FFCP PHASE1:Mm9::chr19:23215457..23215463,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:23215457..23215463,-|id=chr19:23215457..23215463,-|ontology_enrichment_celltype=CL:0000066!5.62e-13!25;CL:0002563!6.89e-13!9;CL:0002251!6.89e-13!9;CL:0000223!5.50e-12!20;CL:0000239!7.78e-09!6;CL:0000677!7.78e-09!6;CL:0000212!7.78e-09!6;CL:0000584!7.78e-09!6;CL:0000181!9.06e-08!5;CL:0000417!9.06e-08!5;CL:0000668!9.06e-08!5;CL:0000412!9.06e-08!5;CL:0000182!9.06e-08!5;CL:0000144!1.24e-07!121;CL:0000012!1.24e-07!121;CL:0000075!2.20e-07!7|ontology_enrichment_celltype_v019_2=CL:0000223,5.12e-32,20;CL:0000182,7.99e-26,5;CL:0000066,1.58e-25,25;CL:0002250,2.12e-25,3;CL:0002563,1.12e-22,9;CL:0002251,1.12e-22,9;CL:0002076,1.17e-13,15;CL:0000213,1.19e-09,1;CL:0002078,1.19e-09,1;CL:0000115,1.19e-09,1;CL:0002262,1.19e-09,1;CL:1000398,1.19e-09,1;CL:0002321,9.96e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!6.89e-13!9;UBERON:0004808!6.89e-13!9;UBERON:0001277!6.89e-13!9;UBERON:0000490!1.24e-12!66;UBERON:0000485!7.00e-12!11;UBERON:0001242!1.34e-11!13;UBERON:0000060!1.34e-11!13;UBERON:0001262!1.34e-11!13;UBERON:0004786!1.34e-11!13;UBERON:0000344!2.92e-11!15;UBERON:0003929!2.27e-09!55;UBERON:0005911!2.11e-07!69;UBERON:0004923!9.09e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.12e-22,9;UBERON:0004808,1.12e-22,9;UBERON:0001277,1.12e-22,9;UBERON:0000485,1.39e-18,11;UBERON:0001242,9.58e-16,13;UBERON:0001262,9.58e-16,13;UBERON:0004786,9.58e-16,13;UBERON:0000344,1.17e-13,15;UBERON:0003929,2.69e-11,55;UBERON:0002394,1.19e-09,1;UBERON:0001281,1.19e-09,1;UBERON:0000353,1.19e-09,1;UBERON:0003497,1.19e-09,1;UBERON:0003909,1.19e-09,1;UBERON:0003928,1.19e-09,1;UBERON:0003835,1.19e-09,1;UBERON:0003513,1.19e-09,1;UBERON:0001280,1.19e-09,1;UBERON:0004647,1.19e-09,1;UBERON:0002294,1.19e-09,1;UBERON:0001173,1.19e-09,1;UBERON:0004912,1.19e-09,1;UBERON:0005171,1.19e-09,1;UBERON:0000490,2.67e-09,66;UBERON:0005911,7.27e-09,69;UBERON:0004923,1.50e-08,24|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.60492842261366,2.00358291978539,1.34303417529512,0.934450562382103,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,4.33277429626912,3.15845826181135,7.75843553797003,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,0.125896817975577,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,4.63783181922684,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0.381210681219194,0,0.457500602818626,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0.402619256281115,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0.238968797952552,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr19:23215457..23215463,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:23215457..23215463,- | |||
|id=chr19:23215457..23215463,- | |||
|ontology_enrichment_celltype=CL:0000066!5.62e-13!25;CL:0002563!6.89e-13!9;CL:0002251!6.89e-13!9;CL:0000223!5.50e-12!20;CL:0000239!7.78e-09!6;CL:0000677!7.78e-09!6;CL:0000212!7.78e-09!6;CL:0000584!7.78e-09!6;CL:0000181!9.06e-08!5;CL:0000417!9.06e-08!5;CL:0000668!9.06e-08!5;CL:0000412!9.06e-08!5;CL:0000182!9.06e-08!5;CL:0000144!1.24e-07!121;CL:0000012!1.24e-07!121;CL:0000075!2.20e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,5.12e-32,20;CL:0000182,7.99e-26,5;CL:0000066,1.58e-25,25;CL:0002250,2.12e-25,3;CL:0002563,1.12e-22,9;CL:0002251,1.12e-22,9;CL:0002076,1.17e-13,15;CL:0000213,1.19e-09,1;CL:0002078,1.19e-09,1;CL:0000115,1.19e-09,1;CL:0002262,1.19e-09,1;CL:1000398,1.19e-09,1;CL:0002321,9.96e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!6.89e-13!9;UBERON:0004808!6.89e-13!9;UBERON:0001277!6.89e-13!9;UBERON:0000490!1.24e-12!66;UBERON:0000485!7.00e-12!11;UBERON:0001242!1.34e-11!13;UBERON:0000060!1.34e-11!13;UBERON:0001262!1.34e-11!13;UBERON:0004786!1.34e-11!13;UBERON:0000344!2.92e-11!15;UBERON:0003929!2.27e-09!55;UBERON:0005911!2.11e-07!69;UBERON:0004923!9.09e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.12e-22,9;UBERON:0004808,1.12e-22,9;UBERON:0001277,1.12e-22,9;UBERON:0000485,1.39e-18,11;UBERON:0001242,9.58e-16,13;UBERON:0001262,9.58e-16,13;UBERON:0004786,9.58e-16,13;UBERON:0000344,1.17e-13,15;UBERON:0003929,2.69e-11,55;UBERON:0002394,1.19e-09,1;UBERON:0001281,1.19e-09,1;UBERON:0000353,1.19e-09,1;UBERON:0003497,1.19e-09,1;UBERON:0003909,1.19e-09,1;UBERON:0003928,1.19e-09,1;UBERON:0003835,1.19e-09,1;UBERON:0003513,1.19e-09,1;UBERON:0001280,1.19e-09,1;UBERON:0004647,1.19e-09,1;UBERON:0002294,1.19e-09,1;UBERON:0001173,1.19e-09,1;UBERON:0004912,1.19e-09,1;UBERON:0005171,1.19e-09,1;UBERON:0000490,2.67e-09,66;UBERON:0005911,7.27e-09,69;UBERON:0004923,1.50e-08,24 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.60492842261366,2.00358291978539,1.34303417529512,0.934450562382103,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,4.33277429626912,3.15845826181135,7.75843553797003,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,0.125896817975577,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,4.63783181922684,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0.381210681219194,0,0.457500602818626,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0.402619256281115,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0.238968797952552,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr19:23215457..23215463,- | |||
}} |
Revision as of 17:13, 13 September 2013
Short description: | p@chr19:23215457..23215463, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:23215457..23215463, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 5.12e-32 | 20 |
hepatocyte | 7.99e-26 | 5 |
epithelial cell | 1.58e-25 | 25 |
intestinal crypt stem cell | 2.12e-25 | 3 |
intestinal epithelial cell | 1.12e-22 | 9 |
epithelial cell of alimentary canal | 1.12e-22 | 9 |
endo-epithelial cell | 1.17e-13 | 15 |
lining cell | 1.19e-09 | 1 |
meso-epithelial cell | 1.19e-09 | 1 |
endothelial cell | 1.19e-09 | 1 |
endothelial cell of sinusoid | 1.19e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.19e-09 | 1 |
embryonic cell | 9.96e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.12e-22 | 9 |
gastrointestinal system epithelium | 1.12e-22 | 9 |
intestinal epithelium | 1.12e-22 | 9 |
simple columnar epithelium | 1.39e-18 | 11 |
intestinal mucosa | 9.58e-16 | 13 |
wall of intestine | 9.58e-16 | 13 |
gastrointestinal system mucosa | 9.58e-16 | 13 |
mucosa | 1.17e-13 | 15 |
gut epithelium | 2.69e-11 | 55 |
bile duct | 1.19e-09 | 1 |
hepatic sinusoid | 1.19e-09 | 1 |
parenchyma | 1.19e-09 | 1 |
abdomen blood vessel | 1.19e-09 | 1 |
sinusoid | 1.19e-09 | 1 |
digestive system duct | 1.19e-09 | 1 |
abdominal segment blood vessel | 1.19e-09 | 1 |
trunk blood vessel | 1.19e-09 | 1 |
liver parenchyma | 1.19e-09 | 1 |
liver lobule | 1.19e-09 | 1 |
biliary system | 1.19e-09 | 1 |
biliary tree | 1.19e-09 | 1 |
biliary bud | 1.19e-09 | 1 |
hepatic duct | 1.19e-09 | 1 |
unilaminar epithelium | 2.67e-09 | 66 |
endo-epithelium | 7.27e-09 | 69 |
organ component layer | 1.50e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.