FFCP PHASE1:Hg19::chr15:41522949..41522961,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28507 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000558396_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_EXD1_5end | |||
|id=chr15:41522949..41522961,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;2.74e-12;2!CL:0002592;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0002592,1.21e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000008;2.74e-12;2!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.14e-09!57;UBERON:0005068!4.14e-09!57;UBERON:0006241!4.14e-09!57;UBERON:0007135!4.14e-09!57;UBERON:0000955!9.74e-08!69;UBERON:0006238!9.74e-08!69;UBERON:0001017!1.07e-07!82;UBERON:0005743!5.07e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;2.74e-12;2!UBERON:0002702;2.74e-12;2!UBERON:0001875;2.74e-12;2!UBERON:0003566;2.74e-12;2!UBERON:0001777;2.74e-12;2!UBERON:0006514;2.74e-12;2!UBERON:0010225;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0001896;1.26e-08;3!UBERON:0001870;1.26e-08;3!UBERON:0003498;1.26e-08;3!UBERON:0005985;1.26e-08;3!UBERON:0001621;1.26e-08;3!UBERON:0005290;1.26e-08;3!UBERON:0003891;8.85e-07;4!UBERON:0002784;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.07e-12,2;UBERON:0001897,2.32e-12,2;UBERON:0010225,2.32e-12,2;UBERON:0001875,2.90e-12,2;UBERON:0006514,2.90e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0003135,4.08e-09,11;UBERON:0001870,1.04e-08,3;UBERON:0001621,1.21e-08,3;UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3;UBERON:0007023,5.91e-07,114;UBERON:0000073,6.94e-07,53;UBERON:0002616,6.94e-07,53;UBERON:0002784,8.14e-07,4;UBERON:0003075,9.43e-07,82;UBERON:0007284,9.43e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0.397429223405979,0,0,0.0801588202515337,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0.101998217636322,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0.272406812223151,0,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,1.77213635993397,0,0.250381861413,1.14681839138014,0.110929051536852,0,0.415045904808692,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0.294443155503077,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.327796715891087,0.126698501011437,0,0.534434810531121,0,0,4.69827928953084,24.9206641045246,1.65833887891756,0.413731983447581,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p1@EXD1 | |||
}} |
Revision as of 23:04, 11 January 2014
Short description: | p1@EXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EXD1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -8bp_to_ENST00000558396_5end |
EntrezGene: | EXD1 |
HGNC: | 28507 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
smooth muscle cell of the coronary artery | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.07e-12 | 2 |
dorsal plus ventral thalamus | 2.32e-12 | 2 |
thalamic complex | 2.32e-12 | 2 |
globus pallidus | 2.90e-12 | 2 |
pallidum | 2.90e-12 | 2 |
testis | 3.54e-12 | 8 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
male reproductive organ | 4.08e-09 | 11 |
frontal cortex | 1.04e-08 | 3 |
coronary artery | 1.21e-08 | 3 |
medulla oblongata | 1.40e-08 | 3 |
myelencephalon | 1.40e-08 | 3 |
future myelencephalon | 1.40e-08 | 3 |
adult organism | 5.91e-07 | 114 |
regional part of nervous system | 6.94e-07 | 53 |
regional part of brain | 6.94e-07 | 53 |
regional part of diencephalon | 8.14e-07 | 4 |
neural plate | 9.43e-07 | 82 |
presumptive neural plate | 9.43e-07 | 82 |