FFCP PHASE1:Hg19::chr19:35759473..35759521,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7392 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12594 | |||
|TSSclassifier=W | |||
|UniProt=Q15853,Q6YI47 | |||
|association_with_transcript=-374bp_to_ENST00000222305,ENST00000343550,NM_003367,NM_207291,uc002nyq.1,uc002nyr.1,uc002nys.1,uc002nyt.1,uc010xss.1_5end | |||
|description=CAGE_peak_3_at_USF2_5end | |||
|id=chr19:35759473..35759521,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;6.14e-09;41!UBERON:0001890;6.14e-09;41!UBERON:0001893;7.92e-09;34!UBERON:0003528;1.22e-08;34!UBERON:0002020;1.22e-08;34!UBERON:0000073;1.59e-08;53!UBERON:0002616;1.59e-08;53!UBERON:0001869;2.55e-08;32!UBERON:0002619;2.56e-08;22!UBERON:0002791;2.84e-08;32!UBERON:0001950;4.57e-08;20!UBERON:0000956;8.29e-07;25!UBERON:0000203;8.29e-07;25 | |||
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| |||
|short_description=p3@USF2 | |||
}} |
Revision as of 20:08, 11 September 2013
Short description: | p3@USF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_USF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -374bp_to_ENST00000222305, ENST00000343550, NM_003367, NM_207291, uc002nyq.1, uc002nyr.1, uc002nys.1, uc002nyt.1, uc010xss.1_5end |
EntrezGene: | USF2 |
HGNC: | 12594 |
UniProt: | Q15853Q6YI47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.47e-19 | 114 |
neural tube | 1.62e-15 | 56 |
neural rod | 1.62e-15 | 56 |
future spinal cord | 1.62e-15 | 56 |
neural keel | 1.62e-15 | 56 |
regional part of nervous system | 2.08e-14 | 53 |
regional part of brain | 2.08e-14 | 53 |
ecto-epithelium | 2.07e-12 | 104 |
regional part of forebrain | 3.19e-12 | 41 |
forebrain | 3.19e-12 | 41 |
anterior neural tube | 3.19e-12 | 41 |
future forebrain | 3.19e-12 | 41 |
neural plate | 6.02e-12 | 82 |
presumptive neural plate | 6.02e-12 | 82 |
neurectoderm | 1.10e-10 | 86 |
brain grey matter | 1.97e-10 | 34 |
gray matter | 1.97e-10 | 34 |
telencephalon | 2.12e-10 | 34 |
pre-chordal neural plate | 8.18e-10 | 61 |
cerebral hemisphere | 1.84e-09 | 32 |
regional part of telencephalon | 2.01e-09 | 32 |
central nervous system | 2.94e-09 | 81 |
regional part of cerebral cortex | 1.95e-08 | 22 |
brain | 2.93e-08 | 68 |
future brain | 2.93e-08 | 68 |
neocortex | 4.15e-08 | 20 |
tube | 2.73e-07 | 192 |
anatomical conduit | 4.11e-07 | 240 |
cerebral cortex | 4.30e-07 | 25 |
pallium | 4.30e-07 | 25 |
nervous system | 4.32e-07 | 89 |
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