FFCP PHASE1:Hg19::chr16:29974170..29974210,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124446 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25201 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=172bp_to_uc002duz.2_5end | |||
|description=CAGE_peak_3_at_TMEM219_5end | |||
|id=chr16:29974170..29974210,+ | |||
|ontology_enrichment_celltype=CL:0002009!3.17e-25!65;CL:0002194!3.04e-24!63;CL:0000576!3.04e-24!63;CL:0000040!3.04e-24!63;CL:0000559!3.04e-24!63;CL:0000557!1.28e-22!71;CL:0000839!5.29e-20!70;CL:0002057!1.93e-19!42;CL:0000766!7.83e-18!76;CL:0000860!1.25e-17!45;CL:0000763!2.86e-11!112;CL:0000049!2.86e-11!112;CL:0002078!1.71e-07!44;CL:0000115!2.07e-07!35;CL:0000213!5.55e-07!57;CL:0000215!5.55e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-18;33!CL:0002057;1.32e-18;33!CL:0000473;2.77e-18;39!CL:0000234;2.77e-18;39!CL:0000576;2.35e-16;48!CL:0000766;8.89e-10;69!CL:0000115;1.89e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.13e-28,61;CL:0002194,1.43e-27,59;CL:0000576,1.43e-27,59;CL:0000040,1.43e-27,59;CL:0000559,1.43e-27,59;CL:0000473,9.88e-25,48;CL:0000234,9.88e-25,48;CL:0000557,1.91e-24,67;CL:0000839,5.23e-22,66;CL:0000860,1.91e-21,42;CL:0002057,1.91e-21,42;CL:0000766,5.19e-20,72;CL:0000763,1.14e-12,108;CL:0000049,1.14e-12,108;CL:0000115,3.71e-08,36;CL:0000213,4.66e-08,58;CL:0000215,4.66e-08,58;CL:0002078,1.91e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.24e-24,93;UBERON:0002371,1.65e-22,76;UBERON:0002193,3.78e-21,108;UBERON:0003081,4.27e-21,203;UBERON:0000926,8.88e-21,315;UBERON:0004120,8.88e-21,315;UBERON:0006603,8.88e-21,315;UBERON:0001474,4.64e-19,82;UBERON:0002390,2.94e-18,98;UBERON:0003061,2.94e-18,98;UBERON:0004765,1.45e-17,90;UBERON:0002204,4.87e-17,167;UBERON:0001434,5.73e-17,100;UBERON:0007023,2.20e-09,114;UBERON:0000923,9.40e-08,560;UBERON:0010316,9.40e-08,560;UBERON:0005291,9.40e-08,560;UBERON:0006598,9.40e-08,560;UBERON:0010317,9.40e-08,560;UBERON:0002532,9.40e-08,560;UBERON:0002050,1.06e-07,564 | |||
|phase1_expression=6.35874327446948,3.42560838225573,4.22863212287913,6.00439790118782,4.02264984984559,6.10636966870258,2.53299878168311,1.89515962028049,6.26845507679612,0.491467873003018,4.88460817580699,0.436882744260345,0.527533956456907,1.60896258848061,1.65698687863958,1.34465029290355,1.20538905604795,1.46062018077475,1.46379839637152,0.246242116153576,0.612002073732759,1.56727360739044,0,0.273748850145768,0.251085279189606,0,0,0.0787107813136792,8.26064981382698,0.383829398097213,5.57338043937874,0.919421224478927,0.30120591877825,0.369754010166788,0,0,4.11040615068786,3.87796785972314,4.41197784434312,4.99125002646459,18.5849843619137,8.09734165047449,13.9090806522461,9.16008904311258,9.82477453590904,6.30718559088322,8.13501629169896,7.81218987241469,8.05236564327269,9.78154133895312,8.96562472851852,10.4052181150977,7.92915065694223,10.3277549373412,9.47985406160392,9.60035931667284,7.09555990150399,4.49446968890169,11.6311879100943,8.34415470397843,7.03270838378945,7.25672860410775,8.57693727773017,7.6720455095885,13.0594157382863,8.5107783703671,4.9825779919646,7.28621129244555,9.90817544998383,10.6422533905507,20.5835830895345,11.4166067156145,12.3420331101945,3.59133986730301,5.10250319916104,9.22498040236854,7.30136102452218,6.45760639218477,6.58974905458029,2.28010194992999,1.19350006319454,1.46131323011707,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,2.24203425192614,1.58030450865046,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0.201606743224732,0,0,2.43806866313962,4.69490601792545,1.79007586580942,2.89151321907653,7.01873074890245,2.02785126545153,0,3.40644409211845,0.472674085820339,0.443458794925128,0.175669571386252,6.22150608614135,0.364295288292542,0.370784442784429,4.54366351116557,7.13931922926996,9.04114131528283,2.62339686735876,5.14795419702115,0.74291500265913,3.7764857399674,3.4409383804245,4.85996702250632,4.52246353539208,14.2629808311368,3.85165258716094,2.92592953151535,8.78616981175718,6.40379272836078,7.02913286805807,0.805658634218294,0,0.976248230192678,1.83831540172934,8.91156142669936,3.92918804449951,2.2452937262617,3.0405099730497,1.53316637465883,1.89853131913626,3.11442964681692,0,0,0.436094052142534,2.98183171017191,0.506522046658319,2.25095607382472,1.72101972449288,1.41867352879343,1.12135520028461,1.06748995729705,0.98667019366864,0.933633106199299,2.82892411346345,2.28846664358842,2.57307626996383,3.45705554687999,0.468642863667593,1.24864030732128,1.71141546463335,1.04614076386261,0.117434498643765,0.323745888736263,0.561803226808994,0.816616685019573,0.61417158655884,1.75653827998801,5.94001428641027,6.67620709052104,1.82032272387605,7.18618141816238,0.336672227908132,0.250237039743928,0.277064115484183,2.19488810440419,1.83892677479412,4.95785594391769,0.907457465280168,0.358779271377724,0,2.7551147150743,1.20036438433761,2.26715564324566,2.83404594050192,0.930584281657949,1.68776332241266,0.779496041289589,0,2.30124746605748,7.11242650002772,0.710019185033229,0.201504196455281,0.67824236924195,0.773043412653187,1.09098448236334,2.00763216772303,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,4.69348596989448,3.85944562915731,6.90674606762403,5.57241513638375,6.49691533502627,2.12952240071719,2.52877035117153,1.44606617930089,1.98529150918309,1.08939722046203,0.71181185733329,2.29213223872279,3.53198637225623,1.92373578473195,31.7406845488599,8.41450642820675,4.5273141246454,7.3504355692771,0,0,8.86184860022106,0,0.614942192715568,0.343135620597051,0.219500570817251,1.1240175325762,0.402115889646523,0.277765335475589,0.977424915930974,3.11980435583874,0,0.463721619900307,0.352226082707465,1.44366447761074,2.77791307545966,3.42457474022277,0,0,13.5419353348069,4.91408956792399,4.90482835552803,1.87467667973554,0.335964256397719,0.567100388969546,0.358234090811393,0,0.766765358330422,0.492663237895943,1.32072651019839,0.207328115540772,0.576479813667846,0.88369703398466,2.60341366597893,6.11181480893244,4.68869788840188,1.71072446022705,6.06682206949609,10.5120070245371,9.43227227680908,2.24262168690721,0.87192013766656,1.466765716419,1.29271715757778,28.6125156681506,0,1.06375246633948,4.16029747645464,0.771622122786426,0,0.532844358032199,1.71573592389777,3.25572963234866,0.823240336780769,0.65147236858747,1.42156779497018,0,2.71295439353627,5.22920075160176,1.09970290300263,17.0273292897667,14.0631985600995,6.32501818449095,0.479249710983165,2.29723871668228,0,1.15825045334063,1.64381058040307,0,0,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0.736148950314839,2.00068208423871,2.98391526069709,6.86303843051664,3.39015078714607,3.78485796081443,3.98280810975225,1.50473049863859,2.27407504055985,6.2083842775503,0,0.368738337083406,1.56390506042549,3.52442083432933,4.80400793335198,2.68798433959754,2.80428461064202,1.49418580924822,0.303127571446259,0,0,4.96215615637554,0.460385919864187,0.841980283299221,3.33161788064823,4.09365799253363,1.60853921143608,2.968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| |||
|short_description=p3@TMEM219 | |||
}} |
Revision as of 03:05, 12 January 2014
Short description: | p3@TMEM219 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM219_5end |
Coexpression cluster: | NA |
Association with transcript: | 172bp_to_uc002duz.2_5end |
EntrezGene: | TMEM219 |
HGNC: | 25201 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.13e-28 | 61 |
monopoietic cell | 1.43e-27 | 59 |
monocyte | 1.43e-27 | 59 |
monoblast | 1.43e-27 | 59 |
promonocyte | 1.43e-27 | 59 |
defensive cell | 9.88e-25 | 48 |
phagocyte | 9.88e-25 | 48 |
granulocyte monocyte progenitor cell | 1.91e-24 | 67 |
myeloid lineage restricted progenitor cell | 5.23e-22 | 66 |
classical monocyte | 1.91e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-21 | 42 |
myeloid leukocyte | 5.19e-20 | 72 |
myeloid cell | 1.14e-12 | 108 |
common myeloid progenitor | 1.14e-12 | 108 |
endothelial cell | 3.71e-08 | 36 |
lining cell | 4.66e-08 | 58 |
barrier cell | 4.66e-08 | 58 |
meso-epithelial cell | 1.91e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.24e-24 | 93 |
bone marrow | 1.65e-22 | 76 |
hemolymphoid system | 3.78e-21 | 108 |
lateral plate mesoderm | 4.27e-21 | 203 |
mesoderm | 8.88e-21 | 315 |
mesoderm-derived structure | 8.88e-21 | 315 |
presumptive mesoderm | 8.88e-21 | 315 |
bone element | 4.64e-19 | 82 |
hematopoietic system | 2.94e-18 | 98 |
blood island | 2.94e-18 | 98 |
skeletal element | 1.45e-17 | 90 |
musculoskeletal system | 4.87e-17 | 167 |
skeletal system | 5.73e-17 | 100 |
adult organism | 2.20e-09 | 114 |
germ layer | 9.40e-08 | 560 |
germ layer / neural crest | 9.40e-08 | 560 |
embryonic tissue | 9.40e-08 | 560 |
presumptive structure | 9.40e-08 | 560 |
germ layer / neural crest derived structure | 9.40e-08 | 560 |
epiblast (generic) | 9.40e-08 | 560 |
embryonic structure | 1.06e-07 | 564 |