FF:12260-130A1: Difference between revisions

Revision as of 22:41, 9 July 2012

Name:	Lymphatic Endothelial cells response to VEGFC, 00hr00min, biol_rep1 (MM XIX - 1)
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	lymph node
dev stage	NA
sex	NA
age	NA
cell type	endothelial cell, lymphatic
cell line	NA
company	NA
collaboration	Michael Detmar (Swiss Federal Institute of Technology, ETH Zurich)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.11
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.0269
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	1.019
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.605
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.197
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.204
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.125
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.107
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.192
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0235
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0965
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0586
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.362
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.922
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.156
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11936

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.252
MA0003.1	MA0003.1	0.326
MA0004.1	MA0004.1	0.173
MA0006.1	MA0006.1	0.0282
MA0007.1	MA0007.1	0.111
MA0009.1	MA0009.1	0.829
MA0014.1	MA0014.1	0.617
MA0017.1	MA0017.1	0.0838
MA0018.2	MA0018.2	0.0326
MA0019.1	MA0019.1	0.0547
MA0024.1	MA0024.1	0.694
MA0025.1	MA0025.1	0.827
MA0027.1	MA0027.1	0.433
MA0028.1	MA0028.1	0.922
MA0029.1	MA0029.1	0.937
MA0030.1	MA0030.1	0.804
MA0031.1	MA0031.1	0.913
MA0035.2	MA0035.2	0.0993
MA0038.1	MA0038.1	0.807
MA0039.2	MA0039.2	0.383
MA0040.1	MA0040.1	0.0708
MA0041.1	MA0041.1	0.382
MA0042.1	MA0042.1	0.597
MA0043.1	MA0043.1	0.0214
MA0046.1	MA0046.1	0.55
MA0047.2	MA0047.2	0.179
MA0048.1	MA0048.1	0.284
MA0050.1	MA0050.1	1.15482e-5
MA0051.1	MA0051.1	5.01516e-7
MA0052.1	MA0052.1	0.216
MA0055.1	MA0055.1	0.0829
MA0057.1	MA0057.1	0.993
MA0058.1	MA0058.1	0.0387
MA0059.1	MA0059.1	0.118
MA0060.1	MA0060.1	0.741
MA0061.1	MA0061.1	5.41752e-5
MA0062.2	MA0062.2	0.762
MA0065.2	MA0065.2	0.0571
MA0066.1	MA0066.1	0.0677
MA0067.1	MA0067.1	0.2
MA0068.1	MA0068.1	0.872
MA0069.1	MA0069.1	0.0818
MA0070.1	MA0070.1	0.392
MA0071.1	MA0071.1	0.917
MA0072.1	MA0072.1	0.655
MA0073.1	MA0073.1	0.582
MA0074.1	MA0074.1	0.582
MA0076.1	MA0076.1	0.0735
MA0077.1	MA0077.1	6.07139e-8
MA0078.1	MA0078.1	0.0266
MA0079.2	MA0079.2	0.95
MA0080.2	MA0080.2	0.00232
MA0081.1	MA0081.1	0.387
MA0083.1	MA0083.1	0.577
MA0084.1	MA0084.1	0.019
MA0087.1	MA0087.1	0.00778
MA0088.1	MA0088.1	0.314
MA0090.1	MA0090.1	0.0482
MA0091.1	MA0091.1	0.49
MA0092.1	MA0092.1	0.133
MA0093.1	MA0093.1	0.15
MA0099.2	MA0099.2	0.0123
MA0100.1	MA0100.1	0.103
MA0101.1	MA0101.1	3.8681e-14
MA0102.2	MA0102.2	0.233
MA0103.1	MA0103.1	0.94
MA0104.2	MA0104.2	0.925
MA0105.1	MA0105.1	0.0127
MA0106.1	MA0106.1	0.00649
MA0107.1	MA0107.1	5.77236e-14
MA0108.2	MA0108.2	0.00895
MA0111.1	MA0111.1	0.736
MA0112.2	MA0112.2	0.0532
MA0113.1	MA0113.1	0.231
MA0114.1	MA0114.1	0.236
MA0115.1	MA0115.1	0.716
MA0116.1	MA0116.1	0.216
MA0117.1	MA0117.1	0.403
MA0119.1	MA0119.1	0.0387
MA0122.1	MA0122.1	0.196
MA0124.1	MA0124.1	0.324
MA0125.1	MA0125.1	0.71
MA0131.1	MA0131.1	0.905
MA0135.1	MA0135.1	0.235
MA0136.1	MA0136.1	0.00839
MA0137.2	MA0137.2	0.0325
MA0138.2	MA0138.2	0.371
MA0139.1	MA0139.1	0.262
MA0140.1	MA0140.1	0.128
MA0141.1	MA0141.1	0.346
MA0142.1	MA0142.1	0.747
MA0143.1	MA0143.1	0.563
MA0144.1	MA0144.1	0.00131
MA0145.1	MA0145.1	0.218
MA0146.1	MA0146.1	0.42
MA0147.1	MA0147.1	0.917
MA0148.1	MA0148.1	0.0557
MA0149.1	MA0149.1	0.0875
MA0150.1	MA0150.1	0.47
MA0152.1	MA0152.1	0.57
MA0153.1	MA0153.1	0.388
MA0154.1	MA0154.1	0.0579
MA0155.1	MA0155.1	0.122
MA0156.1	MA0156.1	2.70911e-4
MA0157.1	MA0157.1	0.278
MA0159.1	MA0159.1	0.11
MA0160.1	MA0160.1	0.722
MA0162.1	MA0162.1	0.07
MA0163.1	MA0163.1	0.22
MA0164.1	MA0164.1	0.476
MA0258.1	MA0258.1	0.156
MA0259.1	MA0259.1	0.335

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11936

Novel motif	Logo	P-value
1	1	0.145
10	10	0.999
100	100	0.104
101	101	0.251
102	102	0.942
103	103	0.221
104	104	0.744
105	105	0.767
106	106	0.0229
107	107	0.0506
108	108	0.156
109	109	0.0247
11	11	0.0386
110	110	0.0288
111	111	0.594
112	112	0.531
113	113	0.291
114	114	0.442
115	115	0.839
116	116	0.387
117	117	0.221
118	118	0.851
119	119	0.0276
12	12	0.997
120	120	0.0487
121	121	0.515
122	122	0.768
123	123	0.202
124	124	0.0285
125	125	0.488
126	126	0.757
127	127	0.399
128	128	0.89
129	129	0.331
13	13	0.0164
130	130	0.447
131	131	0.273
132	132	0.221
133	133	0.854
134	134	0.653
135	135	0.0808
136	136	0.352
137	137	0.371
138	138	0.977
139	139	0.916
14	14	0.895
140	140	0.255
141	141	0.133
142	142	0.473
143	143	0.0427
144	144	0.995
145	145	0.0898
146	146	0.254
147	147	0.0658
148	148	0.462
149	149	0.0275
15	15	0.818
150	150	0.239
151	151	0.517
152	152	0.0157
153	153	0.202
154	154	0.0619
155	155	0.247
156	156	0.2
157	157	0.0459
158	158	0.111
159	159	0.187
16	16	0.344
160	160	0.0448
161	161	0.894
162	162	0.992
163	163	0.737
164	164	0.388
165	165	0.572
166	166	0.707
167	167	0.447
168	168	0.0671
169	169	0.0342
17	17	0.0958
18	18	0.855
19	19	0.0702
2	2	0.564
20	20	0.875
21	21	0.735
22	22	0.267
23	23	0.265
24	24	0.531
25	25	0.334
26	26	0.543
27	27	0.205
28	28	0.22
29	29	0.303
3	3	0.726
30	30	0.678
31	31	0.546
32	32	0.352
33	33	0.0381
34	34	0.471
35	35	0.719
36	36	0.00668
37	37	0.0749
38	38	0.107
39	39	0.475
4	4	0.731
40	40	3.92975e-4
41	41	0.128
42	42	0.807
43	43	0.631
44	44	0.276
45	45	0.345
46	46	0.359
47	47	0.277
48	48	0.0852
49	49	0.874
5	5	0.406
50	50	0.333
51	51	0.536
52	52	0.979
53	53	0.823
54	54	0.66
55	55	0.761
56	56	0.484
57	57	0.614
58	58	0.382
59	59	0.122
6	6	0.176
60	60	0.741
61	61	0.691
62	62	0.69
63	63	0.22
64	64	0.734
65	65	0.0855
66	66	0.58
67	67	0.358
68	68	0.54
69	69	0.969
7	7	0.878
70	70	0.778
71	71	0.268
72	72	0.402
73	73	0.00226
74	74	0.434
75	75	0.192
76	76	0.614
77	77	0.274
78	78	0.0618
79	79	0.236
8	8	0.0235
80	80	0.933
81	81	0.59
82	82	0.335
83	83	0.534
84	84	0.518
85	85	0.451
86	86	0.789
87	87	0.0188
88	88	0.845
89	89	0.213
9	9	0.669
90	90	0.825
91	91	0.676
92	92	0.144
93	93	0.866
94	94	0.569
95	95	0.00835
96	96	0.705
97	97	0.44
98	98	0.789
99	99	0.0233

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11936

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000410 human Lymphatic Endothelial cells 0min after VEGFC treatment sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0002138 (endothelial cell of lymphatic vessel)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000055 (vessel)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002049 (vasculature)
0007798 (vascular system)
0001473 (lymphatic vessel)
0002465 (lymphoid system)
0004535 (cardiovascular system)
0004536 (lymph vasculature)
0006558 (lymphatic part of lymphoid system)
0002193 (hemolymphoid system)
0002405 (immune system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000350 (experimentally modified sample)
0000049 (human lymphatic endothelial cell sample)
0000341 (Vegfc treatment sample)
0000344 (0 minute sample)
0000410 (human Lymphatic Endothelial cells 0min after VEGFC treatment sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000222 (mesodermal cell)
CL:0005022 (vascular lymphangioblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr21:39870339..39870443,-!p1@ERG!2.14!136.86!ERG;;chr8:55370487..55370503,+!p1@SOX17!2.06!114.05!SOX17;;chr20:62680984..62680999,-!p1@SOX18!1.98!122.42!SOX18;;chr8:10588010..10588030,-!p1@SOX7!1.95!88.64!SOX7;;chr1:214161272..214161322,+!p1@PROX1!1.86!99.76!PROX1;;chr22:19748231..19748317,+!p1@TBX1!1.73!52.41!TBX1;;chr17:6926362..6926377,+!p1@BCL6B!1.68!46.34!BCL6B;;chr3:12330560..12330579,+!p1@PPARG!1.63!47.79!PPARG;;chr18:53068911..53068935,-!p4@TCF4!1.57!40.57!TCF4;;chr17:45933057..45933064,-!p3@SP6!1.50!30.89!SP6;;chr10:94449703..94449718,+!p1@HHEX!1.41!93.84!HHEX;;chr12:96588368..96588394,+!p3@ELK3!1.38!59.91!ELK3;;chr2:177053386..177053402,+!p1@HOXD1!1.28!18.19!HOXD1;;chr16:85932760..85932775,+!p1@IRF8!1.27!17.61!IRF8;;chr8:80679993..80680011,-!p1@HEY1!1.24!23.39!HEY1;;chr17:46682321..46682362,-!p1@HOXB6!1.21!15.16!HOXB6;;chr18:52988979..52988993,-!p18@TCF4!1.15!13.28!TCF4;;chr17:46688334..46688385,-!p1@HOXB7!1.14!18.48!HOXB7;;chr18:53089538..53089578,-!p14@TCF4!1.14!12.85!TCF4;;chr7:26191809..26191890,+!p1@NFE2L3!1.13!61.21!NFE2L3;;chr22:41697497..41697515,+!p2@ZC3H7B!1.08!30.32!ZC3H7B;;chr16:86600426..86600441,+!p1@FOXC2!1.08!27.43!FOXC2;;chr2:176994408..176994492,+!p1@HOXD8!1.06!10.39!HOXD8;;chr18:52989001..52989030,-!p10@TCF4!1.05!11.26!TCF4;;chr1:47695003..47695042,-!p2@TAL1!1.05!10.11!TAL1;;chr18:22932080..22932170,-!p1@ZNF521!1.03!42.01!ZNF521;;chr7:27205106..27205134,-!p2@HOXA9!1.01!9.24!HOXA9;;chr6:85474299..85474324,-!p1@TBX18!1.00!16.31!TBX18;;chr3:128206762..128206781,-!p2@GATA2!0.99!56.30!GATA2;;chr18:52989565..52989623,-!p9@TCF4!0.98!10.97!TCF4;;chr2:176981499..176981522,+!p2@HOXD10!0.98!8.52!HOXD10;;chr18:53177984..53178004,-!p17@TCF4!0.97!8.37!TCF4;;chr19:46801639..46801699,+!p1@HIF3A!0.97!8.37!HIF3A;;chr11:65430554..65430579,-!p3@RELA!0.93!19.63!RELA;;chr10:31288398..31288455,-!p2@ZNF438!0.92!8.52!ZNF438;;chrY:21906594..21906622,-!p1@KDM5D!0.91!7.22!KDM5D;;chr18:52989031..52989079,-!p2@TCF4!0.90!17.04!TCF4;;chr11:128563948..128564003,+!p1@FLI1!0.89!84.74!FLI1;;chr10:31288370..31288393,-!p3@ZNF438!0.89!6.79!ZNF438;;chr7:27196267..27196311,-!p1@HOXA7!0.89!6.79!HOXA7;;chr22:19746969..19746987,+!p2@TBX1!0.89!6.79!TBX1;;chr18:52988952..52988965,-!p23@TCF4!0.89!6.79!TCF4;;chr4:146403912..146403972,+!p5@SMAD1!0.88!8.66!SMAD1;;chr14:74256787..74256858,-!p6@C14orf43!0.86!6.21!C14orf43;;chr1:6479968..6479986,-!p1@HES2!0.86!6.21!HES2;;chr8:106330656..106330684,+!p1@ZFPM2!0.85!16.89!ZFPM2;;chr14:35872962..35873025,-!p3@NFKBIA!0.85!16.02!NFKBIA;;chr3:101546827..101546847,+!p2@NFKBIZ!0.83!8.23!NFKBIZ;;chr22:38598086..38598105,+!p1@MAFF!0.81!63.09!MAFF;;chr6:21597765..21597779,+!p2@SOX4!0.81!47.21!SOX4;;chr2:231280954..231280965,+!p2@SP100!0.81!10.39!SP100;;chr4:185395633..185395651,-!p2@IRF2!0.81!9.10!IRF2;;chr12:80084137..80084165,-!p10@PAWR!0.80!7.07!PAWR;;chr22:41697484..41697496,+!p3@ZC3H7B!0.80!6.93!ZC3H7B;;chr7:27192185..27192209,-!p1@HOXA3!0.80!5.34!HOXA3;;chr22:38597987..38598021,+!p2@MAFF!0.79!33.93!MAFF;;chr10:94449675..94449694,+!p2@HHEX!0.79!14.73!HHEX;;chr20:50721803..50721857,-!p2@ZFP64!0.79!8.52!ZFP64;;chr6:85473156..85473210,-!p2@TBX18!0.78!6.21!TBX18;;chr7:27205136..27205164,-!p1@HOXA9!0.77!4.91!HOXA9;;chr17:46690839..46690884,-!p1@HOXB8!0.77!4.91!HOXB8;;chr1:23885981..23886002,-!p1@ID3!0.76!920.34!ID3;;chr20:30193083..30193098,+!p1@ID1!0.76!421.69!ID1;;chr10:63809013..63809041,+!p3@ARID5B!0.76!29.16!ARID5B;;chr8:80680024..80680046,-!p2@HEY1!0.76!5.49!HEY1;;chr19:13213399..13213414,-!p6@LYL1!0.75!4.62!LYL1;;chr2:46524537..46524553,+!p1@EPAS1!0.73!486.08!EPAS1;;chr1:209979467..209979494,-!p1@IRF6!0.73!5.05!IRF6;;chr6:21593973..21593988,+!p1@SOX4!0.72!173.82!SOX4;;chr4:103422499..103422632,+!p1@NFKB1!0.72!99.18!NFKB1;;chr19:13213511..13213545,-!p2@LYL1!0.72!4.62!LYL1;;chr5:131826457..131826514,-!p1@IRF1!0.71!183.92!IRF1;;chr19:42636586..42636607,-!p1@POU2F2!0.71!12.42!POU2F2;;chr2:85980951..85981004,+!p1@ATOH8!0.71!7.07!ATOH8;;chr18:53089493..53089517,-!p15@TCF4!0.71!4.19!TCF4;;chr15:96874012..96874042,+!p2@NR2F2!0.70!40.57!NR2F2;;chr10:104154246..104154347,+!p3@NFKB2!0.70!27.43!NFKB2;;chr4:4861385..4861398,+!p1@MSX1!0.70!13.14!MSX1;;chr13:37494365..37494381,-!p1@SMAD9!0.70!7.51!SMAD9;;chr10:104155659..104155676,+!p4@NFKB2!0.70!5.20!NFKB2;;chr9:16705069..16705086,-!p3@BNC2!0.70!4.04!BNC2;;chr14:35873947..35873965,-!p1@NFKBIA!0.69!286.86!NFKBIA;;chr8:48650715..48650735,-!p1@CEBPD!0.68!559.56!CEBPD;;chr15:96873984..96873999,+!p3@NR2F2!0.68!32.05!NR2F2;;chr10:104155480..104155534,+!p2@NFKB2!0.68!28.15!NFKB2;;chr20:50159198..50159299,-!p1@NFATC2!0.68!5.77!NFATC2;;chr20:48599506..48599526,+!p1@SNAI1!0.67!27.29!SNAI1;;chr4:146402843..146402864,+!p3@SMAD1!0.67!7.94!SMAD1;;chr6:34204921..34204939,+!p3@HMGA1!0.66!125.89!HMGA1;;chr10:35484804..35484902,+!p2@CREM!0.66!15.45!CREM;;chr3:12329397..12329433,+!p2@PPARG!0.66!9.10!PPARG;;chr4:146404119..146404158,+!p9@SMAD1!0.66!3.61!SMAD1;;chr12:80084018..80084035,-!p17@PAWR!0.66!3.61!PAWR;;chr5:92918919..92918942,+!p1@NR2F1!0.65!17.76!NR2F1;;chr2:46524897..46524911,+!p2@EPAS1!0.65!10.97!EPAS1;;chr12:80084167..80084197,-!p5@PAWR!0.65!9.10!PAWR;;chr7:27224911..27224922,-!p5@HOXA11!0.65!3.46!HOXA11;;chr18:22932004..22932021,-!p2@ZNF521!0.65!3.46!ZNF521;;chr6:130339710..130339745,+!p1@L3MBTL3!0.64!31.04!L3MBTL3;;chr4:185395590..185395627,-!p3@IRF2!0.64!4.33!IRF2;;chr1:47697539..47697573,-!p3@TAL1!0.64!3.32!TAL1;;chr10:94451574..94451587,+!p6@HHEX!0.64!3.32!HHEX;;chr2:28615716..28615733,+!p1@FOSL2!0.63!183.35!FOSL2;;chr11:128392273..128392308,-!p2@ETS1!0.63!15.88!ETS1;;chr6:44233252..44233296,-!p1@NFKBIE!0.62!37.54!NFKBIE;;chr12:11802753..11802834,+!p2@ETV6!0.62!18.19!ETV6;;chr19:49865646..49865718,-!p1@TEAD2!0.61!31.18!TEAD2;;chr8:55370720..55370733,+!p2@SOX17!0.61!3.03!SOX17;;chr4:103446567..103446592,+!p15@NFKB1!0.61!3.03!NFKB1;;chr18:53068940..53068951,-!p21@TCF4!0.61!3.03!TCF4;;chr18:53089453..53089482,-!p11@TCF4!0.61!3.03!TCF4;;chr22:41697520..41697613,+!p1@ZC3H7B!0.60!203.41!ZC3H7B;;chr9:14314566..14314618,-!p1@NFIB!0.60!43.60!NFIB;;chr18:53089521..53089533,-!p22@TCF4!0.59!2.89!TCF4;;chr18:53177899..53177918,-!p33@TCF4!0.59!2.89!TCF4;;chr17:3571863..3571881,-!p1@TAX1BP3!0.58!248.89!TAX1BP3;;chr6:126240380..126240430,+!p2@NCOA7!0.58!8.37!NCOA7;;chr18:53257001..53257015,-!p5@TCF4!0.57!5.20!TCF4;;chr3:71355163..71355209,-!p5@FOXP1!0.57!4.04!FOXP1;;chr2:176987441..176987454,+!p1@HOXD9!0.57!2.74!HOXD9;;chr2:176987463..176987479,+!p2@HOXD9!0.57!2.74!HOXD9;;chr2:177001290..177001315,+!p1@HOXD3!0.57!2.74!HOXD3;;chr18:22931979..22931992,-!p3@ZNF521!0.57!2.74!ZNF521;;chr1:214161328..214161348,+!p2@PROX1!0.57!2.74!PROX1;;chr12:80084303..80084332,-!p1@PAWR!0.56!18.91!PAWR;;chr5:88179195..88179224,-!p3@MEF2C!0.56!4.62!MEF2C;;chr14:75988771..75988826,+!p1@BATF!0.56!3.75!BATF;;chr18:53068982..53068993,-!p20@TCF4!0.56!2.60!TCF4;;chr5:71803177..71803255,-!p1@ZNF366!0.56!2.60!ZNF366;;chr7:27195867..27195893,-!p3@HOXA7!0.56!2.60!HOXA7;;chr15:90544532..90544563,+!p1@ZNF710!0.55!5.92!ZNF710;;chr19:19303794..19303805,+!p5@RFXANK!0.55!3.03!RFXANK;;chr5:88178983..88179012,-!p1@MEF2C!0.54!24.25!MEF2C;;chr11:65430535..65430549,-!p4@RELA!0.54!3.03!RELA;;chr11:128457446..128457461,-!p4@ETS1!0.54!2.45!ETS1;;chr11:65429891..65429915,-!p7@RELA!0.54!2.45!RELA;;chr16:86600870..86600921,+!p2@FOXC2!0.54!2.45!FOXC2;;chr1:214161358..214161377,+!p3@PROX1!0.54!2.45!PROX1;;chr10:63809106..63809127,+!p1@ARID5B!0.53!41.14!ARID5B;;chr9:14314131..14314147,-!p2@NFIB!0.53!16.89!NFIB;;chr3:12329358..12329393,+!p3@PPARG!0.53!6.93!PPARG;;chr2:85981222..85981259,+!p2@ATOH8!0.53!4.48!ATOH8;;chr19:13213662..13213686,-!p1@LYL1!0.53!3.90!LYL1;;chr10:63808979..63808990,+!p8@ARID5B!0.53!2.74!ARID5B;;chr3:101568349..101568365,+!p1@NFKBIZ!0.52!159.24!NFKBIZ;;chr12:3069037..3069119,+!p2@TEAD4!0.52!9.82!TEAD4;;chr7:27224842..27224872,-!p1@HOXA11!0.52!2.31!HOXA11;;chr17:47892398..47892407,+!p2@KAT7!0.52!2.31!KAT7;;chr19:45252008..45252024,+!p2@BCL3!0.51!9.24!BCL3;;chr9:14083467..14083483,-!p4@NFIB!0.51!6.64!NFIB;;chr9:14082760..14082775,-!p6@NFIB!0.51!4.19!NFIB;;chr2:85980919..85980942,+!p4@ATOH8!0.51!2.45!ATOH8;;chr15:96876966..96877017,+!p12@NR2F2!0.50!3.46!NR2F2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.49!34.50!ZC3H12A;;chr1:161736140..161736151,+!p3@ATF6!0.49!8.23!ATF6;;chr15:96874145..96874166,+!p7@NR2F2!0.49!4.76!NR2F2;;chr11:65686802..65686818,+!p6@DRAP1!0.49!4.19!DRAP1;;chr19:57106647..57106686,+!p1@ZNF71!0.48!17.76!ZNF71;;chr9:35732647..35732678,+!p2@CREB3!0.48!14.87!CREB3;;chr15:96874216..96874236,+!p13@NR2F2!0.48!3.61!NR2F2;;chr15:83953397..83953425,-!p1@BNC1!0.48!2.45!BNC1;;chr18:53069219..53069253,-!p35@TCF4!0.48!2.02!TCF4;;chrY:2803415..2803468,+!p1@ZFY!0.48!2.02!ZFY;;chr22:19747040..19747054,+!p3@TBX1!0.48!2.02!TBX1;;chr15:96873921..96873946,+!p1@NR2F2!0.47!75.50!NR2F2;;chr1:151032860..151032918,+!p1@MLLT11!0.47!31.18!MLLT11;;chr19:45504688..45504782,+!p1@RELB!0.47!15.59!RELB;;chr12:27485823..27485868,+!p2@ARNTL2!0.47!10.25!ARNTL2;;chr12:66218255..66218304,+!p3@HMGA2!0.47!6.64!HMGA2;;chr2:46524878..46524891,+!p3@EPAS1!0.47!4.04!EPAS1;;chr2:46602901..46602926,+!p7@EPAS1!0.47!2.89!EPAS1;;chr22:38598042..38598052,+!p4@MAFF!0.46!3.46!MAFF;;chr18:6414884..6414942,-!p1@L3MBTL4!0.46!2.60!L3MBTL4;;chr17:46688310..46688323,-!p4@HOXB7!0.46!1.88!HOXB7;;chr1:201979703..201979721,+!p2@ELF3!0.46!1.88!ELF3;;chr1:47696918..47696935,-!p6@TAL1!0.46!1.88!TAL1;;chr6:85474198..85474212,-!p3@TBX18!0.46!1.88!TBX18;;chr7:27190547..27190591,-!p1@HOXA6!0.46!1.88!HOXA6;;chr7:27205089..27205096,-!p4@HOXA9!0.46!1.88!HOXA9;;chr22:38598057..38598071,+!p3@MAFF!0.45!5.34!MAFF;;chr15:96873861..96873872,+!p9@NR2F2!0.45!4.62!NR2F2;;chr8:73921136..73921151,+!p2@TERF1!0.45!3.18!TERF1;;chr4:185395191..185395226,-!p4@IRF2!0.45!2.89!IRF2;;chr14:35872926..35872951,-!p4@NFKBIA!0.45!2.89!NFKBIA;;chr17:7590797..7590815,-!p1@TP53!0.44!109.43!TP53;;chr12:80085255..80085284,-!p9@PAWR!0.44!2.89!PAWR;;chr19:49864746..49864780,-!p2@TEAD2!0.44!2.74!TEAD2;;chr6:21597283..21597312,+!p7@SOX4!0.44!2.60!SOX4;;chr8:106330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+|ffid_belonging_in_development=CL:0000222,CL:0005022
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:12260-130A1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 22:41, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0