FFCP PHASE1:Mm9::chr16:48772122..48772143,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77647|HGNC=|MCL_coexpression_id=33|UniProt=Q3UU67|association_with_transcript=-53bp_to_ENSMUST00000170861,NM_198297,uc007zjr.1,uc007zjs.1_5end|description=CAGE_peak_2_at_Trat1_5end|id=chr16:48772122..48772143,-|ontology_enrichment_celltype=CL:0000084!4.36e-13!11;CL:0000827!4.36e-13!11;CL:0000838!1.11e-11!12;CL:0000791!2.34e-11!9;CL:0000789!2.34e-11!9;CL:0002420!2.34e-11!9;CL:0002419!2.34e-11!9;CL:0000790!2.34e-11!9;CL:0000542!1.70e-10!13;CL:0000051!1.70e-10!13;CL:0000624!2.33e-10!8;CL:0002031!3.18e-09!25;CL:0000893!5.22e-08!6;CL:0002489!5.22e-08!6;CL:0000898!5.22e-08!6;CL:0000809!5.22e-08!6;CL:0000810!5.22e-08!6;CL:0000895!5.22e-08!6;CL:0000808!5.22e-08!6;CL:0000894!5.22e-08!6;CL:0000806!5.22e-08!6;CL:0000807!5.22e-08!6;CL:0000805!5.22e-08!6;CL:0002425!5.22e-08!6;CL:0002436!5.22e-08!6;CL:0002427!5.22e-08!6;CL:0002428!5.22e-08!6;CL:0002429!5.22e-08!6;CL:0002433!5.22e-08!6;CL:0002431!5.22e-08!6;CL:0002432!5.22e-08!6;CL:0000738!3.37e-07!17;CL:0002087!3.37e-07!17;CL:0000988!5.33e-07!32;CL:0002032!5.33e-07!32;CL:0000037!5.33e-07!32;CL:0000566!5.33e-07!32;CL:0000837!5.33e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,1.68e-25,9;CL:0000789,1.68e-25,9;CL:0002420,1.68e-25,9;CL:0002419,1.68e-25,9;CL:0000790,1.68e-25,9;CL:0000084,3.89e-25,11;CL:0000827,3.89e-25,11;CL:0000624,4.68e-23,8;CL:0000838,7.00e-23,12;CL:0000542,5.68e-21,13;CL:0000051,5.68e-21,13;CL:0000893,2.60e-17,6;CL:0002489,2.60e-17,6;CL:0000898,2.60e-17,6;CL:0000809,2.60e-17,6;CL:0000810,2.60e-17,6;CL:0000895,2.60e-17,6;CL:0000808,2.60e-17,6;CL:0000894,2.60e-17,6;CL:0000806,2.60e-17,6;CL:0000807,2.60e-17,6;CL:0000805,2.60e-17,6;CL:0002425,2.60e-17,6;CL:0002436,2.60e-17,6;CL:0002427,2.60e-17,6;CL:0002428,2.60e-17,6;CL:0002429,2.60e-17,6;CL:0002433,2.60e-17,6;CL:0002431,2.60e-17,6;CL:0002432,2.60e-17,6;CL:0002031,9.40e-17,25;CL:0000738,1.40e-15,17;CL:0002087,1.40e-15,17;CL:0000988,1.71e-12,32;CL:0002032,1.71e-12,32;CL:0000037,1.71e-12,32;CL:0000837,1.71e-12,32;CL:0002320,7.01e-08,46;CL:0000134,7.01e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.92e-23!29;UBERON:0002193!1.13e-20!48;UBERON:0002390!1.07e-19!45;UBERON:0003061!1.07e-19!45;UBERON:0002370!5.95e-19!23;UBERON:0000974!5.95e-19!23;UBERON:0004807!5.95e-19!23;UBERON:0005058!5.95e-19!23;UBERON:0003351!5.95e-19!23;UBERON:0009113!5.95e-19!23;UBERON:0003295!5.95e-19!23;UBERON:0009722!5.95e-19!23;UBERON:0005562!5.95e-19!23;UBERON:0007690!5.95e-19!23;UBERON:0006562!7.67e-18!24;UBERON:0003408!7.67e-18!24;UBERON:0001557!7.67e-18!24;UBERON:0001042!7.67e-18!24;UBERON:0008814!7.67e-18!24;UBERON:0009145!7.67e-18!24;UBERON:0000072!5.09e-15!27;UBERON:0000065!7.67e-15!41;UBERON:0001004!2.90e-14!42;UBERON:0000063!3.89e-11!35;UBERON:0002405!1.47e-10!70;UBERON:0005057!3.03e-09!51;UBERON:0003081!4.54e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.45e-43,23;UBERON:0000974,7.45e-43,23;UBERON:0004807,7.45e-43,23;UBERON:0005058,7.45e-43,23;UBERON:0003351,7.45e-43,23;UBERON:0009113,7.45e-43,23;UBERON:0003295,7.45e-43,23;UBERON:0009722,7.45e-43,23;UBERON:0005562,7.45e-43,23;UBERON:0007690,7.45e-43,23;UBERON:0006562,6.81e-41,24;UBERON:0003408,6.81e-41,24;UBERON:0001557,6.81e-41,24;UBERON:0001042,6.81e-41,24;UBERON:0008814,6.81e-41,24;UBERON:0009145,6.81e-41,24;UBERON:0004177,1.43e-36,29;UBERON:0005057,1.43e-36,29;UBERON:0000072,6.99e-36,27;UBERON:0002193,4.98e-30,48;UBERON:0002405,4.98e-30,48;UBERON:0000077,1.51e-29,35;UBERON:0002390,1.83e-29,45;UBERON:0003061,1.83e-29,45;UBERON:0007811,7.45e-26,36;UBERON:0000065,1.28e-24,41;UBERON:0001004,6.30e-24,42;UBERON:0000153,5.91e-21,43;UBERON:0003929,1.85e-15,55;UBERON:0002368,8.09e-14,60;UBERON:0003081,7.31e-13,87;UBERON:0005911,7.78e-13,69;UBERON:0002530,1.97e-12,65;UBERON:0000490,3.52e-12,66;UBERON:0001041,1.13e-11,80;UBERON:0000949,8.15e-11,72;UBERON:0004921,1.31e-08,114;UBERON:0001007,2.24e-08,116;UBERON:0001555,2.24e-08,116;UBERON:0007026,2.24e-08,116;UBERON:0004119,3.76e-08,118;UBERON:0000925,3.76e-08,118;UBERON:0006595,3.76e-08,118;UBERON:0000926,5.67e-08,120;UBERON:0004120,5.67e-08,120;UBERON:0006603,5.67e-08,120;UBERON:0002384,7.01e-08,46|phase1_expression=0,0,0,0,0,0,0,44.5475465873438,9.43284438416167,12.6394844213876,11.6428218393343,11.4871908953284,61.1186605854404,60.5823388763652,0.666219523631325,0.607425802169478,0,2.83915948822414,3.56497527374921,1.27316895539409,0.935476191661768,3.47518329203099,0.522399578277871,0,0.22940928106717,0,0,0,0.950117097281869,0.252030129759931,1.10865255327652,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7963663786693,10.7550015725588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.68510327831436,12.9468941823586,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.4385999622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| ||
|EntrezGene=77647 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=Q3UU67 | |||
|association_with_transcript=-53bp_to_ENSMUST00000170861,NM_198297,uc007zjr.1,uc007zjs.1_5end | |||
|description=CAGE_peak_2_at_Trat1_5end | |||
|id=chr16:48772122..48772143,- | |||
|ontology_enrichment_celltype=CL:0000084!4.36e-13!11;CL:0000827!4.36e-13!11;CL:0000838!1.11e-11!12;CL:0000791!2.34e-11!9;CL:0000789!2.34e-11!9;CL:0002420!2.34e-11!9;CL:0002419!2.34e-11!9;CL:0000790!2.34e-11!9;CL:0000542!1.70e-10!13;CL:0000051!1.70e-10!13;CL:0000624!2.33e-10!8;CL:0002031!3.18e-09!25;CL:0000893!5.22e-08!6;CL:0002489!5.22e-08!6;CL:0000898!5.22e-08!6;CL:0000809!5.22e-08!6;CL:0000810!5.22e-08!6;CL:0000895!5.22e-08!6;CL:0000808!5.22e-08!6;CL:0000894!5.22e-08!6;CL:0000806!5.22e-08!6;CL:0000807!5.22e-08!6;CL:0000805!5.22e-08!6;CL:0002425!5.22e-08!6;CL:0002436!5.22e-08!6;CL:0002427!5.22e-08!6;CL:0002428!5.22e-08!6;CL:0002429!5.22e-08!6;CL:0002433!5.22e-08!6;CL:0002431!5.22e-08!6;CL:0002432!5.22e-08!6;CL:0000738!3.37e-07!17;CL:0002087!3.37e-07!17;CL:0000988!5.33e-07!32;CL:0002032!5.33e-07!32;CL:0000037!5.33e-07!32;CL:0000566!5.33e-07!32;CL:0000837!5.33e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.68e-25,9;CL:0000789,1.68e-25,9;CL:0002420,1.68e-25,9;CL:0002419,1.68e-25,9;CL:0000790,1.68e-25,9;CL:0000084,3.89e-25,11;CL:0000827,3.89e-25,11;CL:0000624,4.68e-23,8;CL:0000838,7.00e-23,12;CL:0000542,5.68e-21,13;CL:0000051,5.68e-21,13;CL:0000893,2.60e-17,6;CL:0002489,2.60e-17,6;CL:0000898,2.60e-17,6;CL:0000809,2.60e-17,6;CL:0000810,2.60e-17,6;CL:0000895,2.60e-17,6;CL:0000808,2.60e-17,6;CL:0000894,2.60e-17,6;CL:0000806,2.60e-17,6;CL:0000807,2.60e-17,6;CL:0000805,2.60e-17,6;CL:0002425,2.60e-17,6;CL:0002436,2.60e-17,6;CL:0002427,2.60e-17,6;CL:0002428,2.60e-17,6;CL:0002429,2.60e-17,6;CL:0002433,2.60e-17,6;CL:0002431,2.60e-17,6;CL:0002432,2.60e-17,6;CL:0002031,9.40e-17,25;CL:0000738,1.40e-15,17;CL:0002087,1.40e-15,17;CL:0000988,1.71e-12,32;CL:0002032,1.71e-12,32;CL:0000037,1.71e-12,32;CL:0000837,1.71e-12,32;CL:0002320,7.01e-08,46;CL:0000134,7.01e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.92e-23!29;UBERON:0002193!1.13e-20!48;UBERON:0002390!1.07e-19!45;UBERON:0003061!1.07e-19!45;UBERON:0002370!5.95e-19!23;UBERON:0000974!5.95e-19!23;UBERON:0004807!5.95e-19!23;UBERON:0005058!5.95e-19!23;UBERON:0003351!5.95e-19!23;UBERON:0009113!5.95e-19!23;UBERON:0003295!5.95e-19!23;UBERON:0009722!5.95e-19!23;UBERON:0005562!5.95e-19!23;UBERON:0007690!5.95e-19!23;UBERON:0006562!7.67e-18!24;UBERON:0003408!7.67e-18!24;UBERON:0001557!7.67e-18!24;UBERON:0001042!7.67e-18!24;UBERON:0008814!7.67e-18!24;UBERON:0009145!7.67e-18!24;UBERON:0000072!5.09e-15!27;UBERON:0000065!7.67e-15!41;UBERON:0001004!2.90e-14!42;UBERON:0000063!3.89e-11!35;UBERON:0002405!1.47e-10!70;UBERON:0005057!3.03e-09!51;UBERON:0003081!4.54e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.45e-43,23;UBERON:0000974,7.45e-43,23;UBERON:0004807,7.45e-43,23;UBERON:0005058,7.45e-43,23;UBERON:0003351,7.45e-43,23;UBERON:0009113,7.45e-43,23;UBERON:0003295,7.45e-43,23;UBERON:0009722,7.45e-43,23;UBERON:0005562,7.45e-43,23;UBERON:0007690,7.45e-43,23;UBERON:0006562,6.81e-41,24;UBERON:0003408,6.81e-41,24;UBERON:0001557,6.81e-41,24;UBERON:0001042,6.81e-41,24;UBERON:0008814,6.81e-41,24;UBERON:0009145,6.81e-41,24;UBERON:0004177,1.43e-36,29;UBERON:0005057,1.43e-36,29;UBERON:0000072,6.99e-36,27;UBERON:0002193,4.98e-30,48;UBERON:0002405,4.98e-30,48;UBERON:0000077,1.51e-29,35;UBERON:0002390,1.83e-29,45;UBERON:0003061,1.83e-29,45;UBERON:0007811,7.45e-26,36;UBERON:0000065,1.28e-24,41;UBERON:0001004,6.30e-24,42;UBERON:0000153,5.91e-21,43;UBERON:0003929,1.85e-15,55;UBERON:0002368,8.09e-14,60;UBERON:0003081,7.31e-13,87;UBERON:0005911,7.78e-13,69;UBERON:0002530,1.97e-12,65;UBERON:0000490,3.52e-12,66;UBERON:0001041,1.13e-11,80;UBERON:0000949,8.15e-11,72;UBERON:0004921,1.31e-08,114;UBERON:0001007,2.24e-08,116;UBERON:0001555,2.24e-08,116;UBERON:0007026,2.24e-08,116;UBERON:0004119,3.76e-08,118;UBERON:0000925,3.76e-08,118;UBERON:0006595,3.76e-08,118;UBERON:0000926,5.67e-08,120;UBERON:0004120,5.67e-08,120;UBERON:0006603,5.67e-08,120;UBERON:0002384,7.01e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,44.5475465873438,9.43284438416167,12.6394844213876,11.6428218393343,11.4871908953284,61.1186605854404,60.5823388763652,0.666219523631325,0.607425802169478,0,2.83915948822414,3.56497527374921,1.27316895539409,0.935476191661768,3.47518329203099,0.522399578277871,0,0.22940928106717,0,0,0,0.950117097281869,0.252030129759931,1.10865255327652,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7963663786693,10.7550015725588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.68510327831436,12.9468941823586,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0,0.268412837520744,0,0,1.65209391491899,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.502518772325447,0,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.172684981865896,1.3018415272336,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0,0.0603129249281559,0,0.328281799490123,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.376736914009382,1.0935538217682,0.457556346413045,0,0,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,37.289312234125,0.202725215290164,3.08132871494482,9.09445760844565,21.3041767844303,41.3257217945031,26.3228034448732,29.8332844892646,41.1943115788442,26.1389346826649,33.0709887248837,36.1568737544481,42.6218458466659,48.0364067966248,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@Trat1 | |||
}} |
Revision as of 12:49, 13 September 2013
Short description: | p2@Trat1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -53bp_to_ENSMUST00000170861, NM_198297, uc007zjr.1, uc007zjs.1_5end |
EntrezGene: | Trat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.