FF:11395-118C9: Difference between revisions

Revision as of 20:53, 9 July 2012

Name:	Fibroblast - Periodontal Ligament, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	periodontal ligament
dev stage	fetus
sex	unknown
age	fetal
cell type	fibroblast
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	437
catalog number	SC2635
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.177
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.458
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.106
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.00355
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.432
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.106
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.189
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.235
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.138
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0367
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0663
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.251
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.106
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.055
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.106
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11907

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.855
MA0003.1	MA0003.1	0.693
MA0004.1	MA0004.1	0.688
MA0006.1	MA0006.1	0.879
MA0007.1	MA0007.1	0.555
MA0009.1	MA0009.1	0.357
MA0014.1	MA0014.1	0.0941
MA0017.1	MA0017.1	0.464
MA0018.2	MA0018.2	0.047
MA0019.1	MA0019.1	0.695
MA0024.1	MA0024.1	0.00678
MA0025.1	MA0025.1	0.227
MA0027.1	MA0027.1	0.477
MA0028.1	MA0028.1	0.0342
MA0029.1	MA0029.1	0.108
MA0030.1	MA0030.1	0.198
MA0031.1	MA0031.1	0.153
MA0035.2	MA0035.2	0.212
MA0038.1	MA0038.1	0.00225
MA0039.2	MA0039.2	0.0407
MA0040.1	MA0040.1	0.171
MA0041.1	MA0041.1	0.332
MA0042.1	MA0042.1	0.292
MA0043.1	MA0043.1	0.0537
MA0046.1	MA0046.1	0.312
MA0047.2	MA0047.2	0.0298
MA0048.1	MA0048.1	0.676
MA0050.1	MA0050.1	0.239
MA0051.1	MA0051.1	0.995
MA0052.1	MA0052.1	0.892
MA0055.1	MA0055.1	0.436
MA0057.1	MA0057.1	0.809
MA0058.1	MA0058.1	0.603
MA0059.1	MA0059.1	0.323
MA0060.1	MA0060.1	6.42919e-6
MA0061.1	MA0061.1	0.00461
MA0062.2	MA0062.2	0.174
MA0065.2	MA0065.2	0.0138
MA0066.1	MA0066.1	0.245
MA0067.1	MA0067.1	0.288
MA0068.1	MA0068.1	0.253
MA0069.1	MA0069.1	0.584
MA0070.1	MA0070.1	0.726
MA0071.1	MA0071.1	0.189
MA0072.1	MA0072.1	0.673
MA0073.1	MA0073.1	0.722
MA0074.1	MA0074.1	0.347
MA0076.1	MA0076.1	0.0288
MA0077.1	MA0077.1	0.181
MA0078.1	MA0078.1	0.499
MA0079.2	MA0079.2	0.585
MA0080.2	MA0080.2	0.0361
MA0081.1	MA0081.1	0.705
MA0083.1	MA0083.1	0.113
MA0084.1	MA0084.1	0.185
MA0087.1	MA0087.1	0.402
MA0088.1	MA0088.1	0.0921
MA0090.1	MA0090.1	0.0186
MA0091.1	MA0091.1	0.996
MA0092.1	MA0092.1	0.976
MA0093.1	MA0093.1	0.718
MA0099.2	MA0099.2	2.46697e-11
MA0100.1	MA0100.1	0.0296
MA0101.1	MA0101.1	0.301
MA0102.2	MA0102.2	0.419
MA0103.1	MA0103.1	2.24755e-5
MA0104.2	MA0104.2	0.696
MA0105.1	MA0105.1	6.26572e-5
MA0106.1	MA0106.1	0.632
MA0107.1	MA0107.1	0.0736
MA0108.2	MA0108.2	0.622
MA0111.1	MA0111.1	0.259
MA0112.2	MA0112.2	0.0231
MA0113.1	MA0113.1	0.41
MA0114.1	MA0114.1	0.365
MA0115.1	MA0115.1	0.326
MA0116.1	MA0116.1	0.00213
MA0117.1	MA0117.1	0.673
MA0119.1	MA0119.1	0.815
MA0122.1	MA0122.1	0.662
MA0124.1	MA0124.1	0.0811
MA0125.1	MA0125.1	0.738
MA0131.1	MA0131.1	0.577
MA0135.1	MA0135.1	0.242
MA0136.1	MA0136.1	0.873
MA0137.2	MA0137.2	0.0365
MA0138.2	MA0138.2	0.194
MA0139.1	MA0139.1	0.506
MA0140.1	MA0140.1	0.383
MA0141.1	MA0141.1	0.165
MA0142.1	MA0142.1	0.497
MA0143.1	MA0143.1	0.269
MA0144.1	MA0144.1	0.228
MA0145.1	MA0145.1	0.841
MA0146.1	MA0146.1	0.419
MA0147.1	MA0147.1	0.717
MA0148.1	MA0148.1	0.146
MA0149.1	MA0149.1	0.768
MA0150.1	MA0150.1	0.114
MA0152.1	MA0152.1	0.453
MA0153.1	MA0153.1	0.837
MA0154.1	MA0154.1	0.0318
MA0155.1	MA0155.1	0.127
MA0156.1	MA0156.1	0.528
MA0157.1	MA0157.1	0.349
MA0159.1	MA0159.1	0.00386
MA0160.1	MA0160.1	0.492
MA0162.1	MA0162.1	0.847
MA0163.1	MA0163.1	8.40149e-4
MA0164.1	MA0164.1	0.377
MA0258.1	MA0258.1	0.0193
MA0259.1	MA0259.1	0.716

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11907

Novel motif	Logo	P-value
1	1	0.0706
10	10	0.6
100	100	0.302
101	101	0.677
102	102	0.196
103	103	0.685
104	104	0.438
105	105	0.763
106	106	0.0217
107	107	0.447
108	108	0.304
109	109	0.894
11	11	0.269
110	110	0.531
111	111	0.326
112	112	0.119
113	113	0.0103
114	114	0.497
115	115	0.311
116	116	0.288
117	117	0.436
118	118	0.298
119	119	0.0292
12	12	0.661
120	120	0.683
121	121	0.441
122	122	0.938
123	123	9.76366e-5
124	124	0.748
125	125	0.33
126	126	0.495
127	127	0.668
128	128	0.295
129	129	0.979
13	13	0.135
130	130	0.01
131	131	0.941
132	132	0.28
133	133	0.86
134	134	0.0785
135	135	0.296
136	136	0.88
137	137	0.893
138	138	0.387
139	139	1.14668e-4
14	14	0.267
140	140	0.347
141	141	0.598
142	142	0.914
143	143	0.769
144	144	0.799
145	145	0.958
146	146	0.307
147	147	0.136
148	148	0.786
149	149	0.629
15	15	0.606
150	150	0.61
151	151	0.18
152	152	0.96
153	153	0.66
154	154	0.85
155	155	0.0279
156	156	0.888
157	157	0.312
158	158	0.0487
159	159	0.23
16	16	0.505
160	160	0.0687
161	161	0.5
162	162	0.324
163	163	0.321
164	164	0.143
165	165	0.249
166	166	0.617
167	167	0.345
168	168	0.838
169	169	0.284
17	17	0.335
18	18	0.879
19	19	0.786
2	2	0.641
20	20	0.596
21	21	0.638
22	22	0.866
23	23	0.547
24	24	0.166
25	25	0.287
26	26	0.654
27	27	0.746
28	28	0.695
29	29	0.224
3	3	0.257
30	30	0.313
31	31	0.544
32	32	0.178
33	33	0.863
34	34	0.469
35	35	0.0249
36	36	0.1
37	37	0.38
38	38	0.651
39	39	0.523
4	4	0.339
40	40	0.0409
41	41	0.909
42	42	0.98
43	43	0.419
44	44	0.0167
45	45	0.795
46	46	0.173
47	47	0.111
48	48	0.315
49	49	0.307
5	5	0.585
50	50	0.406
51	51	0.859
52	52	0.714
53	53	0.321
54	54	0.873
55	55	0.309
56	56	0.583
57	57	0.949
58	58	0.116
59	59	0.363
6	6	0.847
60	60	0.0778
61	61	0.701
62	62	0.0576
63	63	0.539
64	64	0.129
65	65	0.145
66	66	0.0276
67	67	0.632
68	68	0.392
69	69	0.546
7	7	0.255
70	70	0.0109
71	71	0.291
72	72	0.891
73	73	0.72
74	74	0.158
75	75	0.16
76	76	0.643
77	77	0.668
78	78	0.379
79	79	0.325
8	8	0.229
80	80	0.579
81	81	0.196
82	82	0.00382
83	83	0.986
84	84	0.693
85	85	0.0155
86	86	0.381
87	87	0.256
88	88	0.854
89	89	0.377
9	9	0.637
90	90	0.599
91	91	0.686
92	92	0.716
93	93	0.942
94	94	0.402
95	95	0.479
96	96	0.58
97	97	0.2
98	98	0.367
99	99	0.0539

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11907

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000067 human fibroblast of periodontium sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002556 (fibroblast of periodontium)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000075 (subdivision of skeletal system)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001758 (periodontium)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0000165 (mouth)
0003672 (dentition)
0011137 (axial skeletal system)
0010323 (cranial skeletal system)
0003129 (skull)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000067 (human fibroblast of periodontium sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.94!97.80!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.80!82.84!PRRX1;;chr15:57511609..57511651,+!p2@TCF12!1.78!97.53!TCF12;;chr20:55204351..55204377,+!p1@TFAP2C!1.63!52.64!TFAP2C;;chr6:34204921..34204939,+!p3@HMGA1!1.60!1104.38!HMGA1;;chr16:86544113..86544145,+!p1@FOXF1!1.55!42.67!FOXF1;;chr15:42749722..42749739,-!p2@ZFP106!1.54!59.57!ZFP106;;chr2:19558373..19558392,-!p1@OSR1!1.52!85.06!OSR1;;chr14:37131058..37131139,+!p1@PAX9!1.49!29.65!PAX9;;chr11:65686802..65686818,+!p6@DRAP1!1.36!37.40!DRAP1;;chr6:1389789..1389821,+!p1@FOXF2!1.33!27.98!FOXF2;;chr2:239756671..239756732,+!p1@TWIST2!1.31!60.95!TWIST2;;chr11:46299199..46299233,+!p1@CREB3L1!1.30!95.03!CREB3L1;;chr1:170632250..170632277,+!p7@PRRX1!1.30!19.12!PRRX1;;chr2:45236540..45236577,-!p1@SIX2!1.29!18.29!SIX2;;chr14:61116183..61116208,-!p1@SIX1!1.28!67.33!SIX1;;chr1:170633262..170633285,+!p3@PRRX1!1.27!20.23!PRRX1;;chr16:86600426..86600441,+!p1@FOXC2!1.26!42.39!FOXC2;;chr12:66218598..66218645,+!p2@HMGA2!1.25!75.92!HMGA2;;chr12:66218255..66218304,+!p3@HMGA2!1.24!44.05!HMGA2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.23!16.90!GLIS1;;chr3:141121847..141121868,+!p5@ZBTB38!1.20!22.72!ZBTB38;;chr11:65667846..65667868,-!p1@FOSL1!1.16!353.81!FOSL1;;chr7:14029283..14029311,-!p1@ETV1!1.15!70.37!ETV1;;chr11:65667884..65667895,-!p2@FOSL1!1.15!50.70!FOSL1;;chr11:65686732..65686756,+!p2@DRAP1!1.14!54.58!DRAP1;;chr2:102091566..102091581,-!p1@RFX8!1.13!12.47!RFX8;;chr2:96012397..96012417,+!p3@KCNIP3!1.12!12.19!KCNIP3;;chr3:141105705..141105770,+!p4@ZBTB38!1.11!14.41!ZBTB38;;chr9:96717629..96717644,-!p1@BARX1!1.10!11.64!BARX1;;chr20:42543441..42543497,+!p1@TOX2!1.08!50.43!TOX2;;chr7:19157248..19157268,-!p1@TWIST1!1.08!30.48!TWIST1;;chr2:239756739..239756755,+!p2@TWIST2!1.07!18.29!TWIST2;;chr1:170632723..170632739,+!p8@PRRX1!1.06!10.53!PRRX1;;chr20:55205825..55205847,+!p2@TFAP2C!1.06!10.53!TFAP2C;;chr9:132427883..132427951,+!p2@PRRX2!1.06!10.53!PRRX2;;chr1:170633058..170633084,+!p5@PRRX1!1.05!10.25!PRRX1;;chrY:2803415..2803468,+!p1@ZFY!1.04!9.97!ZFY;;chr8:93074803..93074845,-!p1@RUNX1T1!1.04!9.97!RUNX1T1;;chr1:170632137..170632172,+!p10@PRRX1!1.03!9.70!PRRX1;;chr20:39946361..39946379,-!p2@ZHX3!1.02!28.54!ZHX3;;chr3:157823517..157823562,-!p1@SHOX2!1.02!10.25!SHOX2;;chr2:200323414..200323455,-!p1@SATB2!1.01!20.23!SATB2;;chr2:200322654..200322707,-!p2@SATB2!0.98!12.47!SATB2;;chr1:170632959..170632987,+!p4@PRRX1!0.98!9.42!PRRX1;;chr10:28034739..28034756,-!p1@MKX!0.98!8.59!MKX;;chr8:93074848..93074871,-!p3@RUNX1T1!0.97!8.31!RUNX1T1;;chr12:66218212..66218244,+!p5@HMGA2!0.96!11.91!HMGA2;;chr15:57511589..57511608,+!p4@TCF12!0.96!8.03!TCF12;;chr12:115121962..115121987,-!p1@TBX3!0.95!68.71!TBX3;;chr3:141087393..141087426,+!p3@ZBTB38!0.95!32.69!ZBTB38;;chr2:223163706..223163730,-!p1@PAX3!0.94!7.76!PAX3;;chr1:170632115..170632136,+!p9@PRRX1!0.94!7.76!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.94!7.76!PRRX1;;chrY:21906594..21906622,-!p1@KDM5D!0.94!7.76!KDM5D;;chr9:132427972..132428056,+!p1@PRRX2!0.92!9.70!PRRX2;;chr2:102091144..102091183,-!p2@RFX8!0.91!7.20!RFX8;;chr18:52969844..52969895,-!p27@TCF4!0.91!7.20!TCF4;;chr6:10412600..10412637,-!p1@TFAP2A!0.90!11.91!TFAP2A;;chr9:77112244..77112262,+!p1@RORB!0.90!7.76!RORB;;chr12:115122318..115122331,-!p2@TBX3!0.90!6.93!TBX3;;chr2:96012353..96012378,+!p4@KCNIP3!0.90!6.93!KCNIP3;;chr3:141121820..141121838,+!p9@ZBTB38!0.90!6.93!ZBTB38;;chr1:25256756..25256774,-!p1@RUNX3!0.89!13.02!RUNX3;;chr4:81118647..81118666,+!p1@PRDM8!0.89!9.14!PRDM8;;chr19:13134772..13134822,+!p2@NFIX!0.88!9.97!NFIX;;chr10:63809106..63809127,+!p1@ARID5B!0.87!91.43!ARID5B;;chr6:85473156..85473210,-!p2@TBX18!0.87!8.03!TBX18;;chr5:139492456..139492489,+!p7@PURA!0.87!6.37!PURA;;chr1:170632439..170632465,+!p11@PRRX1!0.87!6.37!PRRX1;;chr3:141087339..141087387,+!p2@ZBTB38!0.86!67.60!ZBTB38;;chrX:66763856..66763896,+!p1@AR!0.86!9.14!AR;;chr6:10415276..10415341,-!p2@TFAP2A!0.86!7.76!TFAP2A;;chr12:66218836..66218888,+!p1@HMGA2!0.85!60.40!HMGA2;;chr20:42543506..42543549,+!p2@TOX2!0.84!14.96!TOX2;;chr12:115122005..115122016,-!p3@TBX3!0.84!7.20!TBX3;;chr12:115121802..115121814,-!p5@TBX3!0.83!5.82!TBX3;;chr4:299227..299272,-!p1@ZNF732!0.82!5.54!ZNF732;;chr7:44143925..44143970,+!p1@AEBP1!0.80!128.28!AEBP1;;chr7:14029312..14029325,-!p4@ETV1!0.78!6.37!ETV1;;chr2:172949484..172949522,+!p1@DLX1!0.78!4.99!DLX1;;chr2:96012298..96012317,+!p6@KCNIP3!0.78!4.99!KCNIP3;;chr16:86600870..86600921,+!p2@FOXC2!0.78!4.99!FOXC2;;chr12:96588219..96588263,+!p2@ELK3!0.77!38.51!ELK3;;chr11:46299539..46299620,+!p2@CREB3L1!0.77!8.59!CREB3L1;;chr12:66218904..66218913,+!p11@HMGA2!0.76!4.71!HMGA2;;chr1:170632051..170632081,+!p16@PRRX1!0.76!4.71!PRRX1;;chr3:114343039..114343085,-!p8@ZBTB20!0.76!4.71!ZBTB20;;chr8:49833978..49833996,-!p1@SNAI2!0.74!102.51!SNAI2;;chr7:17338266..17338282,+!p1@AHR!0.74!54.03!AHR;;chr8:49833948..49833973,-!p2@SNAI2!0.74!31.86!SNAI2;;chr12:66218573..66218596,+!p7@HMGA2!0.74!6.93!HMGA2;;chr10:31607702..31607755,+!p3@ZEB1!0.74!5.26!ZEB1;;chr14:61116168..61116180,-!p2@SIX1!0.74!5.26!SIX1;;chr18:52969674..52969685,-!p24@TCF4!0.74!4.43!TCF4;;chr1:170632310..170632321,+!p15@PRRX1!0.74!4.43!PRRX1;;chr17:41277372..41277418,-!p1@BRCA1!0.73!17.46!BRCA1;;chr6:34204973..34204990,+!p4@HMGA1!0.72!63.72!HMGA1;;chr14:62162258..62162269,+!p2@HIF1A!0.72!45.72!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!0.72!24.66!HIF1A;;chr7:19157043..19157088,-!p2@TWIST1!0.71!11.36!TWIST1;;chr6:1389824..1389840,+!p3@FOXF2!0.71!4.16!FOXF2;;chr6:34204672..34204692,+!p1@HMGA1!0.70!511.18!HMGA1;;chr12:96588143..96588185,+!p1@ELK3!0.69!54.03!ELK3;;chr17:56065729..56065781,-!p2@VEZF1!0.69!18.84!VEZF1;;chr5:139487608..139487663,+!p3@PURA!0.69!9.14!PURA;;chr9:102584159..102584174,+!p2@NR4A3!0.69!7.48!NR4A3;;chr7:14028488..14028516,-!p2@ETV1!0.69!4.43!ETV1;;chr12:115122303..115122314,-!p6@TBX3!0.69!3.88!TBX3;;chr12:2986206..2986258,-!p2@FOXM1!0.68!26.04!FOXM1;;chr4:4861385..4861398,+!p1@MSX1!0.68!12.47!MSX1;;chr8:67525473..67525518,-!p1@MYBL1!0.68!9.42!MYBL1;;chr17:7492684..7492778,-!p2@SOX15!0.67!8.59!SOX15;;chr12:66218183..66218209,+!p4@HMGA2!0.67!7.76!HMGA2;;chr11:65687362..65687436,+!p3@DRAP1!0.66!18.56!DRAP1;;chr12:115121770..115121781,-!p4@TBX3!0.66!3.60!TBX3;;chr14:37126765..37126799,+!p2@PAX9!0.66!3.60!PAX9;;chr19:13135386..13135435,+!p4@NFIX!0.66!3.60!NFIX;;chr6:1389989..1390019,+!p2@FOXF2!0.66!3.60!FOXF2;;chr2:45236579..45236596,-!p2@SIX2!0.66!3.60!SIX2;;chr3:141121871..141121885,+!p13@ZBTB38!0.66!3.60!ZBTB38;;chr1:170633245..170633256,+!p14@PRRX1!0.66!3.60!PRRX1;;chr1:75600067..75600094,+!p2@LHX8!0.66!3.60!LHX8;;chr20:55205791..55205817,+!p3@TFAP2C!0.66!3.60!TFAP2C;;chr10:31608127..31608156,+!p1@ZEB1!0.65!74.81!ZEB1;;chr10:63809134..63809145,+!p6@ARID5B!0.65!8.87!ARID5B;;chr19:13134457..13134462,+!p5@NFIX!0.65!6.65!NFIX;;chr11:65687243..65687276,+!p8@DRAP1!0.65!4.99!DRAP1;;chr11:6947647..6947698,+!p2@ZNF215!0.65!4.99!ZNF215;;chr5:321810..321877,+!p1@AHRR!0.64!12.19!AHRR;;chr9:102584262..102584276,+!p1@NR4A3!0.64!8.31!NR4A3;;chr6:85474299..85474324,-!p1@TBX18!0.64!6.65!TBX18;;chr12:66218378..66218401,+!p6@HMGA2!0.64!5.54!HMGA2;;chr1:158985493..158985535,+!p4@IFI16!0.64!5.54!IFI16;;chr2:95963052..95963106,+!p1@KCNIP3!0.64!3.32!KCNIP3;;chrX:66763914..66763933,+!p3@AR!0.64!3.32!AR;;chr12:2986275..2986363,-!p1@FOXM1!0.63!38.51!FOXM1;;chr7:44143978..44143989,+!p2@AEBP1!0.63!6.65!AEBP1;;chr15:83953397..83953425,-!p1@BNC1!0.63!3.88!BNC1;;chr17:59477233..59477263,+!p1@TBX2!0.62!11.36!TBX2;;chr4:26322267..26322334,+!p3@RBPJ!0.62!8.59!RBPJ;;chr20:39946400..39946423,-!p3@ZHX3!0.62!6.37!ZHX3;;chr1:158979792..158979814,+!p2@IFI16!0.61!34.91!IFI16;;chr11:12696002..12696022,+!p2@TEAD1!0.61!8.59!TEAD1;;chr7:137686763..137686784,-!p5@CREB3L2!0.61!5.82!CREB3L2;;chr2:231084820..231084836,-!p5@SP110!0.61!3.60!SP110;;chr2:172950227..172950249,+!p2@DLX1!0.61!3.05!DLX1;;chr1:170632683..170632696,+!p12@PRRX1!0.61!3.05!PRRX1;;chr16:86600458..86600461,+!p3@FOXC2!0.61!3.05!FOXC2;;chr12:53614115..53614154,-!p1@RARG!0.60!19.12!RARG;;chr3:12329358..12329393,+!p3@PPARG!0.60!8.31!PPARG;;chr3:12329397..12329433,+!p2@PPARG!0.60!7.76!PPARG;;chr3:114343826..114343869,-!p4@ZBTB20!0.60!6.65!ZBTB20;;chrX:66763815..66763854,+!p2@AR!0.60!4.16!AR;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.59!15.52!TAL1;;chr14:75988771..75988826,+!p1@BATF!0.59!4.16!BATF;;chr6:42419316..42419340,-!p4@TRERF1!0.58!4.71!TRERF1;;chr11:65668011..65668020,-!p3@FOSL1!0.58!2.77!FOSL1;;chr12:66218923..66218934,+!p14@HMGA2!0.58!2.77!HMGA2;;chr12:77459306..77459365,-!p1@E2F7!0.57!41.84!E2F7;;chr22:41697497..41697515,+!p2@ZC3H7B!0.57!8.87!ZC3H7B;;chr8:67525443..67525459,-!p2@MYBL1!0.57!4.43!MYBL1;;chr19:3366570..3366619,+!p1@NFIC!0.56!104.73!NFIC;;chr6:155635583..155635644,-!p1@TFB1M!0.56!42.39!TFB1M;;chr11:65687222..65687240,+!p7@DRAP1!0.56!3.60!DRAP1;;chr4:81104985..81105005,+!p4@PRDM8!0.56!3.32!PRDM8;;chr7:137686791..137686821,-!p1@CREB3L2!0.55!92.54!CREB3L2;;chr3:185826764..185826803,-!p2@ETV5!0.55!11.64!ETV5;;chr18:52989031..52989079,-!p2@TCF4!0.55!6.93!TCF4;;chr19:53496768..53496799,-!p1@ZNF702P!0.55!4.43!ZNF702P;;chr14:62162224..62162254,+!p1@HIF1A!0.54!460.48!HIF1A;;chr7:42276822..42276895,-!p2@GLI3!0.54!8.87!GLI3;;chr6:45390025..45390076,+!p2@RUNX2!0.54!6.93!RUNX2;;chr17:41622765..41622821,-!p2@ETV4!0.54!4.16!ETV4;;chr12:66218443..66218461,+!p8@HMGA2!0.54!3.32!HMGA2;;chr11:65686776..65686787,+!p9@DRAP1!0.54!3.05!DRAP1;;chr12:85673977..85674015,+!p1@ALX1!0.54!2.49!ALX1;;chr14:74256787..74256858,-!p6@C14orf43!0.54!2.49!C14orf43;;chr19:2867325..2867348,+!p1@ZNF556!0.54!2.49!ZNF556;;chr6:134210243..134210257,+!p1@TCF21!0.54!2.49!TCF21;;chr8:116673894..116673913,-!p12@TRPS1!0.54!2.49!TRPS1;;chr19:9609272..9609297,-!p1@ZNF560!0.54!2.49!ZNF560;;chr1:170632762..170632786,+!p13@PRRX1!0.54!2.49!PRRX1;;chr3:141087562..141087594,+!p12@ZBTB38!0.54!2.49!ZBTB38;;chr14:73360799..73360817,-!p1@DPF3!0.53!10.25!DPF3;;chr9:16870710..16870763,-!p1@BNC2!0.53!4.71!BNC2;;chr11:46299186..46299195,+!p3@CREB3L1!0.53!2.77!CRE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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11395-118C9: Difference between revisions

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Revision as of 20:53, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0