FFCP PHASE1:Mm9::chr14:58042891..58042930,+: Difference between revisions
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|id=chr14:58042891..58042930,+ | |id=chr14:58042891..58042930,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.15e-14!63;UBERON:0003056!2.25e-12!49;UBERON:0000153!3.34e-12!94;UBERON:0000955!1.93e-11!50;UBERON:0006238!1.93e-11!50;UBERON:0002616!6.10e-11!49;UBERON:0001049!1.26e-10!52;UBERON:0005068!1.26e-10!52;UBERON:0006241!1.26e-10!52;UBERON:0007135!1.26e-10!52;UBERON:0002346!3.49e-10!71;UBERON:0003075!3.49e-10!71;UBERON:0007284!3.49e-10!71;UBERON:0007811!3.93e-10!86;UBERON:0004121!9.86e-10!102;UBERON:0000924!9.86e-10!102;UBERON:0006601!9.86e-10!102;UBERON:0003080!1.01e-09!40;UBERON:0002780!3.25e-09!39;UBERON:0001890!3.25e-09!39;UBERON:0006240!3.25e-09!39;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0000468!2.12e-08!333;UBERON:0000073!4.68e-08!75;UBERON:0001016!4.68e-08!75;UBERON:0000475!2.57e-07!200;UBERON:0002020!3.33e-07!34;UBERON:0000922!5.22e-07!328;UBERON:0002021!5.32e-07!10;UBERON:0000411!5.32e-07!10;UBERON:0001950!5.32e-07!10;UBERON:0002791!9.45e-07!29;UBERON:0003528!9.45e-07!29;UBERON:0001893!9.45e-07!29 | |ontology_enrichment_uberon=UBERON:0000033!1.15e-14!63;UBERON:0003056!2.25e-12!49;UBERON:0000153!3.34e-12!94;UBERON:0000955!1.93e-11!50;UBERON:0006238!1.93e-11!50;UBERON:0002616!6.10e-11!49;UBERON:0001049!1.26e-10!52;UBERON:0005068!1.26e-10!52;UBERON:0006241!1.26e-10!52;UBERON:0007135!1.26e-10!52;UBERON:0002346!3.49e-10!71;UBERON:0003075!3.49e-10!71;UBERON:0007284!3.49e-10!71;UBERON:0007811!3.93e-10!86;UBERON:0004121!9.86e-10!102;UBERON:0000924!9.86e-10!102;UBERON:0006601!9.86e-10!102;UBERON:0003080!1.01e-09!40;UBERON:0002780!3.25e-09!39;UBERON:0001890!3.25e-09!39;UBERON:0006240!3.25e-09!39;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0000468!2.12e-08!333;UBERON:0000073!4.68e-08!75;UBERON:0001016!4.68e-08!75;UBERON:0000475!2.57e-07!200;UBERON:0002020!3.33e-07!34;UBERON:0000922!5.22e-07!328;UBERON:0002021!5.32e-07!10;UBERON:0000411!5.32e-07!10;UBERON:0001950!5.32e-07!10;UBERON:0002791!9.45e-07!29;UBERON:0003528!9.45e-07!29;UBERON:0001893!9.45e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,9.78e-13,73;UBERON:0003056,2.25e-12,49;UBERON:0002346,6.58e-12,64;UBERON:0003075,6.58e-12,64;UBERON:0007284,6.58e-12,64;UBERON:0000073,1.82e-11,54;UBERON:0004121,6.06e-11,95;UBERON:0000924,6.06e-11,95;UBERON:0006601,6.06e-11,95;UBERON:0001049,1.26e-10,52;UBERON:0005068,1.26e-10,52;UBERON:0006241,1.26e-10,52;UBERON:0007135,1.26e-10,52;UBERON:0000955,2.74e-10,47;UBERON:0006238,2.74e-10,47;UBERON:0002616,8.37e-10,46;UBERON:0003080,1.01e-09,40;UBERON:0002780,3.24e-09,39;UBERON:0001890,3.24e-09,39;UBERON:0006240,3.24e-09,39;UBERON:0001017,1.73e-08,73;UBERON:0001016,4.68e-08,75;UBERON:0002020,3.33e-07,34;UBERON:0002021,5.32e-07,10;UBERON:0000411,5.32e-07,10;UBERON:0001950,5.32e-07,10;UBERON:0003528,9.45e-07,29;UBERON:0002791,9.45e-07,29;UBERON:0001893,9.45e-07,29 | |||
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| ||
|short_description=p1@Ift88 | |short_description=p1@Ift88 | ||
}} | }} |
Revision as of 19:12, 13 November 2012
Short description: | p1@Ift88 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ift88_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | 0bp_to_ENSMUST00000039020, ENSMUST00000122063, ENSMUST00000150296, NM_009376, uc007udb.2_5end |
EntrezGene: | Ift88 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 9.78e-13 | 73 |
pre-chordal neural plate | 2.25e-12 | 49 |
neurectoderm | 6.58e-12 | 64 |
neural plate | 6.58e-12 | 64 |
presumptive neural plate | 6.58e-12 | 64 |
regional part of nervous system | 1.82e-11 | 54 |
ectoderm-derived structure | 6.06e-11 | 95 |
ectoderm | 6.06e-11 | 95 |
presumptive ectoderm | 6.06e-11 | 95 |
neural tube | 1.26e-10 | 52 |
neural rod | 1.26e-10 | 52 |
future spinal cord | 1.26e-10 | 52 |
neural keel | 1.26e-10 | 52 |
brain | 2.74e-10 | 47 |
future brain | 2.74e-10 | 47 |
regional part of brain | 8.37e-10 | 46 |
anterior neural tube | 1.01e-09 | 40 |
regional part of forebrain | 3.24e-09 | 39 |
forebrain | 3.24e-09 | 39 |
future forebrain | 3.24e-09 | 39 |
central nervous system | 1.73e-08 | 73 |
nervous system | 4.68e-08 | 75 |
gray matter | 3.33e-07 | 34 |
occipital lobe | 5.32e-07 | 10 |
visual cortex | 5.32e-07 | 10 |
neocortex | 5.32e-07 | 10 |
brain grey matter | 9.45e-07 | 29 |
regional part of telencephalon | 9.45e-07 | 29 |
telencephalon | 9.45e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.