FFCP PHASE1:Hg19::chr5:146258225..146258230,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5521|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9305|TSSclassifier=S|UniProt=Q00005|association_with_transcript=-66bp_to_ENST00000394413,NM_004576,uc003loe.2,uc010jgm.2_5end|description=CAGE_peak_22_at_PPP2R2B_5end|id=chr5:146258225..146258230,-|ontology_enrichment_celltype=CL:0000791!5.10e-11!18;CL:0000789!5.10e-11!18;CL:0002420!5.10e-11!18;CL:0002419!5.10e-11!18;CL:0000790!5.10e-11!18;CL:0000084!1.07e-08!25;CL:0000827!1.07e-08!25;CL:0000625!2.23e-08!11;CL:0000080!2.02e-07!6;CL:0000623!9.89e-07!3;CL:0000825!9.89e-07!3|ontology_enrichment_celltype_v019=CL:0000625;8.60e-24;11!CL:0000623;5.27e-15;3!CL:0000791;1.56e-14;18!CL:0000789;1.56e-14;18!CL:0002419;1.56e-14;18!CL:0000084;1.93e-10;25|ontology_enrichment_celltype_v019_2=CL:0000625,2.45e-23,11;CL:0000623,2.80e-15,3;CL:0000825,2.80e-15,3;CL:0000791,2.93e-14,18;CL:0000789,2.93e-14,18;CL:0002420,2.93e-14,18;CL:0002419,2.93e-14,18;CL:0000790,2.93e-14,18;CL:0000084,3.02e-10,25;CL:0000827,3.02e-10,25;CL:0000838,3.61e-09,52;CL:0000542,5.54e-09,53;CL:0000051,5.54e-09,53|ontology_enrichment_development_v019=CL:0000790;1.56e-14;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.21e-29!82;UBERON:0005743!2.21e-28!86;UBERON:0001049!5.27e-26!57;UBERON:0005068!5.27e-26!57;UBERON:0006241!5.27e-26!57;UBERON:0007135!5.27e-26!57;UBERON:0000073!7.00e-26!94;UBERON:0001016!7.00e-26!94;UBERON:0000955!1.27e-25!69;UBERON:0006238!1.27e-25!69;UBERON:0002780!3.79e-24!41;UBERON:0001890!3.79e-24!41;UBERON:0006240!3.79e-24!41;UBERON:0001893!2.13e-23!34;UBERON:0003080!2.16e-23!42;UBERON:0002020!6.65e-23!34;UBERON:0003528!6.65e-23!34;UBERON:0002791!8.26e-22!33;UBERON:0002616!1.82e-21!59;UBERON:0001869!3.85e-21!32;UBERON:0007023!1.09e-20!115;UBERON:0003075!1.38e-18!86;UBERON:0007284!1.38e-18!86;UBERON:0002619!3.93e-18!22;UBERON:0001950!1.11e-17!20;UBERON:0003056!1.33e-17!61;UBERON:0000956!1.42e-17!25;UBERON:0000203!1.42e-17!25;UBERON:0002346!2.73e-17!90;UBERON:0000153!8.36e-14!129;UBERON:0007811!8.36e-14!129;UBERON:0000033!4.08e-13!123;UBERON:0004121!4.65e-11!169;UBERON:0000924!1.58e-10!173;UBERON:0006601!1.58e-10!173;UBERON:0002021!2.93e-10!5;UBERON:0002298!7.96e-07!8;UBERON:0002308!8.89e-07!9;UBERON:0000125!8.89e-07!9|ontology_enrichment_uberon_v019=UBERON:0001869;1.44e-17;32!UBERON:0001893;3.84e-17;34!UBERON:0002791;5.13e-14;32!UBERON:0003528;1.61e-13;34!UBERON:0002020;1.61e-13;34!UBERON:0001950;1.90e-12;20!UBERON:0002581;6.95e-12;1!UBERON:0001882;6.95e-12;1!UBERON:0002022;6.95e-12;1!UBERON:0001874;6.95e-12;1!UBERON:0003112;6.95e-12;1!UBERON:0011158;6.95e-12;1!UBERON:0007190;6.95e-12;1!UBERON:0003128;6.95e-12;1!UBERON:0005403;6.95e-12;1!UBERON:0001703;6.95e-12;1!UBERON:0002241;6.95e-12;1!UBERON:0000369;1.72e-11;4!UBERON:0002435;1.72e-11;4!UBERON:0000204;1.72e-11;4!UBERON:0002619;2.34e-11;22!UBERON:0002780;1.57e-10;41!UBERON:0001890;1.57e-10;41!UBERON:0000956;4.92e-10;25!UBERON:0000203;4.92e-10;25!UBERON:0000200;5.93e-08;6!UBERON:0001017;6.34e-08;75!UBERON:0000955;8.84e-08;68!UBERON:0009663;6.19e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.75e-19,32;UBERON:0001893,2.54e-18,34;UBERON:0002780,4.02e-15,41;UBERON:0001890,4.02e-15,41;UBERON:0003080,4.02e-15,41;UBERON:0006240,4.02e-15,41;UBERON:0002791,6.31e-15,32;UBERON:0003528,4.89e-14,34;UBERON:0002020,4.89e-14,34;UBERON:0001950,1.96e-12,20;UBERON:0007190,3.65e-12,1;UBERON:0001882,5.62e-12,1;UBERON:0005403,5.62e-12,1;UBERON:0003112,7.76e-12,1;UBERON:0011158,7.76e-12,1;UBERON:0003128,7.76e-12,1;UBERON:0001703,7.76e-12,1;UBERON:0002241,7.76e-12,1;UBERON:0004761,7.76e-12,1;UBERON:0009617,7.76e-12,1;UBERON:0002022,8.64e-12,1;UBERON:0001874,9.61e-12,1;UBERON:0002581,1.07e-11,1;UBERON:0000073,1.46e-11,53;UBERON:0002616,1.46e-11,53;UBERON:0000369,1.82e-11,4;UBERON:0002435,1.82e-11,4;UBERON:0000204,1.82e-11,4;UBERON:0010082,1.82e-11,4;UBERON:0001017,2.40e-11,81;UBERON:0002619,2.40e-11,22;UBERON:0000955,4.55e-11,68;UBERON:0006238,4.55e-11,68;UBERON:0001049,6.65e-11,56;UBERON:0005068,6.65e-11,56;UBERON:0006241,6.65e-11,56;UBERON:0007135,6.65e-11,56;UBERON:0001016,4.24e-10,89;UBERON:0000956,5.03e-10,25;UBERON:0000203,5.03e-10,25;UBERON:0003056,5.99e-10,61;UBERON:0007023,1.31e-09,114;UBERON:0000200,5.55e-08,6;UBERON:0003075,3.42e-07,82;UBERON:0007284,3.42e-07,82;UBERON:0009663,6.39e-07,7;UBERON:0002346,8.10e-07,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.541607727530031,0,0,0,0,0,0,0,0,0,0.383220493601921,0.68725489096526,0,0.318565414324097,0,0,0.752875595388864,1.02389288923535,0,1.18388626022008,0,1.20964045934839,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.19646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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9305 | |||
|TSSclassifier=S | |||
|UniProt=Q00005 | |||
|association_with_transcript=-66bp_to_ENST00000394413,NM_004576,uc003loe.2,uc010jgm.2_5end | |||
|description=CAGE_peak_22_at_PPP2R2B_5end | |||
|id=chr5:146258225..146258230,- | |||
|ontology_enrichment_celltype=CL:0000791!5.10e-11!18;CL:0000789!5.10e-11!18;CL:0002420!5.10e-11!18;CL:0002419!5.10e-11!18;CL:0000790!5.10e-11!18;CL:0000084!1.07e-08!25;CL:0000827!1.07e-08!25;CL:0000625!2.23e-08!11;CL:0000080!2.02e-07!6;CL:0000623!9.89e-07!3;CL:0000825!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.60e-24;11!CL:0000623;5.27e-15;3!CL:0000791;1.56e-14;18!CL:0000789;1.56e-14;18!CL:0002419;1.56e-14;18!CL:0000084;1.93e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.45e-23,11;CL:0000623,2.80e-15,3;CL:0000825,2.80e-15,3;CL:0000791,2.93e-14,18;CL:0000789,2.93e-14,18;CL:0002420,2.93e-14,18;CL:0002419,2.93e-14,18;CL:0000790,2.93e-14,18;CL:0000084,3.02e-10,25;CL:0000827,3.02e-10,25;CL:0000838,3.61e-09,52;CL:0000542,5.54e-09,53;CL:0000051,5.54e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.56e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.21e-29!82;UBERON:0005743!2.21e-28!86;UBERON:0001049!5.27e-26!57;UBERON:0005068!5.27e-26!57;UBERON:0006241!5.27e-26!57;UBERON:0007135!5.27e-26!57;UBERON:0000073!7.00e-26!94;UBERON:0001016!7.00e-26!94;UBERON:0000955!1.27e-25!69;UBERON:0006238!1.27e-25!69;UBERON:0002780!3.79e-24!41;UBERON:0001890!3.79e-24!41;UBERON:0006240!3.79e-24!41;UBERON:0001893!2.13e-23!34;UBERON:0003080!2.16e-23!42;UBERON:0002020!6.65e-23!34;UBERON:0003528!6.65e-23!34;UBERON:0002791!8.26e-22!33;UBERON:0002616!1.82e-21!59;UBERON:0001869!3.85e-21!32;UBERON:0007023!1.09e-20!115;UBERON:0003075!1.38e-18!86;UBERON:0007284!1.38e-18!86;UBERON:0002619!3.93e-18!22;UBERON:0001950!1.11e-17!20;UBERON:0003056!1.33e-17!61;UBERON:0000956!1.42e-17!25;UBERON:0000203!1.42e-17!25;UBERON:0002346!2.73e-17!90;UBERON:0000153!8.36e-14!129;UBERON:0007811!8.36e-14!129;UBERON:0000033!4.08e-13!123;UBERON:0004121!4.65e-11!169;UBERON:0000924!1.58e-10!173;UBERON:0006601!1.58e-10!173;UBERON:0002021!2.93e-10!5;UBERON:0002298!7.96e-07!8;UBERON:0002308!8.89e-07!9;UBERON:0000125!8.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.44e-17;32!UBERON:0001893;3.84e-17;34!UBERON:0002791;5.13e-14;32!UBERON:0003528;1.61e-13;34!UBERON:0002020;1.61e-13;34!UBERON:0001950;1.90e-12;20!UBERON:0002581;6.95e-12;1!UBERON:0001882;6.95e-12;1!UBERON:0002022;6.95e-12;1!UBERON:0001874;6.95e-12;1!UBERON:0003112;6.95e-12;1!UBERON:0011158;6.95e-12;1!UBERON:0007190;6.95e-12;1!UBERON:0003128;6.95e-12;1!UBERON:0005403;6.95e-12;1!UBERON:0001703;6.95e-12;1!UBERON:0002241;6.95e-12;1!UBERON:0000369;1.72e-11;4!UBERON:0002435;1.72e-11;4!UBERON:0000204;1.72e-11;4!UBERON:0002619;2.34e-11;22!UBERON:0002780;1.57e-10;41!UBERON:0001890;1.57e-10;41!UBERON:0000956;4.92e-10;25!UBERON:0000203;4.92e-10;25!UBERON:0000200;5.93e-08;6!UBERON:0001017;6.34e-08;75!UBERON:0000955;8.84e-08;68!UBERON:0009663;6.19e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.75e-19,32;UBERON:0001893,2.54e-18,34;UBERON:0002780,4.02e-15,41;UBERON:0001890,4.02e-15,41;UBERON:0003080,4.02e-15,41;UBERON:0006240,4.02e-15,41;UBERON:0002791,6.31e-15,32;UBERON:0003528,4.89e-14,34;UBERON:0002020,4.89e-14,34;UBERON:0001950,1.96e-12,20;UBERON:0007190,3.65e-12,1;UBERON:0001882,5.62e-12,1;UBERON:0005403,5.62e-12,1;UBERON:0003112,7.76e-12,1;UBERON:0011158,7.76e-12,1;UBERON:0003128,7.76e-12,1;UBERON:0001703,7.76e-12,1;UBERON:0002241,7.76e-12,1;UBERON:0004761,7.76e-12,1;UBERON:0009617,7.76e-12,1;UBERON:0002022,8.64e-12,1;UBERON:0001874,9.61e-12,1;UBERON:0002581,1.07e-11,1;UBERON:0000073,1.46e-11,53;UBERON:0002616,1.46e-11,53;UBERON:0000369,1.82e-11,4;UBERON:0002435,1.82e-11,4;UBERON:0000204,1.82e-11,4;UBERON:0010082,1.82e-11,4;UBERON:0001017,2.40e-11,81;UBERON:0002619,2.40e-11,22;UBERON:0000955,4.55e-11,68;UBERON:0006238,4.55e-11,68;UBERON:0001049,6.65e-11,56;UBERON:0005068,6.65e-11,56;UBERON:0006241,6.65e-11,56;UBERON:0007135,6.65e-11,56;UBERON:0001016,4.24e-10,89;UBERON:0000956,5.03e-10,25;UBERON:0000203,5.03e-10,25;UBERON:0003056,5.99e-10,61;UBERON:0007023,1.31e-09,114;UBERON:0000200,5.55e-08,6;UBERON:0003075,3.42e-07,82;UBERON:0007284,3.42e-07,82;UBERON:0009663,6.39e-07,7;UBERON:0002346,8.10e-07,86 | |||
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|short_description=p22@PPP2R2B | |||
}} |
Revision as of 13:50, 13 September 2013
Short description: | p22@PPP2R2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_PPP2R2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000394413, NM_004576, uc003loe.2, uc010jgm.2_5end |
EntrezGene: | PPP2R2B |
HGNC: | 9305 |
UniProt: | Q00005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.45e-23 | 11 |
natural killer cell | 2.80e-15 | 3 |
pro-NK cell | 2.80e-15 | 3 |
mature alpha-beta T cell | 2.93e-14 | 18 |
alpha-beta T cell | 2.93e-14 | 18 |
immature T cell | 2.93e-14 | 18 |
mature T cell | 2.93e-14 | 18 |
immature alpha-beta T cell | 2.93e-14 | 18 |
T cell | 3.02e-10 | 25 |
pro-T cell | 3.02e-10 | 25 |
lymphoid lineage restricted progenitor cell | 3.61e-09 | 52 |
lymphocyte | 5.54e-09 | 53 |
common lymphoid progenitor | 5.54e-09 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.