FFCP PHASE1:Hg19::chr3:50192739..50192831,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6405 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10728 | |||
|TSSclassifier=S | |||
|UniProt=C9IYS6 | |||
|association_with_transcript=-12bp_to_ENST00000426511_5end | |||
|description=CAGE_peak_4_at_SEMA3F_5end | |||
|id=chr3:50192739..50192831,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.02e-22!254;CL:0002078!6.46e-19!44;CL:0000115!9.34e-17!35;CL:0002139!1.61e-16!24;CL:0002321!1.72e-15!248;CL:0000220!1.98e-15!246;CL:0000213!5.21e-14!57;CL:0000215!5.21e-14!57;CL:0000071!6.56e-13!18;CL:0002546!6.56e-13!18;CL:0000222!7.22e-12!119;CL:0000076!5.85e-10!62;CL:1000449!1.38e-09!16;CL:1000497!9.15e-09!18;CL:0002518!9.15e-09!18;CL:0002681!5.95e-08!13;CL:0002584!5.95e-08!13;CL:1000507!7.11e-08!12;CL:1000494!7.11e-08!12;CL:1000413!1.51e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.01e-22;24!CL:0000115;1.45e-20;36!CL:0000071;2.25e-17;18!CL:0002078;1.21e-16;45!CL:0000213;5.09e-11;58!CL:0000215;5.09e-11;58!CL:1000449;6.61e-11;15!CL:1000497;2.38e-10;17!CL:0002518;2.38e-10;17!CL:1000413;6.97e-10;9!CL:0002681;8.99e-09;12!CL:0002584;8.99e-09;12!CL:1000507;2.10e-08;10!CL:1000494;2.10e-08;10!CL:0002544;5.56e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,9.40e-25,45;CL:0000115,4.46e-24,36;CL:0002139,3.22e-22,24;CL:0000066,1.61e-19,253;CL:0000071,3.16e-17,18;CL:0002546,3.16e-17,18;CL:0000213,7.75e-17,58;CL:0000215,7.75e-17,58;CL:0002321,1.24e-12,250;CL:0000222,8.12e-12,121;CL:1000449,3.85e-11,15;CL:1000497,1.56e-10,17;CL:0002518,1.56e-10,17;CL:1000413,7.87e-10,9;CL:0002681,6.70e-09,12;CL:0002584,6.70e-09,12;CL:1000507,1.07e-08,10;CL:1000494,1.07e-08,10;CL:0000076,9.55e-08,63;CL:0002544,5.98e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.25e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.25e-17;18!UBERON:0001986;2.25e-17;18!UBERON:0004852;2.25e-17;18!UBERON:0006914;3.32e-13;25!UBERON:0000487;9.56e-13;22!UBERON:0006554;1.13e-11;30!UBERON:0001008;1.13e-11;30!UBERON:0000353;4.56e-11;15!UBERON:0006555;6.61e-11;15!UBERON:0004819;6.61e-11;15!UBERON:0001285;6.61e-11;15!UBERON:0007684;6.61e-11;15!UBERON:0003915;6.97e-10;9!UBERON:0004700;6.97e-10;9!UBERON:0001917;6.97e-10;9!UBERON:0000490;1.12e-09;33!UBERON:0002113;4.14e-09;24!UBERON:0011143;4.14e-09;24!UBERON:0001225;8.99e-09;12!UBERON:0008987;8.99e-09;12!UBERON:0001851;1.28e-08;15!UBERON:0004211;2.10e-08;10!UBERON:0009773;2.10e-08;10!UBERON:0001231;2.10e-08;10!UBERON:0004810;2.10e-08;10!UBERON:0000489;7.03e-08;29!UBERON:0003914;2.15e-07;74!UBERON:0000055;3.61e-07;65!UBERON:0000025;4.94e-07;93!UBERON:0005172;7.42e-07;52!UBERON:0005173;7.42e-07;52 | |||
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| |||
|short_description=p4@SEMA3F | |||
}} |
Revision as of 00:36, 13 September 2013
Short description: | p4@SEMA3F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SEMA3F_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000426511_5end |
EntrezGene: | SEMA3F |
HGNC: | 10728 |
UniProt: | C9IYS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 9.40e-25 | 45 |
endothelial cell | 4.46e-24 | 36 |
endothelial cell of vascular tree | 3.22e-22 | 24 |
epithelial cell | 1.61e-19 | 253 |
blood vessel endothelial cell | 3.16e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.16e-17 | 18 |
lining cell | 7.75e-17 | 58 |
barrier cell | 7.75e-17 | 58 |
embryonic cell | 1.24e-12 | 250 |
mesodermal cell | 8.12e-12 | 121 |
epithelial cell of nephron | 3.85e-11 | 15 |
kidney cell | 1.56e-10 | 17 |
kidney epithelial cell | 1.56e-10 | 17 |
endothelial cell of artery | 7.87e-10 | 9 |
kidney cortical cell | 6.70e-09 | 12 |
renal cortical epithelial cell | 6.70e-09 | 12 |
kidney tubule cell | 1.07e-08 | 10 |
nephron tubule epithelial cell | 1.07e-08 | 10 |
squamous epithelial cell | 9.55e-08 | 63 |
aortic endothelial cell | 5.98e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.