FFCP PHASE1:Mm9::chr2:75521256..75521268,+: Difference between revisions
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|id=chr2:75521256..75521268,+ | |id=chr2:75521256..75521268,+ | ||
|ontology_enrichment_celltype=CL:0000988!7.01e-15!32;CL:0002032!7.01e-15!32;CL:0000037!7.01e-15!32;CL:0000566!7.01e-15!32;CL:0000837!7.01e-15!32;CL:0000838!2.57e-14!12;CL:0000542!4.08e-13!13;CL:0000051!4.08e-13!13;CL:0000084!5.80e-12!11;CL:0000827!5.80e-12!11;CL:0002320!4.46e-11!46;CL:0000134!4.46e-11!46;CL:0000791!4.57e-11!9;CL:0000789!4.57e-11!9;CL:0002420!4.57e-11!9;CL:0002419!4.57e-11!9;CL:0000790!4.57e-11!9;CL:0000738!1.00e-09!17;CL:0002087!1.00e-09!17;CL:0000219!5.80e-09!54;CL:0000034!8.94e-09!97;CL:0000624!1.01e-08!8;CL:0000063!7.89e-08!66;CL:0002031!8.98e-08!25 | |ontology_enrichment_celltype=CL:0000988!7.01e-15!32;CL:0002032!7.01e-15!32;CL:0000037!7.01e-15!32;CL:0000566!7.01e-15!32;CL:0000837!7.01e-15!32;CL:0000838!2.57e-14!12;CL:0000542!4.08e-13!13;CL:0000051!4.08e-13!13;CL:0000084!5.80e-12!11;CL:0000827!5.80e-12!11;CL:0002320!4.46e-11!46;CL:0000134!4.46e-11!46;CL:0000791!4.57e-11!9;CL:0000789!4.57e-11!9;CL:0002420!4.57e-11!9;CL:0002419!4.57e-11!9;CL:0000790!4.57e-11!9;CL:0000738!1.00e-09!17;CL:0002087!1.00e-09!17;CL:0000219!5.80e-09!54;CL:0000034!8.94e-09!97;CL:0000624!1.01e-08!8;CL:0000063!7.89e-08!66;CL:0002031!8.98e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.62e-10,1;CL:0000945,6.88e-10,1;CL:0000236,6.88e-10,1;CL:0000826,6.88e-10,1;CL:0000213,8.42e-10,1;CL:0002078,8.42e-10,1;CL:0000115,8.42e-10,1;CL:0002262,8.42e-10,1;CL:1000398,8.42e-10,1;CL:0000838,3.34e-07,12;CL:0000988,6.49e-07,32;CL:0002032,6.49e-07,32;CL:0000037,6.49e-07,32;CL:0000837,6.49e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.46e-11!46 | |ontology_enrichment_uberon=UBERON:0002384!4.46e-11!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,8.42e-10,1;UBERON:0001281,8.42e-10,1;UBERON:0000353,8.42e-10,1;UBERON:0003497,8.42e-10,1;UBERON:0003909,8.42e-10,1;UBERON:0003928,8.42e-10,1;UBERON:0003835,8.42e-10,1;UBERON:0003513,8.42e-10,1;UBERON:0001280,8.42e-10,1;UBERON:0004647,8.42e-10,1;UBERON:0002294,8.42e-10,1;UBERON:0001173,8.42e-10,1;UBERON:0004912,8.42e-10,1;UBERON:0005171,8.42e-10,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.856003649656029,0.611942816932982,0,0,0,0,0.137114433605739,0,0,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,2.09409497589519,14.1175557127443,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,1.17447824240415,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.679913719975421,0.979660166265606,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.856003649656029,0.611942816932982,0,0,0,0,0.137114433605739,0,0,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,2.09409497589519,14.1175557127443,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,1.17447824240415,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.679913719975421,0.979660166265606,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:75521256..75521268,+ | |short_description=p@chr2:75521256..75521268,+ | ||
}} | }} |
Revision as of 05:50, 15 November 2012
Short description: | p@chr2:75521256..75521268, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:75521256..75521268, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.62e-10 | 1 |
lymphocyte of B lineage | 6.88e-10 | 1 |
B cell | 6.88e-10 | 1 |
pro-B cell | 6.88e-10 | 1 |
lining cell | 8.42e-10 | 1 |
meso-epithelial cell | 8.42e-10 | 1 |
endothelial cell | 8.42e-10 | 1 |
endothelial cell of sinusoid | 8.42e-10 | 1 |
endothelial cell of hepatic sinusoid | 8.42e-10 | 1 |
lymphoid lineage restricted progenitor cell | 3.34e-07 | 12 |
hematopoietic cell | 6.49e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.49e-07 | 32 |
hematopoietic stem cell | 6.49e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.49e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bile duct | 8.42e-10 | 1 |
hepatic sinusoid | 8.42e-10 | 1 |
parenchyma | 8.42e-10 | 1 |
abdomen blood vessel | 8.42e-10 | 1 |
sinusoid | 8.42e-10 | 1 |
digestive system duct | 8.42e-10 | 1 |
abdominal segment blood vessel | 8.42e-10 | 1 |
trunk blood vessel | 8.42e-10 | 1 |
liver parenchyma | 8.42e-10 | 1 |
liver lobule | 8.42e-10 | 1 |
biliary system | 8.42e-10 | 1 |
biliary tree | 8.42e-10 | 1 |
biliary bud | 8.42e-10 | 1 |
hepatic duct | 8.42e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.