FFCP PHASE1:Hg19::chr10:127623331..127623333,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127623331..127623333,+|id=chr10:127623331..127623333,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;2.60e-10;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;1.08e-19;1!UBERON:0010122;2.60e-10;2!UBERON:0004161;1.49e-07;11!UBERON:0003056;1.93e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4929;2.60e-10;2|ontology_enrichment_disease_v019_2=DOID:4929,3.58e-10,2|ontology_enrichment_uberon=UBERON:0007023!1.71e-12!115;UBERON:0002616!4.67e-10!59;UBERON:0001049!6.74e-10!57;UBERON:0005068!6.74e-10!57;UBERON:0006241!6.74e-10!57;UBERON:0007135!6.74e-10!57;UBERON:0000955!7.76e-09!69;UBERON:0006238!7.76e-09!69;UBERON:0005743!8.16e-09!86;UBERON:0000073!9.76e-09!94;UBERON:0001016!9.76e-09!94;UBERON:0002780!1.32e-08!41;UBERON:0001890!1.32e-08!41;UBERON:0006240!1.32e-08!41;UBERON:0001017!2.02e-08!82;UBERON:0002346!2.64e-08!90;UBERON:0003080!3.11e-08!42;UBERON:0003075!8.64e-08!86;UBERON:0007284!8.64e-08!86;UBERON:0002020!1.87e-07!34;UBERON:0003528!1.87e-07!34;UBERON:0001893!3.77e-07!34;UBERON:0000153!4.06e-07!129;UBERON:0007811!4.06e-07!129;UBERON:0003056!5.86e-07!61;UBERON:0002791!7.44e-07!33;UBERON:0000033!9.67e-07!123|ontology_enrichment_uberon_v019=UBERON:0000941;1.08e-19;1!UBERON:0001785;1.08e-19;1!UBERON:0002464;1.08e-19;1!UBERON:0004904;1.08e-19;1!UBERON:0001021;1.08e-19;1!UBERON:0007195;2.97e-19;1!UBERON:0004913;2.97e-19;1!UBERON:0003703;2.97e-19;1!UBERON:0001174;2.97e-19;1!UBERON:0004914;2.97e-19;1!UBERON:0003714;1.57e-10;2!UBERON:0005162;1.57e-10;2!UBERON:0000122;1.57e-10;2!UBERON:0001873;2.60e-10;2!UBERON:0001896;2.71e-07;3!UBERON:0002114;2.71e-07;2!UBERON:0005383;2.71e-07;3!UBERON:0005290;2.71e-07;3!UBERON:0005382;2.71e-07;3!UBERON:0002423;3.96e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.95e-20,1;UBERON:0001785,8.95e-20,1;UBERON:0002464,8.95e-20,1;UBERON:0004904,8.95e-20,1;UBERON:0001021,8.95e-20,1;UBERON:0003902,8.95e-20,1;UBERON:0005425,8.95e-20,1;UBERON:0007195,4.69e-19,1;UBERON:0004913,5.62e-19,1;UBERON:0003703,5.62e-19,1;UBERON:0001174,5.62e-19,1;UBERON:0004914,5.62e-19,1;UBERON:0003714,1.43e-10,2;UBERON:0005162,1.43e-10,2;UBERON:0000122,1.43e-10,2;UBERON:0001873,1.89e-10,2;UBERON:0010122,1.89e-10,2;UBERON:0008835,5.66e-08,22;UBERON:0003894,5.66e-08,22;UBERON:0009854,1.19e-07,23;UBERON:0005383,2.19e-07,3;UBERON:0005382,2.19e-07,3;UBERON:0001896,2.32e-07,3;UBERON:0005290,2.32e-07,3;UBERON:0010096,2.32e-07,3;UBERON:0002114,3.35e-07,2;UBERON:0007499,4.41e-07,25;UBERON:0009497,4.41e-07,25;UBERON:0000015,4.41e-07,25;UBERON:0002423,4.41e-07,25;UBERON:0006235,4.41e-07,25;UBERON:0004161,4.41e-07,25;UBERON:0009856,7.88e-07,26|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.087834785693126,0.982343066232845,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:127623331..127623333,+ | |||
|id=chr10:127623331..127623333,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.08e-19;1!UBERON:0010122;2.60e-10;2!UBERON:0004161;1.49e-07;11!UBERON:0003056;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-12!115;UBERON:0002616!4.67e-10!59;UBERON:0001049!6.74e-10!57;UBERON:0005068!6.74e-10!57;UBERON:0006241!6.74e-10!57;UBERON:0007135!6.74e-10!57;UBERON:0000955!7.76e-09!69;UBERON:0006238!7.76e-09!69;UBERON:0005743!8.16e-09!86;UBERON:0000073!9.76e-09!94;UBERON:0001016!9.76e-09!94;UBERON:0002780!1.32e-08!41;UBERON:0001890!1.32e-08!41;UBERON:0006240!1.32e-08!41;UBERON:0001017!2.02e-08!82;UBERON:0002346!2.64e-08!90;UBERON:0003080!3.11e-08!42;UBERON:0003075!8.64e-08!86;UBERON:0007284!8.64e-08!86;UBERON:0002020!1.87e-07!34;UBERON:0003528!1.87e-07!34;UBERON:0001893!3.77e-07!34;UBERON:0000153!4.06e-07!129;UBERON:0007811!4.06e-07!129;UBERON:0003056!5.86e-07!61;UBERON:0002791!7.44e-07!33;UBERON:0000033!9.67e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.08e-19;1!UBERON:0001785;1.08e-19;1!UBERON:0002464;1.08e-19;1!UBERON:0004904;1.08e-19;1!UBERON:0001021;1.08e-19;1!UBERON:0007195;2.97e-19;1!UBERON:0004913;2.97e-19;1!UBERON:0003703;2.97e-19;1!UBERON:0001174;2.97e-19;1!UBERON:0004914;2.97e-19;1!UBERON:0003714;1.57e-10;2!UBERON:0005162;1.57e-10;2!UBERON:0000122;1.57e-10;2!UBERON:0001873;2.60e-10;2!UBERON:0001896;2.71e-07;3!UBERON:0002114;2.71e-07;2!UBERON:0005383;2.71e-07;3!UBERON:0005290;2.71e-07;3!UBERON:0005382;2.71e-07;3!UBERON:0002423;3.96e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.95e-20,1;UBERON:0001785,8.95e-20,1;UBERON:0002464,8.95e-20,1;UBERON:0004904,8.95e-20,1;UBERON:0001021,8.95e-20,1;UBERON:0003902,8.95e-20,1;UBERON:0005425,8.95e-20,1;UBERON:0007195,4.69e-19,1;UBERON:0004913,5.62e-19,1;UBERON:0003703,5.62e-19,1;UBERON:0001174,5.62e-19,1;UBERON:0004914,5.62e-19,1;UBERON:0003714,1.43e-10,2;UBERON:0005162,1.43e-10,2;UBERON:0000122,1.43e-10,2;UBERON:0001873,1.89e-10,2;UBERON:0010122,1.89e-10,2;UBERON:0008835,5.66e-08,22;UBERON:0003894,5.66e-08,22;UBERON:0009854,1.19e-07,23;UBERON:0005383,2.19e-07,3;UBERON:0005382,2.19e-07,3;UBERON:0001896,2.32e-07,3;UBERON:0005290,2.32e-07,3;UBERON:0010096,2.32e-07,3;UBERON:0002114,3.35e-07,2;UBERON:0007499,4.41e-07,25;UBERON:0009497,4.41e-07,25;UBERON:0000015,4.41e-07,25;UBERON:0002423,4.41e-07,25;UBERON:0006235,4.41e-07,25;UBERON:0004161,4.41e-07,25;UBERON:0009856,7.88e-07,26 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.087834785693126,0.982343066232845,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,0,0,0,0.422008249231538,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,1.77148277162768,0.361789315876224,0,0,0.295547618953547,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0.46112780877612,0.179515288819544,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0.489698424477443,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0.134802265961354,0,0,0,0,0.485560759068186,0.394584402849391,1.20990716048664,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0.261177619741208,0.698906672968121,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0,1.17847017308398,0,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0,0,0.360299883542404,1.16495949527454,0,0,0,0.393709926058995,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0.121499113316049,0.335434687599266,0.315222829196793,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,2.65013777824443,0.129282956361551,0.39669780522807,0,0.704815022316672,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.751145584238999,1.72022758707021,0.776503360757966,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0.657852148736121,0,0,0.337884881306145,0.256241518587947,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0,0.33946505990805,0,0.619678821295011,0,0,0,0,0.705351887381368,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0.645902582527404,2.85538840518309,0.490738592505128,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,1.03499260351932,0.0675375846183947,0,0.620060389503552,0,0,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0.47775168788705,0.214429632529969,0,0.23248285073625,0,0.801711364730253,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,0,0.470317296361523,0.245148321753905,0,0,0.594092800654172,0,0.169927114687817,0.0939839179798536,0,0.0999411559249289,0.357107877211315,0,0.0802413666891683,0.730336388246517,0,0.143339583151451,0.631086248772738,0.0679914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| |||
|short_description=p@chr10:127623331..127623333,+ | |||
}} |
Revision as of 12:16, 10 September 2013
Short description: | p@chr10:127623331..127623333, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127623331..127623333, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.95e-20 | 1 |
cranial nerve | 8.95e-20 | 1 |
nerve trunk | 8.95e-20 | 1 |
nerve connecting eye with brain | 8.95e-20 | 1 |
nerve | 8.95e-20 | 1 |
retinal neural layer | 8.95e-20 | 1 |
presumptive neural retina | 8.95e-20 | 1 |
stroma of bone marrow | 4.69e-19 | 1 |
hepatopancreatic ampulla | 5.62e-19 | 1 |
extrahepatic bile duct | 5.62e-19 | 1 |
common bile duct | 5.62e-19 | 1 |
duodenal papilla | 5.62e-19 | 1 |
neural tissue | 1.43e-10 | 2 |
multi cell component structure | 1.43e-10 | 2 |
neuron projection bundle | 1.43e-10 | 2 |
caudate nucleus | 1.89e-10 | 2 |
future caudate nucleus | 1.89e-10 | 2 |
hepatic diverticulum | 5.66e-08 | 22 |
liver primordium | 5.66e-08 | 22 |
digestive tract diverticulum | 1.19e-07 | 23 |
caudate-putamen | 2.19e-07 | 3 |
dorsal striatum | 2.19e-07 | 3 |
medulla oblongata | 2.32e-07 | 3 |
myelencephalon | 2.32e-07 | 3 |
future myelencephalon | 2.32e-07 | 3 |
duodenum | 3.35e-07 | 2 |
epithelial sac | 4.41e-07 | 25 |
epithelium of foregut-midgut junction | 4.41e-07 | 25 |
anatomical boundary | 4.41e-07 | 25 |
hepatobiliary system | 4.41e-07 | 25 |
foregut-midgut junction | 4.41e-07 | 25 |
septum transversum | 4.41e-07 | 25 |
sac | 7.88e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.58e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.