FFCP PHASE1:Mm9::chr8:35868112..35868121,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:35868112..35868121,+|id=chr8:35868112..35868121,+|ontology_enrichment_celltype=CL:0002563!7.26e-11!9;CL:0002251!7.26e-11!9;CL:0000066!2.25e-10!25;CL:0002076!1.39e-09!15;CL:0000223!3.84e-09!20;CL:0000239!1.70e-07!6;CL:0000677!1.70e-07!6;CL:0000212!1.70e-07!6;CL:0000584!1.70e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,8.81e-31,9;CL:0002251,8.81e-31,9;CL:0000223,5.73e-20,20;CL:0002076,1.26e-18,15;CL:0000239,4.12e-17,6;CL:0000677,4.12e-17,6;CL:0000584,4.12e-17,6;CL:0000066,5.20e-16,25;CL:0002250,7.42e-16,3;CL:0000075,8.94e-15,7;CL:0000213,2.01e-12,1;CL:0002078,2.01e-12,1;CL:0000115,2.01e-12,1;CL:0002262,2.01e-12,1;CL:1000398,2.01e-12,1;CL:0002321,1.15e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!7.26e-11!9;UBERON:0004808!7.26e-11!9;UBERON:0001277!7.26e-11!9;UBERON:0000485!2.39e-08!11;UBERON:0000344!4.63e-08!15;UBERON:0001242!6.11e-08!13;UBERON:0000060!6.11e-08!13;UBERON:0001262!6.11e-08!13;UBERON:0004786!6.11e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.81e-31,9;UBERON:0004808,8.81e-31,9;UBERON:0001277,8.81e-31,9;UBERON:0000485,2.91e-25,11;UBERON:0001242,1.95e-21,13;UBERON:0001262,1.95e-21,13;UBERON:0004786,1.95e-21,13;UBERON:0000344,1.26e-18,15;UBERON:0002394,2.01e-12,1;UBERON:0001281,2.01e-12,1;UBERON:0000353,2.01e-12,1;UBERON:0003497,2.01e-12,1;UBERON:0003909,2.01e-12,1;UBERON:0003928,2.01e-12,1;UBERON:0003835,2.01e-12,1;UBERON:0003513,2.01e-12,1;UBERON:0001280,2.01e-12,1;UBERON:0004647,2.01e-12,1;UBERON:0002294,2.01e-12,1;UBERON:0001173,2.01e-12,1;UBERON:0004912,2.01e-12,1;UBERON:0005171,2.01e-12,1;UBERON:0004923,9.57e-12,24;UBERON:0000160,3.87e-09,31;UBERON:0003929,2.66e-07,55|phase1_expression=0,1.74487703819681,0.454999239389536,1.51232105653415,3.00537437967808,0.33575854382378,0.467225281191051,0,0.422366166455,0.468129052643987,0,0,0,0,0,0,0,0,0,0.42438965179803,0.17008658030214,0,0,0,0.68822784320151,0.57423196411502,0.430761996159075,0.861884930743556,0.190023419456374,0,0,0,0,0,2.02196133825892,0.997407872150954,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0.191690942036473,0,0,0,0,0.395658863190582,0.182975287204819,1.04182674111352,0,0,0,0,0,0.186399445825301,0.37863096666592,0.0755715601067855,2.31891590961342,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26265113531884,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0,0.913394847343798,0.469343416127421,0,0,0,0.322928853391811,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p@chr8:35868112..35868121,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:35868112..35868121,+ | |||
|id=chr8:35868112..35868121,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.26e-11!9;CL:0002251!7.26e-11!9;CL:0000066!2.25e-10!25;CL:0002076!1.39e-09!15;CL:0000223!3.84e-09!20;CL:0000239!1.70e-07!6;CL:0000677!1.70e-07!6;CL:0000212!1.70e-07!6;CL:0000584!1.70e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.81e-31,9;CL:0002251,8.81e-31,9;CL:0000223,5.73e-20,20;CL:0002076,1.26e-18,15;CL:0000239,4.12e-17,6;CL:0000677,4.12e-17,6;CL:0000584,4.12e-17,6;CL:0000066,5.20e-16,25;CL:0002250,7.42e-16,3;CL:0000075,8.94e-15,7;CL:0000213,2.01e-12,1;CL:0002078,2.01e-12,1;CL:0000115,2.01e-12,1;CL:0002262,2.01e-12,1;CL:1000398,2.01e-12,1;CL:0002321,1.15e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!7.26e-11!9;UBERON:0004808!7.26e-11!9;UBERON:0001277!7.26e-11!9;UBERON:0000485!2.39e-08!11;UBERON:0000344!4.63e-08!15;UBERON:0001242!6.11e-08!13;UBERON:0000060!6.11e-08!13;UBERON:0001262!6.11e-08!13;UBERON:0004786!6.11e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.81e-31,9;UBERON:0004808,8.81e-31,9;UBERON:0001277,8.81e-31,9;UBERON:0000485,2.91e-25,11;UBERON:0001242,1.95e-21,13;UBERON:0001262,1.95e-21,13;UBERON:0004786,1.95e-21,13;UBERON:0000344,1.26e-18,15;UBERON:0002394,2.01e-12,1;UBERON:0001281,2.01e-12,1;UBERON:0000353,2.01e-12,1;UBERON:0003497,2.01e-12,1;UBERON:0003909,2.01e-12,1;UBERON:0003928,2.01e-12,1;UBERON:0003835,2.01e-12,1;UBERON:0003513,2.01e-12,1;UBERON:0001280,2.01e-12,1;UBERON:0004647,2.01e-12,1;UBERON:0002294,2.01e-12,1;UBERON:0001173,2.01e-12,1;UBERON:0004912,2.01e-12,1;UBERON:0005171,2.01e-12,1;UBERON:0004923,9.57e-12,24;UBERON:0000160,3.87e-09,31;UBERON:0003929,2.66e-07,55 | |||
|phase1_expression=0,1.74487703819681,0.454999239389536,1.51232105653415,3.00537437967808,0.33575854382378,0.467225281191051,0,0.422366166455,0.468129052643987,0,0,0,0,0,0,0,0,0,0.42438965179803,0.17008658030214,0,0,0,0.68822784320151,0.57423196411502,0.430761996159075,0.861884930743556,0.190023419456374,0,0,0,0,0,2.02196133825892,0.997407872150954,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0.191690942036473,0,0,0,0,0.395658863190582,0.182975287204819,1.04182674111352,0,0,0,0,0,0.186399445825301,0.37863096666592,0.0755715601067855,2.31891590961342,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26265113531884,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0,0.913394847343798,0.469343416127421,0,0,0,0.322928853391811,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr8:35868112..35868121,+ | |||
}} |
Revision as of 15:33, 14 September 2013
Short description: | p@chr8:35868112..35868121, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:35868112..35868121, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.81e-31 | 9 |
epithelial cell of alimentary canal | 8.81e-31 | 9 |
endodermal cell | 5.73e-20 | 20 |
endo-epithelial cell | 1.26e-18 | 15 |
brush border epithelial cell | 4.12e-17 | 6 |
gut absorptive cell | 4.12e-17 | 6 |
enterocyte | 4.12e-17 | 6 |
epithelial cell | 5.20e-16 | 25 |
intestinal crypt stem cell | 7.42e-16 | 3 |
columnar/cuboidal epithelial cell | 8.94e-15 | 7 |
lining cell | 2.01e-12 | 1 |
meso-epithelial cell | 2.01e-12 | 1 |
endothelial cell | 2.01e-12 | 1 |
endothelial cell of sinusoid | 2.01e-12 | 1 |
endothelial cell of hepatic sinusoid | 2.01e-12 | 1 |
embryonic cell | 1.15e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.81e-31 | 9 |
gastrointestinal system epithelium | 8.81e-31 | 9 |
intestinal epithelium | 8.81e-31 | 9 |
simple columnar epithelium | 2.91e-25 | 11 |
intestinal mucosa | 1.95e-21 | 13 |
wall of intestine | 1.95e-21 | 13 |
gastrointestinal system mucosa | 1.95e-21 | 13 |
mucosa | 1.26e-18 | 15 |
bile duct | 2.01e-12 | 1 |
hepatic sinusoid | 2.01e-12 | 1 |
parenchyma | 2.01e-12 | 1 |
abdomen blood vessel | 2.01e-12 | 1 |
sinusoid | 2.01e-12 | 1 |
digestive system duct | 2.01e-12 | 1 |
abdominal segment blood vessel | 2.01e-12 | 1 |
trunk blood vessel | 2.01e-12 | 1 |
liver parenchyma | 2.01e-12 | 1 |
liver lobule | 2.01e-12 | 1 |
biliary system | 2.01e-12 | 1 |
biliary tree | 2.01e-12 | 1 |
biliary bud | 2.01e-12 | 1 |
hepatic duct | 2.01e-12 | 1 |
organ component layer | 9.57e-12 | 24 |
intestine | 3.87e-09 | 31 |
gut epithelium | 2.66e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.