FFCP PHASE1:Hg19::chr12:47610202..47610253,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100233209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000500365,ENST00000547600,ENST00000547851,ENST00000552975,ENST00000552990,NR_026544,uc001rpp.2_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_LOC100233209_5end | |||
|id=chr12:47610202..47610253,- | |||
|ontology_enrichment_celltype=CL:0000037!3.08e-69!172;CL:0000566!3.08e-69!172;CL:0000738!1.04e-66!140;CL:0002032!3.09e-64!165;CL:0000837!3.09e-64!165;CL:0000988!8.52e-62!182;CL:0002087!5.81e-60!119;CL:0002031!7.83e-57!124;CL:0000542!3.34e-36!53;CL:0000051!3.34e-36!53;CL:0000838!1.40e-35!52;CL:0000763!9.18e-28!112;CL:0000049!9.18e-28!112;CL:0000766!6.17e-25!76;CL:0002009!1.19e-21!65;CL:0002194!1.94e-21!63;CL:0000576!1.94e-21!63;CL:0000040!1.94e-21!63;CL:0000559!1.94e-21!63;CL:0000839!2.51e-21!70;CL:0000557!1.17e-20!71;CL:0000945!7.80e-18!24;CL:0000826!7.80e-18!24;CL:0002057!6.14e-17!42;CL:0000084!2.03e-16!25;CL:0000827!2.03e-16!25;CL:0000791!1.17e-15!18;CL:0000789!1.17e-15!18;CL:0002420!1.17e-15!18;CL:0002419!1.17e-15!18;CL:0000790!1.17e-15!18;CL:0000860!9.16e-15!45;CL:0000236!3.36e-12!14;CL:0000625!1.86e-10!11;CL:0000134!2.44e-08!358;CL:0002320!1.95e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.18e-23;53!CL:0000945;2.42e-19;24!CL:0002087;3.03e-18;104!CL:0000084;5.03e-17;25!CL:0000791;5.46e-17;18!CL:0000789;5.46e-17;18!CL:0002419;5.46e-17;18!CL:0000738;7.95e-15;136!CL:0000576;1.66e-14;48!CL:0000473;3.44e-13;39!CL:0000234;3.44e-13;39!CL:0000236;9.91e-13;13!CL:0000860;1.95e-12;33!CL:0002057;1.95e-12;33!CL:0000766;1.27e-11;69!CL:0000625;2.72e-11;11!CL:0000988;3.81e-11;177!CL:0000763;1.95e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.62e-71,136;CL:0000037,1.28e-69,168;CL:0002087,5.17e-69,115;CL:0002032,2.78e-64,161;CL:0000837,2.78e-64,161;CL:0000988,3.61e-63,177;CL:0002031,1.18e-61,120;CL:0000542,1.40e-38,53;CL:0000051,1.40e-38,53;CL:0000838,6.74e-38,52;CL:0000766,4.13e-28,72;CL:0002194,1.20e-26,59;CL:0000576,1.20e-26,59;CL:0000040,1.20e-26,59;CL:0000559,1.20e-26,59;CL:0000763,2.92e-26,108;CL:0000049,2.92e-26,108;CL:0002009,5.19e-26,61;CL:0000839,4.43e-24,66;CL:0000557,1.24e-22,67;CL:0000473,9.11e-22,48;CL:0000234,9.11e-22,48;CL:0000945,2.31e-19,24;CL:0000826,2.31e-19,24;CL:0000860,2.21e-18,42;CL:0002057,2.21e-18,42;CL:0000791,5.55e-17,18;CL:0000789,5.55e-17,18;CL:0002420,5.55e-17,18;CL:0002419,5.55e-17,18;CL:0000790,5.55e-17,18;CL:0000084,5.56e-17,25;CL:0000827,5.56e-17,25;CL:0000236,3.38e-13,14;CL:0000625,2.72e-11,11;CL:0000134,4.93e-09,354;CL:0002320,3.60e-08,361 | |||
|ontology_enrichment_development_v019=CL:0000051;9.18e-23;53!CL:0000790;5.46e-17;18!CL:0002057;1.23e-13;42!CL:0000049;1.83e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!4.72e-11!51;DOID:0060083!4.72e-11!51;DOID:1240!1.96e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.62e-09,51;DOID:0060083,7.62e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.95e-32!115;UBERON:0002390!9.55e-26!102;UBERON:0003061!9.55e-26!102;UBERON:0002193!1.04e-22!112;UBERON:0002371!1.10e-17!80;UBERON:0001474!7.00e-15!86;UBERON:0002405!2.59e-12!115;UBERON:0001049!2.25e-11!57;UBERON:0005068!2.25e-11!57;UBERON:0006241!2.25e-11!57;UBERON:0007135!2.25e-11!57;UBERON:0004765!7.08e-11!101;UBERON:0001434!7.08e-11!101;UBERON:0003080!3.75e-09!42;UBERON:0002780!7.36e-09!41;UBERON:0001890!7.36e-09!41;UBERON:0006240!7.36e-09!41;UBERON:0002616!2.64e-08!59;UBERON:0002020!1.02e-07!34;UBERON:0003528!1.02e-07!34;UBERON:0001893!1.13e-07!34;UBERON:0002791!1.86e-07!33;UBERON:0002384!4.31e-07!375;UBERON:0000955!6.94e-07!69;UBERON:0006238!6.94e-07!69;UBERON:0001869!7.55e-07!32;UBERON:0001017!7.70e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.19e-08;114!UBERON:0000178;2.82e-07;15!UBERON:0000179;2.82e-07;15!UBERON:0000463;2.82e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-31,114;UBERON:0002390,1.03e-28,98;UBERON:0003061,1.03e-28,98;UBERON:0002193,1.25e-25,108;UBERON:0002405,1.16e-19,93;UBERON:0002371,1.38e-19,76;UBERON:0001474,1.17e-16,82;UBERON:0004765,1.89e-13,90;UBERON:0001049,7.36e-11,56;UBERON:0005068,7.36e-11,56;UBERON:0006241,7.36e-11,56;UBERON:0007135,7.36e-11,56;UBERON:0001434,8.47e-11,100;UBERON:0000073,1.05e-09,53;UBERON:0002616,1.05e-09,53;UBERON:0002780,2.70e-08,41;UBERON:0001890,2.70e-08,41;UBERON:0003080,2.70e-08,41;UBERON:0006240,2.70e-08,41;UBERON:0002384,1.58e-07,371;UBERON:0003528,1.68e-07,34;UBERON:0002020,1.68e-07,34;UBERON:0001893,1.86e-07,34;UBERON:0000178,2.85e-07,15;UBERON:0000179,2.85e-07,15;UBERON:0000463,2.85e-07,15;UBERON:0002791,8.03e-07,32 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.4390383887911,25.8616856767329,29.201699867375,34.2226920858546,66.0186564727206,22.448337880831,0,0,0,63.9879076793291,20.1880310132139,6.16560922603179,13.2958898047651,15.0408335602606,19.5309783644267,34.7068985071883,28.1787489436512,42.4999686596408,7.26991193897824,8.31327076115381,6.0646015296954,6.50801303335917,4.93401465626191,4.33588919253145,10.6446185159196,14.8573209786878,13.0065226438722,7.23965929546899,3.22742341791913,5.41705946377367,7.71793592124679,7.36846605156184,10.1125568000288,4.28517449319264,9.30694178520671,6.39337125799041,11.5447955065351,10.3721101963249,10.6556187633174,5.22376629531451,5.10646702222026,3.73693349397345,6.28121663141858,8.34372669472322,9.1219314776149,6.65939452896706,6.2607198117886,5.37986058649504,14.365359469212,13.8192794977278,12.3698600849942,5.27944566388527,3.30389164251314,3.37523732063868,38.4767204050686,30.6331682886599,19.5450644528158,188.315981573615,152.372672542135,161.001174949303,183.920725926165,170.168294490305,146.561872188393,170.549577178494,179.362105852648,64.8902784784771,66.945039588287,50.8423393406554,13.2171328579026,15.694239763483,10.271979306228,47.2103448273199,55.4145175476322,64.9700736838449,21.7342444007882,104.946969856016,119.782294850888,42.8618802497405,82.8893799225691,126.385934306705,125.166650439746,90.9900982250452,27.6677250607458,23.0205045180984,45.2204237660109,45.597752934665,70.1323467478827,121.446695229727,104.073382126898,64.8120247590856,47.2499959048851,120.331234991003,137.107350747569,66.2911593091097,137.301693573686,138.680775671417,185.338148667433,126.934825382562,119.283521595918,128.678648348916,125.255166331285,165.867855378051,68.546292696409,55.6275607229695,50.8333657628624,0,0,0,0,0,0,0,0,0,0,0.527008714158756,4.38779902917337,0,0,2.59637914923747,2.08955684759121,3.98873881556595,82.0407747610376,125.838880371628,100.664982860312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,23.2668158488995,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,5.73902029239046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,38.409852949634,2.34004265139238,34.9283231378511,0,0.16798212819886,0,0,0,0,0.492663237895943,0,2.07328115540772,0.720599767084807,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7572317410619,40.6828244060022,23.1917333431335,0,0,0,0,0,0,42.4802695735468,84.3291653664248,70.9414721287812,53.1340170198158,0.254094624222463,0,0,1.67516265334349,0,10.4860983352606,17.9496875522415,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.4926929894715,37.3185567416207,37.9950105780262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,1.8300481571743,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,8.75537347224046,0,0,0,0,48.2075228770561,47.4075068428273,45.0021277867588,61.4637980681096,62.5270655091015,40.2053452939485,41.0423892300967,41.2425091673021,0,0,0,29.9143111952407,35.345957179229,20.2042835109496,0.318852545457645,13.5713972574315,2.48956981172077,0,4.54470716384378,0.280797178113459,53.6351495728002,1.88015874927628,2.50634477090067,0,26.175856241903,22.1979677910152,9.36861722918718,23.0148580986362,38.4050955385572,34.8934728312169,45.2161174039272,40.8361119390264,0,1.23087398947712,0,0.33307196799782,0,0,4.9812780952444,0,2.11742430127209,0,0.23874448473769,1.18785872333055,0,5.96488588659779,13.5042639754092,0,0,0,3.98495976502139,46.4156978092328,0,0,4.80030741298171,0,0,0,0,3.84709281984041,35.922463852041,0,6.78532922266653,6.02992638052033,1.99613798001194,0,0,5.79999660347835,0,0,0.236387681767936,0,0,0,3.54296554325536,10.8536794762867,1.52581736317083,1.3269511191747,2.36438095162838,2.19385397153973,0,0,3.84751292518985,0,0,0,0,0,0.274792780205587,3.19820865611181,70.5133757550582,8.31995358893631,0.332423363800313,0.676786981851542,0.392125068635479,1.1747511088309,0.948768663620925,3.65554131654871,0,0,0,0,3.98104772431402,4.5113357896703,9.16545217400438,0,0,0,11.053785808831,4.01288823649394,11.0104289490909,22.4419390735269,0,0,1.57833761139756,6.04953580243319,0.30607276163049,19.1455336274319,0,0,0,0,0,0,0,0.138674673013139,0,0,0,3.4945333648406,0,0,0,0,4.46149475846729,0,0.90392296312213,0,2.98071917554485,4.43175571691151,0,0.0801588202515337,1.92107695265417,0,0,0,0,0,0,0,0,0,0.305994652908965,0,3.60252173225874,29.8453725984545,0,0,10.2526068168933,1.95497680890578,0.458320848023367,2.15361907373044,0.998395002494955,1.71690419254628,1.78537165953498,0.806201669840715,0,0,0,0,0,0,27.095466261051,6.36183751847443,12.530713362265,0,0,0,2.0247650239635,0.77380195455795,4.55621674935185,0,2.28536551167675,0.996637174564964,0,0,0,7.86164859010704,5.95882773328889,0,0,0,0,0,5.58229141095505,0,0.113312091520126,1.75862680413699,0,4.39562051629272,12.6943297672982,0.342173675768659,0.704815022316672,8.54299300541557,2.98688179689365,14.0841278818046,34.7316215268366,0,115.215798068328,0,0,0.7520696820681,0,0,0,0,2.68457782784319,9.01374701086799,6.30750115259078,20.1890873797071,10.8668705147421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.784158019835,1.94860308839388,1.0629187225069,0.490696182767533,0.982829546539238,0,0,36.3977060455972,8.32195491614299,58.5530930846773,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21146125482298,1.41696576325585,12.4514410064578,3.69209455633359,0.252071696221718,3.18123361335402,3.22951291263702,1.42769420259154,0,0,0,0,0,0,0,1.80504788038217,1.0085253435176,0,0,0,0,3.37687923091973,2.34323429584154,10.3343398250592,2.85371145872581,1.09394961803644,6.030835435429,1.98484471355718,0,0,0,10.7610791110024,0.606965604236632,1.82129753081038,5.41084457992097,13.7128445191377,0.514464028312255,5.30163917219287,3.22286590457961,0,0,3.06123062117005,2.51384943865603,0,0,0,0,3.4308741204795,0,0.116241425368125,0,0,0,0,0,8.17431981758527,0,0,0,0,0,0,0,0,0,0.647428837187895,1.64260490969995,0,0.485710993059139,0,0,0,0,0,0,5.32501690944818,2.84127428655144,0,0.490296643507811,0,9.03018948728748,30.0016864330357,5.0718687310008,0,29.0410306557748,17.8548349686809,0,0,0,0,0.730336388246517,15.5967956357544,23.507691636838,0,3.46756599973665,1.30905207102113,7.40637576721561,0,0,0,0,0,0,0,0,0.0918948995348449,0,2.65225443763838,0,4.97501663675268,18.6179392551411,5.97055149322747,1.1903221573187,13.3053154262173,14.4634084309349,0,1.90941474834495,1.0105859447911,3.9189014621453,0.684466602170562,51.6590246621886,7.67427597701637,0.665320713092027,0.814032686109745,0,0,0,2.34640942403454,1.71138021856013,1.22068853494722,1.33151354837103,38.8458421630681,20.8369519997101 | |||
|short_description=p1@LOC100233209 | |||
}} |
Revision as of 13:10, 11 January 2014
Short description: | p1@LOC100233209 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100233209_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000500365, ENST00000547600, ENST00000547851, ENST00000552975, ENST00000552990, NR_026544, uc001rpp.2_5end |
EntrezGene: | LOC100233209 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.16e-31 | 114 |
hematopoietic system | 1.03e-28 | 98 |
blood island | 1.03e-28 | 98 |
hemolymphoid system | 1.25e-25 | 108 |
immune system | 1.16e-19 | 93 |
bone marrow | 1.38e-19 | 76 |
bone element | 1.17e-16 | 82 |
skeletal element | 1.89e-13 | 90 |
neural tube | 7.36e-11 | 56 |
neural rod | 7.36e-11 | 56 |
future spinal cord | 7.36e-11 | 56 |
neural keel | 7.36e-11 | 56 |
skeletal system | 8.47e-11 | 100 |
regional part of nervous system | 1.05e-09 | 53 |
regional part of brain | 1.05e-09 | 53 |
regional part of forebrain | 2.70e-08 | 41 |
forebrain | 2.70e-08 | 41 |
anterior neural tube | 2.70e-08 | 41 |
future forebrain | 2.70e-08 | 41 |
connective tissue | 1.58e-07 | 371 |
brain grey matter | 1.68e-07 | 34 |
gray matter | 1.68e-07 | 34 |
telencephalon | 1.86e-07 | 34 |
blood | 2.85e-07 | 15 |
haemolymphatic fluid | 2.85e-07 | 15 |
organism substance | 2.85e-07 | 15 |
regional part of telencephalon | 8.03e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.62e-09 | 51 |
immune system cancer | 7.62e-09 | 51 |