FFCP PHASE1:Hg19::chr11:104893886..104893907,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=838|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1506|TSSclassifier=W|UniProt=A8MZ63,P51878|association_with_transcript=0bp_to_ENST00000393139,ENST00000393141,ENST00000418434,ENST00000444749,NM_001136109,NM_001136110,NM_001136112,NM_004347,NR_024239,NR_036562,uc009yxh.2,uc010ruz.1,uc010rva.1,uc010rvb.1,uc010rvc.1,uc010rvd.1_5end|coexpression_cluster_id=C0|description=CAGE_peak_1_at_CASP5_5end|id=chr11:104893886..104893907,-|ontology_enrichment_celltype=CL:0002057!1.12e-45!42;CL:0000860!2.20e-41!45;CL:0000766!3.11e-41!76;CL:0002194!1.66e-38!63;CL:0000576!1.66e-38!63;CL:0000040!1.66e-38!63;CL:0000559!1.66e-38!63;CL:0002009!1.09e-36!65;CL:0000839!1.30e-32!70;CL:0000557!7.23e-32!71;CL:0000763!9.36e-21!112;CL:0000049!9.36e-21!112;CL:0000738!3.07e-19!140;CL:0002087!1.76e-18!119;CL:0002031!1.97e-14!124;CL:0000037!1.24e-11!172;CL:0000566!1.24e-11!172;CL:0002032!4.41e-11!165;CL:0000837!4.41e-11!165;CL:0002393!1.10e-10!9;CL:0002397!1.10e-10!9;CL:0000988!6.51e-10!182;CL:0000094!1.57e-08!8|ontology_enrichment_celltype_v019=CL:0000860;9.74e-60;33!CL:0002057;9.74e-60;33!CL:0000473;9.09e-52;39!CL:0000234;9.09e-52;39!CL:0000576;6.96e-44;48!CL:0000766;1.66e-34;69!CL:0000763;2.05e-14;100!CL:0002393;1.83e-12;6!CL:0002397;1.83e-12;6!CL:0000094;1.18e-11;8!CL:0002087;1.19e-10;104!CL:0000738;5.88e-09;136!CL:0000081;3.71e-08;11!CL:0000875;1.19e-07;3!CL:0002396;1.19e-07;3!CL:0000775;1.30e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,4.56e-85,48;CL:0000234,4.56e-85,48;CL:0000860,1.80e-83,42;CL:0002057,1.80e-83,42;CL:0000766,1.02e-69,72;CL:0002194,4.12e-65,59;CL:0000576,4.12e-65,59;CL:0000040,4.12e-65,59;CL:0000559,4.12e-65,59;CL:0002009,1.54e-62,61;CL:0000839,8.72e-57,66;CL:0000557,9.75e-56,67;CL:0000763,2.33e-41,108;CL:0000049,2.33e-41,108;CL:0000738,2.57e-35,136;CL:0002087,1.42e-32,115;CL:0002031,1.88e-26,120;CL:0000037,1.56e-25,168;CL:0002032,7.64e-24,161;CL:0000837,7.64e-24,161;CL:0000988,1.97e-23,177;CL:0002393,2.10e-18,9;CL:0002397,2.10e-18,9;CL:0000094,1.26e-11,8;CL:0000081,3.87e-08,11;CL:0000875,1.22e-07,3;CL:0002396,1.22e-07,3;CL:0000775,1.27e-07,3|ontology_enrichment_development_v019=CL:0002057;2.00e-59;42!CL:0000049;2.39e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.75e-38!102;UBERON:0003061!9.75e-38!102;UBERON:0002193!2.31e-35!112;UBERON:0002371!2.34e-27!80;UBERON:0007023!7.63e-27!115;UBERON:0001474!3.95e-25!86;UBERON:0002405!8.91e-24!115;UBERON:0004765!2.67e-19!101;UBERON:0001434!2.67e-19!101;UBERON:0003081!9.04e-12!216;UBERON:0000923!3.21e-10!604;UBERON:0005291!3.21e-10!604;UBERON:0006598!3.21e-10!604;UBERON:0002532!3.21e-10!604;UBERON:0002050!3.99e-10!605;UBERON:0005423!3.99e-10!605;UBERON:0000467!4.92e-10!625;UBERON:0000480!6.11e-10!626;UBERON:0000922!6.85e-10!612;UBERON:0001049!9.68e-10!57;UBERON:0005068!9.68e-10!57;UBERON:0006241!9.68e-10!57;UBERON:0007135!9.68e-10!57;UBERON:0000178!1.28e-09!15;UBERON:0000179!1.28e-09!15;UBERON:0000463!1.28e-09!15;UBERON:0000062!5.41e-09!511;UBERON:0002204!8.37e-09!167;UBERON:0002780!5.88e-08!41;UBERON:0001890!5.88e-08!41;UBERON:0006240!5.88e-08!41;UBERON:0000468!9.78e-08!659;UBERON:0003080!1.30e-07!42;UBERON:0002616!1.41e-07!59|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-17;15!UBERON:0000179;1.29e-17;15!UBERON:0000463;1.29e-17;15!UBERON:0002390;2.78e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-65,98;UBERON:0003061,1.36e-65,98;UBERON:0002193,3.37e-60,108;UBERON:0002371,9.99e-50,76;UBERON:0001474,4.46e-45,82;UBERON:0002405,5.14e-44,93;UBERON:0004765,7.70e-40,90;UBERON:0001434,1.78e-34,100;UBERON:0003081,8.18e-24,203;UBERON:0000178,1.29e-17,15;UBERON:0000179,1.29e-17,15;UBERON:0000463,1.29e-17,15;UBERON:0002204,2.67e-16,167;UBERON:0000926,1.32e-12,315;UBERON:0004120,1.32e-12,315;UBERON:0006603,1.32e-12,315;UBERON:0000923,1.30e-07,560;UBERON:0010316,1.30e-07,560;UBERON:0005291,1.30e-07,560;UBERON:0006598,1.30e-07,560;UBERON:0010317,1.30e-07,560;UBERON:0002532,1.30e-07,560;UBERON:0002050,2.05e-07,564|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.39334510984468,0,0,0,0,0,0,8.30993112797816,3.60980005446255,3.03815219002193,0.223915474239924,0.647787332037959,0.77272670290256,2.32637182047304,4.53451132426571,4.60909716256851,14.6430293250581,11.1015329765893,23.2279778171328,34.2353946863359,38.6802666858942,62.9042731503637,11.3766074643084,10.973239620925,14.8969135253776,4.1413314699373,4.91231070104122,12.3597916444797,12.8555234795779,15.4045932996525,14.0654167675789,31.6657248179247,35.5045310566505,63.5074878293714,43.5313857942876,48.795129323438,109.616715823221,27.6373531782418,36.5038042894141,48.433112369241,41.7725656817024,53.7685348541844,111.07829799175,15.4216359007718,24.0242858960499,9.85395633889367,2.47122988522289,2.55300717830561,1.28580469357664,10.5454715184262,54.7020862297498,27.399623064695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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=838 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1506 | |||
|TSSclassifier=W | |||
|UniProt=A8MZ63,P51878 | |||
|association_with_transcript=0bp_to_ENST00000393139,ENST00000393141,ENST00000418434,ENST00000444749,NM_001136109,NM_001136110,NM_001136112,NM_004347,NR_024239,NR_036562,uc009yxh.2,uc010ruz.1,uc010rva.1,uc010rvb.1,uc010rvc.1,uc010rvd.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_CASP5_5end | |||
|id=chr11:104893886..104893907,- | |||
|ontology_enrichment_celltype=CL:0002057!1.12e-45!42;CL:0000860!2.20e-41!45;CL:0000766!3.11e-41!76;CL:0002194!1.66e-38!63;CL:0000576!1.66e-38!63;CL:0000040!1.66e-38!63;CL:0000559!1.66e-38!63;CL:0002009!1.09e-36!65;CL:0000839!1.30e-32!70;CL:0000557!7.23e-32!71;CL:0000763!9.36e-21!112;CL:0000049!9.36e-21!112;CL:0000738!3.07e-19!140;CL:0002087!1.76e-18!119;CL:0002031!1.97e-14!124;CL:0000037!1.24e-11!172;CL:0000566!1.24e-11!172;CL:0002032!4.41e-11!165;CL:0000837!4.41e-11!165;CL:0002393!1.10e-10!9;CL:0002397!1.10e-10!9;CL:0000988!6.51e-10!182;CL:0000094!1.57e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.74e-60;33!CL:0002057;9.74e-60;33!CL:0000473;9.09e-52;39!CL:0000234;9.09e-52;39!CL:0000576;6.96e-44;48!CL:0000766;1.66e-34;69!CL:0000763;2.05e-14;100!CL:0002393;1.83e-12;6!CL:0002397;1.83e-12;6!CL:0000094;1.18e-11;8!CL:0002087;1.19e-10;104!CL:0000738;5.88e-09;136!CL:0000081;3.71e-08;11!CL:0000875;1.19e-07;3!CL:0002396;1.19e-07;3!CL:0000775;1.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.56e-85,48;CL:0000234,4.56e-85,48;CL:0000860,1.80e-83,42;CL:0002057,1.80e-83,42;CL:0000766,1.02e-69,72;CL:0002194,4.12e-65,59;CL:0000576,4.12e-65,59;CL:0000040,4.12e-65,59;CL:0000559,4.12e-65,59;CL:0002009,1.54e-62,61;CL:0000839,8.72e-57,66;CL:0000557,9.75e-56,67;CL:0000763,2.33e-41,108;CL:0000049,2.33e-41,108;CL:0000738,2.57e-35,136;CL:0002087,1.42e-32,115;CL:0002031,1.88e-26,120;CL:0000037,1.56e-25,168;CL:0002032,7.64e-24,161;CL:0000837,7.64e-24,161;CL:0000988,1.97e-23,177;CL:0002393,2.10e-18,9;CL:0002397,2.10e-18,9;CL:0000094,1.26e-11,8;CL:0000081,3.87e-08,11;CL:0000875,1.22e-07,3;CL:0002396,1.22e-07,3;CL:0000775,1.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-59;42!CL:0000049;2.39e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.75e-38!102;UBERON:0003061!9.75e-38!102;UBERON:0002193!2.31e-35!112;UBERON:0002371!2.34e-27!80;UBERON:0007023!7.63e-27!115;UBERON:0001474!3.95e-25!86;UBERON:0002405!8.91e-24!115;UBERON:0004765!2.67e-19!101;UBERON:0001434!2.67e-19!101;UBERON:0003081!9.04e-12!216;UBERON:0000923!3.21e-10!604;UBERON:0005291!3.21e-10!604;UBERON:0006598!3.21e-10!604;UBERON:0002532!3.21e-10!604;UBERON:0002050!3.99e-10!605;UBERON:0005423!3.99e-10!605;UBERON:0000467!4.92e-10!625;UBERON:0000480!6.11e-10!626;UBERON:0000922!6.85e-10!612;UBERON:0001049!9.68e-10!57;UBERON:0005068!9.68e-10!57;UBERON:0006241!9.68e-10!57;UBERON:0007135!9.68e-10!57;UBERON:0000178!1.28e-09!15;UBERON:0000179!1.28e-09!15;UBERON:0000463!1.28e-09!15;UBERON:0000062!5.41e-09!511;UBERON:0002204!8.37e-09!167;UBERON:0002780!5.88e-08!41;UBERON:0001890!5.88e-08!41;UBERON:0006240!5.88e-08!41;UBERON:0000468!9.78e-08!659;UBERON:0003080!1.30e-07!42;UBERON:0002616!1.41e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-17;15!UBERON:0000179;1.29e-17;15!UBERON:0000463;1.29e-17;15!UBERON:0002390;2.78e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-65,98;UBERON:0003061,1.36e-65,98;UBERON:0002193,3.37e-60,108;UBERON:0002371,9.99e-50,76;UBERON:0001474,4.46e-45,82;UBERON:0002405,5.14e-44,93;UBERON:0004765,7.70e-40,90;UBERON:0001434,1.78e-34,100;UBERON:0003081,8.18e-24,203;UBERON:0000178,1.29e-17,15;UBERON:0000179,1.29e-17,15;UBERON:0000463,1.29e-17,15;UBERON:0002204,2.67e-16,167;UBERON:0000926,1.32e-12,315;UBERON:0004120,1.32e-12,315;UBERON:0006603,1.32e-12,315;UBERON:0000923,1.30e-07,560;UBERON:0010316,1.30e-07,560;UBERON:0005291,1.30e-07,560;UBERON:0006598,1.30e-07,560;UBERON:0010317,1.30e-07,560;UBERON:0002532,1.30e-07,560;UBERON:0002050,2.05e-07,564 | |||
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| |||
|short_description=p1@CASP5 | |||
}} |
Revision as of 15:27, 10 September 2013
Short description: | p1@CASP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CASP5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000393139, ENST00000393141, ENST00000418434, ENST00000444749, NM_001136109, NM_001136110, NM_001136112, NM_004347, NR_024239, NR_036562, uc009yxh.2, uc010ruz.1, uc010rva.1, uc010rvb.1, uc010rvc.1, uc010rvd.1_5end |
EntrezGene: | CASP5 |
HGNC: | 1506 |
UniProt: | A8MZ63P51878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.56e-85 | 48 |
phagocyte | 4.56e-85 | 48 |
classical monocyte | 1.80e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.80e-83 | 42 |
myeloid leukocyte | 1.02e-69 | 72 |
monopoietic cell | 4.12e-65 | 59 |
monocyte | 4.12e-65 | 59 |
monoblast | 4.12e-65 | 59 |
promonocyte | 4.12e-65 | 59 |
macrophage dendritic cell progenitor | 1.54e-62 | 61 |
myeloid lineage restricted progenitor cell | 8.72e-57 | 66 |
granulocyte monocyte progenitor cell | 9.75e-56 | 67 |
myeloid cell | 2.33e-41 | 108 |
common myeloid progenitor | 2.33e-41 | 108 |
leukocyte | 2.57e-35 | 136 |
nongranular leukocyte | 1.42e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 1.88e-26 | 120 |
hematopoietic stem cell | 1.56e-25 | 168 |
hematopoietic oligopotent progenitor cell | 7.64e-24 | 161 |
hematopoietic multipotent progenitor cell | 7.64e-24 | 161 |
hematopoietic cell | 1.97e-23 | 177 |
intermediate monocyte | 2.10e-18 | 9 |
CD14-positive, CD16-positive monocyte | 2.10e-18 | 9 |
granulocyte | 1.26e-11 | 8 |
blood cell | 3.87e-08 | 11 |
non-classical monocyte | 1.22e-07 | 3 |
CD14-low, CD16-positive monocyte | 1.22e-07 | 3 |
neutrophil | 1.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-65 | 98 |
blood island | 1.36e-65 | 98 |
hemolymphoid system | 3.37e-60 | 108 |
bone marrow | 9.99e-50 | 76 |
bone element | 4.46e-45 | 82 |
immune system | 5.14e-44 | 93 |
skeletal element | 7.70e-40 | 90 |
skeletal system | 1.78e-34 | 100 |
lateral plate mesoderm | 8.18e-24 | 203 |
blood | 1.29e-17 | 15 |
haemolymphatic fluid | 1.29e-17 | 15 |
organism substance | 1.29e-17 | 15 |
musculoskeletal system | 2.67e-16 | 167 |
mesoderm | 1.32e-12 | 315 |
mesoderm-derived structure | 1.32e-12 | 315 |
presumptive mesoderm | 1.32e-12 | 315 |
germ layer | 1.30e-07 | 560 |
germ layer / neural crest | 1.30e-07 | 560 |
embryonic tissue | 1.30e-07 | 560 |
presumptive structure | 1.30e-07 | 560 |
germ layer / neural crest derived structure | 1.30e-07 | 560 |
epiblast (generic) | 1.30e-07 | 560 |
embryonic structure | 2.05e-07 | 564 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.