FFCP PHASE1:Hg19::chr10:120789223..120789231,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=340719 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23044 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WY41 | |||
|association_with_transcript=0bp_to_ENST00000425699,NM_199461,uc009xzf.1_5end | |||
|description=CAGE_peak_1_at_NANOS1_5end | |||
|id=chr10:120789223..120789231,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.78e-13!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.56e-14,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.30e-15!106;DOID:0050687!2.87e-15!143;DOID:162!7.00e-13!235;DOID:14566!1.60e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.78e-15,106;DOID:0050687,8.74e-14,143;DOID:162,2.62e-09,235;DOID:14566,2.59e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0003075!8.20e-13!86;UBERON:0007284!8.20e-13!86;UBERON:0004121!5.79e-12!169;UBERON:0005743!1.09e-11!86;UBERON:0000073!1.83e-11!94;UBERON:0001016!1.83e-11!94;UBERON:0002346!1.96e-11!90;UBERON:0000924!4.38e-11!173;UBERON:0006601!4.38e-11!173;UBERON:0000064!1.14e-10!219;UBERON:0000033!1.61e-10!123;UBERON:0000153!2.67e-10!129;UBERON:0007811!2.67e-10!129;UBERON:0001017!4.41e-10!82;UBERON:0000955!1.13e-08!69;UBERON:0006238!1.13e-08!69;UBERON:0001049!1.59e-08!57;UBERON:0005068!1.59e-08!57;UBERON:0006241!1.59e-08!57;UBERON:0007135!1.59e-08!57;UBERON:0003056!1.81e-08!61;UBERON:0002616!6.92e-08!59;UBERON:0001048!1.31e-07!168;UBERON:0000481!1.46e-07!347;UBERON:0000062!6.41e-07!511;UBERON:0000475!7.35e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,7.87e-14,82;UBERON:0007284,7.87e-14,82;UBERON:0010371,2.14e-13,104;UBERON:0002346,5.20e-12,86;UBERON:0004121,3.64e-11,171;UBERON:0000924,3.64e-11,171;UBERON:0006601,3.64e-11,171;UBERON:0001017,5.66e-10,81;UBERON:0001016,1.42e-09,89;UBERON:0010314,2.14e-09,132;UBERON:0003056,1.29e-08,61;UBERON:0011216,1.36e-08,223;UBERON:0001049,1.37e-08,56;UBERON:0005068,1.37e-08,56;UBERON:0006241,1.37e-08,56;UBERON:0007135,1.37e-08,56;UBERON:0000955,2.34e-08,68;UBERON:0006238,2.34e-08,68;UBERON:0000073,1.95e-07,53;UBERON:0002616,1.95e-07,53;UBERON:0001048,2.84e-07,160 | |||
|phase1_expression=0.54503513781167,2.99740733447376,1.12763523276777,3.00219895059391,4.91657203870017,0,5.06599756336621,3.79031924056099,18.0218083457889,0.982935746006035,8.37361401566913,0.436882744260345,0.527533956456907,1.11389717664042,2.31978163009541,0,0.602694528023977,0.730310090387373,0,8.74159512345194,18.9720642857155,34.1665646411116,2.28988789704845,5.74872585306114,1.88313959392204,0,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,1.83884244895785,3.31326510656075,0,4.41563043307719,0.426507697462265,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0.512321413058201,0.47296445977717,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.797854630486527,0,0,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0.790152254325231,0.590129310341499,0.393010762749165,0.411202997999018,0,0.651844533267181,0.473447805734733,0,0.334231370655521,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0.829050053357545,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0.534880391567015,1.01377082717959,2.43806866313962,8.04841031644363,7.03244090139417,1.44575660953827,5.51471701699479,7.82171202388448,0,0.973269740605272,4.44313640671119,1.33037638477538,4.74307842742881,1.83370705696798,1.09288586487763,0.741568885568859,0.324547393654683,0.348259474598534,1.19662164466979,2.62339686735876,0.571994910780128,2.60020250930695,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,2.18047026071267,0.496971951695318,1.64619665163954,0.264818361626438,1.14734648299525,0.709336764396714,5.04609840128076,0,4.68668341992604,0.311211035399766,1.75123873690594,0.653847612453835,3.48122083583342,4.60940739583999,0.468642863667593,1.5608003841516,0.570471821544449,1.19558944441441,0.23486899728753,0.161872944368132,0.140450806702248,1.83738754129404,0.122834317311768,13.9489804587283,0,1.97813543422845,1.82032272387605,0,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,1.20190447125277,2.60894021268048,0,0.427114777637135,0.635795703478686,0,0.309157587715317,0,0.37223371266318,0.506328996723799,0,0,0.644349290496095,0.484938170456436,0,0.201504196455281,0.169560592310488,3.67195621010264,3.00020732649918,3.44165514466805,1.46368447355514,2.65059536642971,2.5562667431294,3.83545903556871,2.52320850875628,2.91981887260664,0,0.643240938192885,0,4.64367928031979,10.1063127433742,2.12952240071719,2.19160097101532,2.89213235860178,3.30881918197182,2.39667388501647,3.08451804844426,1.75280700608214,1.76599318612811,0.769494313892781,0,4.20725321410337,4.5273141246454,2.94017422771084,1.26755034821831,0,0.590789906681404,4.41463099414651,1.35287282397425,2.40194934417936,1.20725313949488,1.1240175325762,0.703702806881416,2.22212268380471,4.23550796903422,4.15973914111831,2.88662684050547,2.66639931442677,2.11335649624479,0.288732895522148,0,0.190254152234598,4.74122638775565,1.71697232418975,0.738651018262192,8.65815781015179,2.22946743433092,1.87467667973554,0,0.567100388969546,0.447792613514241,0.581267877027924,1.91691339582606,0,0,2.07328115540772,1.00883967391873,2.5248486685276,0.825472625798197,0,1.17217447210047,3.4214489204541,3.59896224461632,1.8020583470635,2.5724378936752,0.784917590417525,2.61576041299968,0.2933531432838,0.775630294546667,7.15312891703765,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,3.14551586047925,0.542621605391443,0,0,2.48774364119782,0,5.72734816413214,1.74306691720059,8.99756920638513,1.2162378064119,0,0,1.4377491329495,3.44585807502342,0,0.579125226670317,0,0.358121926479791,3.25046917581229,0.591092280605782,0.431255149719035,1.15508732651774,0,1.30139853857622,3.09315525111078,0.502548796003046,3.82763250991898,0,0,0,1.59498939234882,1.00034104211935,10.0368058768902,3.74347550755453,0.713715955188647,1.41932173530541,4.09994952474496,2.40756879782175,4.5481500811197,17.5904221197258,0,0.368738337083406,0.260650843404249,0.391602314925481,2.40200396667599,0,0,0.320182673410333,5.45629628603267,3.32870879020994,4.23346410661552,0.248107807818777,0.153461973288062,1.12264037773229,0.896974044789907,0.511707249066704,0.482561763430822,2.96836132889982,0,1.06537035187876,0,0,0,3.74664293734029,2.6065841139427,3.40699659062816,0.574072240823034,0.364182336013434,0.524497659837696,0.451199612907412,0.770153371044148,3.92174884588428,0,1.89992932007176,0,0.170093705276516,0.431831832204279,1.54227252690289,1.35473218771926,4.51520796469368,2.03901018436031,2.49322802678617,2.23874754722178,0.657779629937804,1.5686127061494,49.7513242725795,9.51242472529147,4.88067591996455,5.25509159403384,1.19040304263846,0.165018999841176,1.14853107599234,0,1.6068392984416,0.290012154876366,0.462145851343933,0.614014698904518,0.275673144969061,0.214840489736547,0.290033387828457,0.255679882248303,2.31483292681517,4.62797763010739,13.8376848502876,3.70076866234294,13.9597737580659,0.464845549297286,0.62962469366128,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,2.60510858551767,0.632758849437452,1.33441135746677,0.511795582622668,3.42351190427136,0,0.78494864019923,0.719489830333259,1.09814811894422,0.706874414074119,0.808729926293264,0,0.421258456238981,2.92580243453754,0.243713489631284,0,0.272999822815972,0.707027159768564,0,0,0.66343897524122,0.438450885253763,1.15755106853338,1.31178950409327,1.62328301570163,0.30982349809975,0.281695602532241,0,0.687743287091848,1.78335525740625,0.354761064070598,4.43326034125095,1.64647446479951,1.51789269506286,10.8479763275945,0.288666338176536,0,4.3556393944529,5.93105944893709,1.29151611801369,0,1.33029046061003,0.918893600827838,0,0,0.569647187174163,0,0.411362273086194,1.29694662238543,0,0,1.28188885352968,17.3246373947405,4.16568367167754,0.557409525377156,0,3.13024110733022,2.07254154547469,1.1974762285969,0.5745161103971,0.211673582723883,6.49243880549111,0.280797178113459,0.456469358066384,0.47003968731907,5.01268954180134,0.169291777801603,0.481764225311099,1.00899853595524,0.425846237690326,1.71752672377882,2.45792611446766,0.671028323677248,1.50164227540718,0.781552381608161,1.39203086947621,0,1.35227839237992,0.33307196799782,7.04935025439248,5.23993513143015,6.15334352941955,3.27673408723686,6.79804644092618,1.70481688083848,3.81991175580304,2.07875276582847,4.91457123358771,2.98244294329889,6.18945432206256,5.34281784109948,0.16480387422676,1.47787785689595,4.18420775327246,0,5.03865495708552,4.60209071259697,1.35393286007176,0.933118762985422,18.3331436340547,1.61119057208048,3.06943422136123,2.66337195219721,2.3948309234694,0,1.93866549219044,1.66982576691332,1.99613798001194,2.3438498497671,26.0630799988663,5.07499702804355,3.41380344856499,4.83081935556256,0.945550727071745,7.23961083807076,4.95727842751532,4.34062487333231,4.42870692906919,5.66803261539417,0,5.41838373663001,5.31985714116385,2.19385397153973,0,3.76444109552229,4.00141344219745,2.16489906109302,2.3056390438806,3.94933635402997,0.977826347298073,1.5950057986596,7.32780747214898,0.533034776018635,0,1.2558420511602,1.66211681900156,0.902382642468723,0.784250137270958,0.503464760927528,0.37950746544837,0.794682894901893,0.210998064528027,1.95879369790977,2.12029607150911,1.51472047819464,0,1.23840590304675,1.83309043480088,4.44781693020933,1.97702302314405,1.35748534357092,3.57226004797588,1.60515529459758,1.63985112007737,0.729819156862664,8.80490785194404,0.728341138602278,1.18375320854817,2.41981432097328,3.0607276163049,1.0741718536843,4.81034942126376,3.94015127309539,1.99396161812156,1.98595173525299,0.941798755221676,3.58417289318877,4.26914319044689,0,2.08271686002157,1.7638631534588,2.87295381715328,3.4945333648406,0.51595809741485,3.28971526382889,1.60796497589608,2.6276946257027,1.55182426381471,0.882561266915003,12.2029600021488,0.411125773940253,0.596143835108969,1.26621591911757,1.95551382734803,4.00794101257669,0.213452994739353,6.5937171162103,1.15272333723285,3.09248809647972,3.43189995723929,2.44893156579854,1.24252535565433,8.24929121158784,0.543616824294456,0.209205692624666,2.65195365854437,0.577901179803038,3.00210144354895,4.51787750343577,0,3.0083580899397,0.788662062837943,2.51354161145029,5.04152932825704,3.58936512288407,5.79069101447074,6.86761677018513,14.059801818838,1.74677028465488,1.44119953416961,10.4846354574708,1.10296455230113,0.741742725430498,0.808842526250219,14.4688397826681,0,1.59045937961861,4.76711921390515,2.73280352390533,3.71356478812531,5.40072439437941,0.449947783103001,0.77380195455795,1.09349201984444,24.8221668823457,1.33969702408637,1.73100140845494,1.26720403823288,1.79287339332845,11.3229966418473,2.1440859791201,7.94510364438518,1.017074150619,0.542999601753713,0,0,1.19730191562487,1.06720276974141,0.170388021785422,4.75910784384528,0,1.32506888912221,5.04203529810047,4.76037366273684,1.36869470307464,1.40963004463334,1.38823636338003,0,0.828478110694391,0.496166021811951,4.34745590175477,0.243585196761792,3.83004754662109,45.1534776796663,17.0469127935436,22.3632271037327,14.4263957512314,0.942324577501406,0,2.19647276823534,2.1282458220105,3.44045517414043,4.43716206147409,3.72578417648301,123.68367963299,2.74956897516635,7.58245587708239,1.42732666772484,3.52898729547258,2.81000943484129,1.30428925749743,0.149254802886874,0,0,0.568209015825267,1.50940741051545,0.889811221596536,1.37304041038154,0.302461847526478,0,0.443565449968902,0.63718706865481,0.899606224327209,0.931577741257556,0,0.265841714557995,20.3480574106576,1.35231848097497,3.80805212168795,0,0.363697318405119,0.537052785212442,0.928067519756987,13.5352602157529,0.400027764663154,0.343395705182793,0.336749488765919,1.26184898228651,0.57785949122191,2.57329909649911,2.08795433572169,0.680117776536817,2.31522474323834,0.97894681802587,1.61179956973339,1.54400723580486,2.19284049578707,6.71418754594348,1.92914038270915,4.22356101632682,0.512483037175893,6.90860683462397,9.41965864149885,3.73297777609673,0.779441235357554,1.59437808376036,0.327130788511688,6.22458712808184,0,6.55067582411744,0.59996218756479,2.45390978296524,0.172214979660816,1.70254786070051,2.39337735327393,1.39879507719444,0.622077260032973,10.4873384468994,0.215649622793364,0.471797825567689,6.22494937694479,0.509197589862076,0.212574920101683,0.619678821295011,9.49696360554514,0.954013051960256,5.52032215008773,1.60114149657094,6.34816698643231,1.2249819094128,1.66995985250795,0,3.99084647642878,0.615349092722265,2.26864526599546,1.65977405914123,2.09918339321406,2.85538840518309,11.1888399091169,2.00548529691159,7.33714394086716,77.2866706545763,1.1441462864015,0,1.98916222116275,0.300841313397029,1.21023041222112,0,2.09525355585138,16.2134198334996,10.7934942938443,1.55336444622308,3.90539049306924,3.72036233702131,2.09272173639893,4.37579847214576,0.548257766857182,3.96968942711435,0.175871244359621,2.29972369751271,0.535701835878287,0.336283722218824,1.21393120847326,0.91064876540519,5.85435643073416,0.921871900446234,4.11571222649804,0.951576261675644,1.51277379194553,4.13678443093889,1.4460082245969,2.74725824976799,3.77077415798405,5.0448989396482,0,0.431855182437243,1.43325506366115,7.29060750601895,10.2708847626272,0.697448552208751,2.78173235684127,0.801711364730253,4.14432328326074,4.26796192734875,5.53007729451273,0,0.118332000730565,0.255640214277473,2.11693525095465,5.0403511079691,2.79185747097888,0.955538938977433,5.59277158988962,0,2.19452264968085,1.29485767437579,8.5210129690685,3.4794432940146,2.4285549652957,2.10545517115895,3.38216317774326,7.61088580976439,2.823652050974,4.94732325354431,7.24621649120033,0.385870790539723,0.874238242015829,1.88126918544609,2.69663153929296,7.3059729601504,4.12247780941385,5.94092800654172,10.566393189585,0.849635573439084,0,0.257831551894309,0.199882311849858,1.78553938605658,3.17605384544123,1.7653100671617,3.65168194123259,0.458729283404541,1.14671666521161,9.15075060720471,1.97175321553653,0.872701380680755,0.5290268405154,1.85997509083376,2.77305377178851,0.865253124247578,3.02799419604189,7.75785560942238,1.90047751517155,6.42529627374485,10.955913615888,3.40011128278926,1.50424523575425,2.65225443763838,2.14371304124943,5.80418607621146,2.48239190068549,1.70587185520785,5.71354635512977,0.322944549180031,0.931120714437869,7.84923038064294,4.39165392119338,5.45716410187192,0.217716747896961,0.342233301085281,0.26940821205835,0.860666464712116,0.99798106963804,1.87227517805241,1.28072815053259,0,3.32353247794371,0,1.4668973301944,5.69654649642034,7.98908129022615,2.01273793591026,0 | |||
|short_description=p1@NANOS1 | |||
}} |
Revision as of 05:14, 11 January 2014
Short description: | p1@NANOS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NANOS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000425699, NM_199461, uc009xzf.1_5end |
EntrezGene: | NANOS1 |
HGNC: | 23044 |
UniProt: | Q8WY41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.56e-14 | 253 |
Ontology term | p-value | n |
---|---|---|
neural plate | 7.87e-14 | 82 |
presumptive neural plate | 7.87e-14 | 82 |
ecto-epithelium | 2.14e-13 | 104 |
neurectoderm | 5.20e-12 | 86 |
ectoderm-derived structure | 3.64e-11 | 171 |
ectoderm | 3.64e-11 | 171 |
presumptive ectoderm | 3.64e-11 | 171 |
central nervous system | 5.66e-10 | 81 |
nervous system | 1.42e-09 | 89 |
structure with developmental contribution from neural crest | 2.14e-09 | 132 |
pre-chordal neural plate | 1.29e-08 | 61 |
organ system subdivision | 1.36e-08 | 223 |
neural tube | 1.37e-08 | 56 |
neural rod | 1.37e-08 | 56 |
future spinal cord | 1.37e-08 | 56 |
neural keel | 1.37e-08 | 56 |
brain | 2.34e-08 | 68 |
future brain | 2.34e-08 | 68 |
regional part of nervous system | 1.95e-07 | 53 |
regional part of brain | 1.95e-07 | 53 |
primordium | 2.84e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.78e-15 | 106 |
cell type cancer | 8.74e-14 | 143 |
cancer | 2.62e-09 | 235 |
disease of cellular proliferation | 2.59e-08 | 239 |