!2.05!STAT2;;chr14:64970427..64970457,+!p3@ZBTB1!0.17!1.85!ZBTB1;;chr11:57103312..57103321,-!p2@SSRP1!0.17!1.64!SSRP1;;chr5:142784101..142784130,-!p4@NR3C1!0.17!1.64!NR3C1;;chr15:96874063..96874074,+!p10@NR2F2!0.17!1.64!NR2F2;;chrX:76937934..76937974,-!p3@ATRX!0.17!1.23!ATRX;;chr4:56413104..56413117,-!p5@CLOCK!0.17!1.23!CLOCK;;chr5:134369905..134369972,-!p1@PITX1!0.17!1.23!PITX1;;chr8:145159277..145159282,+!p7@MAF1!0.17!1.23!MAF1;;chr1:35657082..35657099,-!p8@SFPQ!0.17!1.23!SFPQ;;chr19:45261992..45262010,+!p9@BCL3!0.17!1.03!BCL3;;chr19:52391220..52391251,-!p2@ZNF577!0.17!1.03!ZNF577;;chr10:98592776..98592796,+!p4@LCOR!0.17!1.03!LCOR;;chr19:18391652..18391669,-!p8@JUND!0.17!1.03!JUND;;chr6:108882364..108882391,+!p4@FOXO3!0.17!1.03!FOXO3;;chr4:185395191..185395226,-!p4@IRF2!0.17!1.03!IRF2;;chr2:66662895..66662907,+!p3@MEIS1!0.17!0.82!MEIS1;;chr11:706938..707008,-!p3@DEAF1!0.17!0.82!DEAF1;;chr11:8102819..8102845,+!p3@TUB!0.17!0.82!TUB;;chrX:152599653..152599662,+!p3@ZNF275!0.17!0.82!ZNF275;;chrX:76938351..76938379,-!p7@ATRX!0.17!0.82!ATRX;;chr1:42671469..42671496,-!p6@FOXJ3!0.17!0.82!FOXJ3;;chr1:67390715..67390733,+!p7@MIER1!0.17!0.82!MIER1;;chr8:116681275..116681290,-!p11@TRPS1!0.17!0.82!TRPS1;;chr8:72756023..72756055,-!p6@MSC!0.17!0.82!MSC;;chr19:14117148..14117157,-!p2@RFX1!0.17!0.82!RFX1;;chr19:37998036..37998098,+!p2@ZNF793!0.17!0.82!ZNF793;;chr18:52989001..52989030,-!p10@TCF4!0.17!0.62!TCF4;;chr19:20748620..20748630,-!p3@ZNF737!0.17!0.62!ZNF737;;chr2:121493717..121493755,+!p3@GLI2!0.17!0.62!GLI2;;chr10:63851669..63851682,+!p10@ARID5B!0.17!0.62!ARID5B;;chr12:51611888..51611917,-!p3@POU6F1!0.17!0.62!POU6F1;;chr6:21593973..21593988,+!p1@SOX4!0.16!47.26!SOX4;;chr16:69599861..69599885,+!p1@NFAT5!0.16!20.75!NFAT5;;chr2:231191875..231191918,+!p1@SP140L!0.16!11.92!SP140L;;chr19:45908292..45908374,-!p1@PPP1R13L!0.16!10.89!PPP1R13L;;chr18:72265084..72265143,+!p1@ZNF407!0.16!9.04!ZNF407;;chr19:35225121..35225175,+!p1@ZNF181!0.16!6.58!ZNF181;;chr19:57988878..57988941,-!p1@ZNF772!0.16!6.58!ZNF772;;chr19:9434841..9434886,+!p1@ZNF559!0.16!5.96!ZNF559;;chr19:44952635..44952668,-!p1@ZNF229!0.16!5.75!ZNF229;;chr9:125667618..125667678,-!p2@RC3H2!0.16!5.14!RC3H2;;chr19:1652555..1652568,-!p2@TCF3!0.16!4.52!TCF3;;chr20:3388541..3388575,-!p2@C20orf194!0.16!4.32!C20orf194;;chr19:44455368..44455396,+!p1@ZNF221!0.16!3.70!ZNF221;;chr17:4890695..4890773,-!p2@CAMTA2!0.16!3.29!CAMTA2;;chr14:64971288..64971316,-!p2@ZBTB25!0.16!3.29!ZBTB25;;chr19:53636125..53636178,-!p1@ZNF415!0.16!2.88!ZNF415;;chr8:22550982..22550999,-!p1@EGR3!0.16!2.88!EGR3;;chr9:109625401..109625458,+!p1@ZNF462!0.16!2.67!ZNF462;;chr21:36262032..36262062,-!p5@RUNX1!0.16!2.67!RUNX1;;chr11:128392309..128392350,-!p3@ETS1!0.16!2.26!ETS1;;chr12:80084167..80084197,-!p5@PAWR!0.16!2.26!PAWR;;chr15:66994663..66994680,+!p1@SMAD6!0.16!2.26!SMAD6;;chr22:42229210..42229229,+!p3@SREBF2!0.16!2.26!SREBF2;;chr2:187350951..187350962,+!p2@ZC3H15!0.16!2.26!ZC3H15;;chr3:114819124..114819200,-!p3@ZBTB20!0.16!2.26!ZBTB20;;chr9:99180617..99180658,-!p1@ZNF367!0.16!2.05!ZNF367;;chr2:70314240..70314256,+!p4@PCBP1!0.16!1.85!PCBP1;;chr19:44037546..44037594,+!p1@ZNF575!0.16!1.85!ZNF575;;chr8:72756063..72756125,-!p1@MSC!0.16!1.85!MSC;;chr14:89628064..89628109,-!p4@FOXN3!0.16!1.85!FOXN3;;chr2:74375058..74375069,-!p3@BOLA3!0.16!1.64!BOLA3;;chr13:46543725..46543747,-!p2@ZC3H13!0.16!1.64!ZC3H13;;chr14:61191049..61191080,-!p2@SIX4!0.16!1.44!SIX4;;chr1:158969752..158969780,+!p6@IFI16!0.16!1.44!IFI16;;chr17:56065484..56065497,-!p3@VEZF1!0.16!1.23!VEZF1;;
+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000515
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11322-117D8: Difference between revisions

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Revision as of 20:37, 9 July 2012

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