FFCP PHASE1:Hg19::chr3:119298397..119298409,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=141|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=269|TSSclassifier=S|UniProt=|association_with_transcript=22bp_to_ENST00000485496_5end|coexpression_cluster_id=C2675|description=CAGE_peak_5_at_ADPRH_5end|id=chr3:119298397..119298409,+|ontology_enrichment_celltype=CL:0000557!3.49e-32!71;CL:0002057!1.14e-31!42;CL:0002009!4.15e-29!65;CL:0000860!3.32e-28!45;CL:0000839!4.11e-28!70;CL:0002194!2.30e-27!63;CL:0000576!2.30e-27!63;CL:0000040!2.30e-27!63;CL:0000559!2.30e-27!63;CL:0000766!1.27e-26!76;CL:0000763!2.26e-18!112;CL:0000049!2.26e-18!112;CL:0000738!3.33e-17!140;CL:0002031!1.08e-15!124;CL:0002087!6.89e-15!119;CL:0000988!1.01e-12!182;CL:0000037!3.21e-12!172;CL:0000566!3.21e-12!172;CL:0002032!1.52e-11!165;CL:0000837!1.52e-11!165;CL:0002393!4.96e-07!9;CL:0002397!4.96e-07!9|ontology_enrichment_celltype_v019=CL:0000860;1.86e-61;33!CL:0002057;1.86e-61;33!CL:0000473;1.43e-41;39!CL:0000234;1.43e-41;39!CL:0000576;1.31e-40;48!CL:0000766;9.78e-28;69!CL:0002393;3.21e-13;6!CL:0002397;3.21e-13;6!CL:0000763;1.97e-12;100!CL:0000349;5.48e-11;19!CL:0002537;4.05e-10;5!CL:0002087;5.29e-09;104!CL:0001014;8.36e-08;2!CL:0001016;8.36e-08;2!CL:0000738;1.54e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,4.20e-73,42;CL:0002057,4.20e-73,42;CL:0000473,8.39e-63,48;CL:0000234,8.39e-63,48;CL:0000557,1.46e-60,67;CL:0002009,2.41e-53,61;CL:0000766,5.98e-52,72;CL:0000839,1.77e-51,66;CL:0002194,2.17e-48,59;CL:0000576,2.17e-48,59;CL:0000040,2.17e-48,59;CL:0000559,2.17e-48,59;CL:0000763,9.98e-38,108;CL:0000049,9.98e-38,108;CL:0002031,2.09e-29,120;CL:0000738,8.67e-28,136;CL:0002032,3.50e-23,161;CL:0000837,3.50e-23,161;CL:0000037,4.69e-23,168;CL:0002087,3.88e-22,115;CL:0000988,2.47e-21,177;CL:0000349,5.86e-11,19;CL:0000134,2.17e-10,354;CL:0002320,5.85e-10,361;CL:0002537,6.56e-10,5;CL:0002393,1.33e-08,9;CL:0002397,1.33e-08,9;CL:0000219,1.89e-08,386;CL:0001014,7.14e-08,2;CL:0001016,7.14e-08,2;CL:0000048,3.57e-07,427;CL:0000723,6.50e-07,433|ontology_enrichment_development_v019=CL:0002057;2.09e-51;42!CL:0000049;1.45e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.34e-29!112;UBERON:0002371!2.45e-28!80;UBERON:0002390!7.57e-27!102;UBERON:0003061!7.57e-27!102;UBERON:0001474!1.63e-24!86;UBERON:0002405!2.44e-23!115;UBERON:0003081!5.36e-22!216;UBERON:0004765!1.81e-19!101;UBERON:0001434!1.81e-19!101;UBERON:0002204!1.20e-10!167;UBERON:0005631!2.09e-09!14;UBERON:0000158!2.09e-09!14|ontology_enrichment_uberon_v019=UBERON:0000305;5.18e-15;7!UBERON:0005631;9.01e-14;10!UBERON:0000158;9.01e-14;10!UBERON:0000478;1.98e-10;24!UBERON:0001987;3.09e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.72e-58,76;UBERON:0001474,4.63e-53,82;UBERON:0002405,1.16e-50,93;UBERON:0004765,1.97e-47,90;UBERON:0002390,3.59e-45,98;UBERON:0003061,3.59e-45,98;UBERON:0002193,1.81e-44,108;UBERON:0001434,1.19e-41,100;UBERON:0003081,1.44e-34,203;UBERON:0002204,9.41e-21,167;UBERON:0005631,2.73e-19,14;UBERON:0000158,2.73e-19,14;UBERON:0000926,1.25e-17,315;UBERON:0004120,1.25e-17,315;UBERON:0006603,1.25e-17,315;UBERON:0000305,8.04e-15,7;UBERON:0004871,6.97e-13,8;UBERON:0000478,2.13e-10,24;UBERON:0002384,2.26e-09,371;UBERON:0001987,3.00e-07,4;UBERON:0004340,3.00e-07,4;UBERON:0003124,5.87e-07,7|phase1_expression=0.363356758541113,0.856402095563933,0,0,0,0,0,0,0,0,0.697801167972428,1.96597234917155,1.05506791291381,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.458480434487708,0.328402357799783,0,1.18009283054671,0,1.08371286321253,0,0,0,0,0,1.17440175733939,4.9859586767869,5.61524452916397,5.4252717678963,0.447830948479849,0.32389366601898,0.257575567634187,0.726991193897824,1.51150377475524,1.69808842831471,1.85943229524548,3.70051099219643,3.40677007984614,3.45230870786581,3.58624989140741,2.60130452877444,2.06847408441971,1.29096936716765,0,0.752969358170419,1.91034305040492,0.449446968890169,3.06083892370903,5.1348644332175,3.83602275479425,2.96866170168044,2.79249120670285,2.55734850319616,1.45104619314292,3.40431134814684,2.4912889959823,3.26623264833766,4.69334626578181,1.95469960234605,2.42159801053347,1.84138817993782,2.84816148696796,1.26753171787165,0.212604299965044,1.25795187305026,1.12328631146495,1.05123824989054,0.48217676009124,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0,0.732186172644509,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.2532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606466|short_description=p5@ADPRH}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=269 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=22bp_to_ENST00000485496_5end | |||
|coexpression_cluster_id=C2675 | |||
|description=CAGE_peak_5_at_ADPRH_5end | |||
|id=chr3:119298397..119298409,+ | |||
|ontology_enrichment_celltype=CL:0000557!3.49e-32!71;CL:0002057!1.14e-31!42;CL:0002009!4.15e-29!65;CL:0000860!3.32e-28!45;CL:0000839!4.11e-28!70;CL:0002194!2.30e-27!63;CL:0000576!2.30e-27!63;CL:0000040!2.30e-27!63;CL:0000559!2.30e-27!63;CL:0000766!1.27e-26!76;CL:0000763!2.26e-18!112;CL:0000049!2.26e-18!112;CL:0000738!3.33e-17!140;CL:0002031!1.08e-15!124;CL:0002087!6.89e-15!119;CL:0000988!1.01e-12!182;CL:0000037!3.21e-12!172;CL:0000566!3.21e-12!172;CL:0002032!1.52e-11!165;CL:0000837!1.52e-11!165;CL:0002393!4.96e-07!9;CL:0002397!4.96e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-61;33!CL:0002057;1.86e-61;33!CL:0000473;1.43e-41;39!CL:0000234;1.43e-41;39!CL:0000576;1.31e-40;48!CL:0000766;9.78e-28;69!CL:0002393;3.21e-13;6!CL:0002397;3.21e-13;6!CL:0000763;1.97e-12;100!CL:0000349;5.48e-11;19!CL:0002537;4.05e-10;5!CL:0002087;5.29e-09;104!CL:0001014;8.36e-08;2!CL:0001016;8.36e-08;2!CL:0000738;1.54e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.20e-73,42;CL:0002057,4.20e-73,42;CL:0000473,8.39e-63,48;CL:0000234,8.39e-63,48;CL:0000557,1.46e-60,67;CL:0002009,2.41e-53,61;CL:0000766,5.98e-52,72;CL:0000839,1.77e-51,66;CL:0002194,2.17e-48,59;CL:0000576,2.17e-48,59;CL:0000040,2.17e-48,59;CL:0000559,2.17e-48,59;CL:0000763,9.98e-38,108;CL:0000049,9.98e-38,108;CL:0002031,2.09e-29,120;CL:0000738,8.67e-28,136;CL:0002032,3.50e-23,161;CL:0000837,3.50e-23,161;CL:0000037,4.69e-23,168;CL:0002087,3.88e-22,115;CL:0000988,2.47e-21,177;CL:0000349,5.86e-11,19;CL:0000134,2.17e-10,354;CL:0002320,5.85e-10,361;CL:0002537,6.56e-10,5;CL:0002393,1.33e-08,9;CL:0002397,1.33e-08,9;CL:0000219,1.89e-08,386;CL:0001014,7.14e-08,2;CL:0001016,7.14e-08,2;CL:0000048,3.57e-07,427;CL:0000723,6.50e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-51;42!CL:0000049;1.45e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.34e-29!112;UBERON:0002371!2.45e-28!80;UBERON:0002390!7.57e-27!102;UBERON:0003061!7.57e-27!102;UBERON:0001474!1.63e-24!86;UBERON:0002405!2.44e-23!115;UBERON:0003081!5.36e-22!216;UBERON:0004765!1.81e-19!101;UBERON:0001434!1.81e-19!101;UBERON:0002204!1.20e-10!167;UBERON:0005631!2.09e-09!14;UBERON:0000158!2.09e-09!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;5.18e-15;7!UBERON:0005631;9.01e-14;10!UBERON:0000158;9.01e-14;10!UBERON:0000478;1.98e-10;24!UBERON:0001987;3.09e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.72e-58,76;UBERON:0001474,4.63e-53,82;UBERON:0002405,1.16e-50,93;UBERON:0004765,1.97e-47,90;UBERON:0002390,3.59e-45,98;UBERON:0003061,3.59e-45,98;UBERON:0002193,1.81e-44,108;UBERON:0001434,1.19e-41,100;UBERON:0003081,1.44e-34,203;UBERON:0002204,9.41e-21,167;UBERON:0005631,2.73e-19,14;UBERON:0000158,2.73e-19,14;UBERON:0000926,1.25e-17,315;UBERON:0004120,1.25e-17,315;UBERON:0006603,1.25e-17,315;UBERON:0000305,8.04e-15,7;UBERON:0004871,6.97e-13,8;UBERON:0000478,2.13e-10,24;UBERON:0002384,2.26e-09,371;UBERON:0001987,3.00e-07,4;UBERON:0004340,3.00e-07,4;UBERON:0003124,5.87e-07,7 | |||
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| |||
|short_description=p5@ADPRH | |||
}} |
Revision as of 21:01, 12 September 2013
Short description: | p5@ADPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ADPRH_5end |
Coexpression cluster: | C2675_Mast_CD14_immature_placenta_Basophils_Renal_chorionic |
Association with transcript: | 22bp_to_ENST00000485496_5end |
EntrezGene: | ADPRH |
HGNC: | 269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.72e-58 | 76 |
bone element | 4.63e-53 | 82 |
immune system | 1.16e-50 | 93 |
skeletal element | 1.97e-47 | 90 |
hematopoietic system | 3.59e-45 | 98 |
blood island | 3.59e-45 | 98 |
hemolymphoid system | 1.81e-44 | 108 |
skeletal system | 1.19e-41 | 100 |
lateral plate mesoderm | 1.44e-34 | 203 |
musculoskeletal system | 9.41e-21 | 167 |
extraembryonic membrane | 2.73e-19 | 14 |
membranous layer | 2.73e-19 | 14 |
mesoderm | 1.25e-17 | 315 |
mesoderm-derived structure | 1.25e-17 | 315 |
presumptive mesoderm | 1.25e-17 | 315 |
amnion | 8.04e-15 | 7 |
somatic layer of lateral plate mesoderm | 6.97e-13 | 8 |
extraembryonic structure | 2.13e-10 | 24 |
connective tissue | 2.26e-09 | 371 |
placenta | 3.00e-07 | 4 |
allantois | 3.00e-07 | 4 |
chorion | 5.87e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.