FFCP PHASE1:Hg19::chr19:2236362..2236395,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10766 | |||
|TSSclassifier=weak | |||
|UniProt=Q15428,Q05DF2 | |||
|association_with_transcript=-420bp_to_ENST00000221494,NM_007165,uc002lvg.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_SF3A2_5end | |||
|id=chr19:2236362..2236395,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.21e-13;2!CL:0002262;1.21e-13;2!CL:1000398;1.21e-13;2!CL:0002577;1.53e-09;3!CL:0002592;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.21e-13,2;CL:1000398,1.21e-13,2;CL:0002577,1.30e-09,3;CL:0002592,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.21e-13;2!UBERON:0003497;1.21e-13;2!UBERON:0003909;1.21e-13;2!UBERON:0003835;1.21e-13;2!UBERON:0000473;1.51e-13;8!UBERON:0003135;4.03e-10;11!UBERON:0003498;1.53e-09;3!UBERON:0005985;1.53e-09;3!UBERON:0001621;1.53e-09;3!UBERON:0001280;1.53e-09;3!UBERON:0004647;1.53e-09;3!UBERON:0001987;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.21e-13,2;UBERON:0003497,1.21e-13,2;UBERON:0003909,1.21e-13,2;UBERON:0003835,1.21e-13,2;UBERON:0000473,1.51e-13,8;UBERON:0003135,4.03e-10,11;UBERON:0001621,1.41e-09,3;UBERON:0001280,1.54e-09,3;UBERON:0004647,1.54e-09,3;UBERON:0005171,1.54e-09,3;UBERON:0001987,1.59e-07,4;UBERON:0004340,1.59e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,13.228886625269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.404364963146632,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0.318852545457645,0,0.191505370132367,0,0,0,0,0.313359791546046,0,0,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.596143835108969,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.138314504928436,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,26.9772165656932,51.9850412502986,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SF3A2 | |||
}} |
Revision as of 20:22, 20 January 2014
Short description: | p4@SF3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SF3A2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -420bp_to_ENST00000221494, NM_007165, uc002lvg.2_5end |
EntrezGene: | SF3A2 |
HGNC: | 10766 |
UniProt: | Q15428Q05DF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.21e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.21e-13 | 2 |
placental epithelial cell | 1.30e-09 | 3 |
smooth muscle cell of the coronary artery | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.21e-13 | 2 |
abdomen blood vessel | 1.21e-13 | 2 |
sinusoid | 1.21e-13 | 2 |
abdominal segment blood vessel | 1.21e-13 | 2 |
testis | 1.51e-13 | 8 |
male reproductive organ | 4.03e-10 | 11 |
coronary artery | 1.41e-09 | 3 |
liver parenchyma | 1.54e-09 | 3 |
liver lobule | 1.54e-09 | 3 |
hepatic duct | 1.54e-09 | 3 |
placenta | 1.59e-07 | 4 |
allantois | 1.59e-07 | 4 |