FFCP PHASE1:Hg19::chr12:108154925..108154945,-: Difference between revisions
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{{FFCP | 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.14231179832004,1.40136081656895,0.913158720509496,0.863710364874486,2.8665101273223,1.92986669276972,1.73814972905999,1.16241425368125,1.73858272302579,1.60342272946051,1.86494547746733,1.7071847709395,2.76503864725637,0.430227358820278,2.12997601315018,2.13033511897894,0.846774100381858,2.06196181689645,1.5510319283216,0.955538938977433,1.90154234056247,0.883352102537187,1.46301509978723,0,1.53994210284371,0,1.94284397223656,1.87151570769685,0.596852325484105,2.49732190632894,1.46829906650648,2.30875085165401,1.20770274853339,2.08370226891451,1.31135736302374,2.35158648180761,0.980593287015622,0.942706188406504,1.57046773691956,0.891139200981258,1.6906229103336,1.18948980281472,1.12780701575824,1.16024198352439,1.29923502702408,0.71421575442263,1.05868461514708,3.20965466756673,0.730336388246517,0.458729283404541,1.72007499781742,2.20880187070458,2.71965960763659,2.18175345170189,0.5290268405154,0.743990036333503,2.77305377178851,0.432626562123789,0.378499274505237,1.52971800749174,0.760191006068622,0.815910637935854,2.13773924212448,1.37842349302267,0.752122617877125,2.1218035501107,0.535928260312357,2.48750831837634,2.0686599172379,1.0661699095049,1.66645102024618,1.16260037704811,1.61394257169231,0.560659312903067,1.78212043178862,0.606351566874658,1.08858373948481,1.02669990325584,1.41439311330634,1.29099969706817,0,1.13964576055364,1.92109222579888,0,0.898252021065869,2.34640942403454,1.4668973301944,3.25516942652591,3.32878387092756,1.40891655513718,0.961705476909699|short_description=p2@PRDM4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=11108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9348 | |||
|TSSclassifier=S | |||
|UniProt=Q9UKN5 | |||
|association_with_transcript=0bp_to_ENST00000228437_5end | |||
|description=CAGE_peak_2_at_PRDM4_5end | |||
|id=chr12:108154925..108154945,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.73e-11!94;UBERON:0001016!1.73e-11!94;UBERON:0005743!8.35e-11!86;UBERON:0001017!4.48e-10!82;UBERON:0000955!9.99e-10!69;UBERON:0006238!9.99e-10!69;UBERON:0004121!2.75e-09!169;UBERON:0000924!7.61e-09!173;UBERON:0006601!7.61e-09!173;UBERON:0002780!9.25e-09!41;UBERON:0001890!9.25e-09!41;UBERON:0006240!9.25e-09!41;UBERON:0002616!1.03e-08!59;UBERON:0001049!2.09e-08!57;UBERON:0005068!2.09e-08!57;UBERON:0006241!2.09e-08!57;UBERON:0007135!2.09e-08!57;UBERON:0003080!5.38e-08!42;UBERON:0000033!7.63e-08!123;UBERON:0003075!1.07e-07!86;UBERON:0007284!1.07e-07!86;UBERON:0003056!1.38e-07!61;UBERON:0000153!1.59e-07!129;UBERON:0007811!1.59e-07!129;UBERON:0002020!2.17e-07!34;UBERON:0003528!2.17e-07!34;UBERON:0001893!2.38e-07!34;UBERON:0002346!4.26e-07!90;UBERON:0001869!4.66e-07!32;UBERON:0002791!6.31e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.01e-07;34!UBERON:0003528;9.37e-07;34!UBERON:0002020;9.37e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-11,89;UBERON:0000955,9.14e-11,68;UBERON:0006238,9.14e-11,68;UBERON:0001017,1.17e-10,81;UBERON:0000073,5.28e-10,53;UBERON:0002616,5.28e-10,53;UBERON:0001049,1.39e-09,56;UBERON:0005068,1.39e-09,56;UBERON:0006241,1.39e-09,56;UBERON:0007135,1.39e-09,56;UBERON:0002780,2.71e-09,41;UBERON:0001890,2.71e-09,41;UBERON:0003080,2.71e-09,41;UBERON:0006240,2.71e-09,41;UBERON:0004121,5.34e-09,171;UBERON:0000924,5.34e-09,171;UBERON:0006601,5.34e-09,171;UBERON:0003056,2.58e-08,61;UBERON:0003075,7.24e-08,82;UBERON:0007284,7.24e-08,82;UBERON:0003528,7.41e-08,34;UBERON:0002020,7.41e-08,34;UBERON:0001893,8.16e-08,34;UBERON:0001869,1.65e-07,32;UBERON:0002346,2.73e-07,86;UBERON:0002791,3.65e-07,32;UBERON:0010371,9.25e-07,104 | |||
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| |||
|short_description=p2@PRDM4 | |||
}} |
Revision as of 20:40, 10 September 2013
Short description: | p2@PRDM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PRDM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000228437_5end |
EntrezGene: | PRDM4 |
HGNC: | 9348 |
UniProt: | Q9UKN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.27e-11 | 89 |
brain | 9.14e-11 | 68 |
future brain | 9.14e-11 | 68 |
central nervous system | 1.17e-10 | 81 |
regional part of nervous system | 5.28e-10 | 53 |
regional part of brain | 5.28e-10 | 53 |
neural tube | 1.39e-09 | 56 |
neural rod | 1.39e-09 | 56 |
future spinal cord | 1.39e-09 | 56 |
neural keel | 1.39e-09 | 56 |
regional part of forebrain | 2.71e-09 | 41 |
forebrain | 2.71e-09 | 41 |
anterior neural tube | 2.71e-09 | 41 |
future forebrain | 2.71e-09 | 41 |
ectoderm-derived structure | 5.34e-09 | 171 |
ectoderm | 5.34e-09 | 171 |
presumptive ectoderm | 5.34e-09 | 171 |
pre-chordal neural plate | 2.58e-08 | 61 |
neural plate | 7.24e-08 | 82 |
presumptive neural plate | 7.24e-08 | 82 |
brain grey matter | 7.41e-08 | 34 |
gray matter | 7.41e-08 | 34 |
telencephalon | 8.16e-08 | 34 |
cerebral hemisphere | 1.65e-07 | 32 |
neurectoderm | 2.73e-07 | 86 |
regional part of telencephalon | 3.65e-07 | 32 |
ecto-epithelium | 9.25e-07 | 104 |
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