FFCP PHASE1:Hg19::chr1:46806837..46806885,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31802 | |||
|TSSclassifier=strong | |||
|UniProt=B4DHA4 | |||
|association_with_transcript=0bp_to_ENST00000471871,ENST00000537428,uc009vyg.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_NSUN4_5end | |||
|id=chr1:46806837..46806885,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.07e-09!42;CL:0000860!3.09e-08!45;CL:0000766!6.00e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.07e-18;5!CL:0000511;9.49e-11;1!CL:0002625;9.49e-11;1!CL:0000216;9.49e-11;1!CL:0000163;3.20e-10;9!CL:0000860;4.90e-09;33!CL:0002057;4.90e-09;33!CL:0000473;4.40e-07;39!CL:0000234;4.40e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.43e-18,5;CL:0002028,4.43e-18,5;CL:0000511,7.46e-11,1;CL:0002625,7.46e-11,1;CL:0000216,7.46e-11,1;CL:0000163,2.70e-10,9;CL:0000839,3.41e-10,66;CL:0000557,5.02e-10,67;CL:0000766,2.96e-09,72;CL:0000860,1.37e-07,42;CL:0002057,1.37e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.68e-20;2!UBERON:0005754;3.94e-11;1!UBERON:0005425;9.49e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.89e-22;4!UBERON:0003135;4.83e-22;11!UBERON:0000473;9.89e-20;8!UBERON:0006947;5.37e-14;3!UBERON:0004054;5.37e-14;3!UBERON:0000998;3.94e-11;1!UBERON:0001301;3.94e-11;1!UBERON:0006868;3.94e-11;1!UBERON:0003101;5.66e-11;22!UBERON:0000079;5.66e-11;22!UBERON:0001136;9.49e-11;1!UBERON:0000941;9.49e-11;1!UBERON:0001343;9.49e-11;1!UBERON:0001785;9.49e-11;1!UBERON:0002464;9.49e-11;1!UBERON:0004904;9.49e-11;1!UBERON:0001021;9.49e-11;1!UBERON:0004910;9.49e-11;1!UBERON:0004813;9.49e-11;1!UBERON:0003296;2.36e-10;4!UBERON:0010133;2.36e-10;4!UBERON:0000058;3.00e-09;10!UBERON:0000991;1.24e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,2.42e-22,4;UBERON:0003135,4.35e-22,11;UBERON:0000473,8.18e-20,8;UBERON:0006947,5.37e-14,3;UBERON:0004054,5.37e-14,3;UBERON:0000998,3.41e-11,1;UBERON:0006868,3.41e-11,1;UBERON:0001301,4.58e-11,1;UBERON:0003101,5.38e-11,22;UBERON:0000079,5.38e-11,22;UBERON:0001136,7.46e-11,1;UBERON:0001343,7.46e-11,1;UBERON:0004910,7.46e-11,1;UBERON:0005154,7.46e-11,1;UBERON:0005295,7.46e-11,1;UBERON:0004813,7.46e-11,1;UBERON:0005297,7.46e-11,1;UBERON:0005294,7.46e-11,1;UBERON:0010141,7.46e-11,1;UBERON:0005891,7.46e-11,1;UBERON:0000941,9.97e-11,1;UBERON:0001785,9.97e-11,1;UBERON:0002464,9.97e-11,1;UBERON:0004904,9.97e-11,1;UBERON:0001021,9.97e-11,1;UBERON:0003902,9.97e-11,1;UBERON:0005425,9.97e-11,1;UBERON:0003296,2.25e-10,4;UBERON:0010133,2.25e-10,4;UBERON:0002371,1.04e-08,76;UBERON:0004876,1.76e-08,11;UBERON:0001474,5.43e-08,82;UBERON:0000991,1.16e-07,21;UBERON:0009196,1.16e-07,21;UBERON:0009117,1.16e-07,21;UBERON:0005564,1.16e-07,21;UBERON:0004176,2.55e-07,22;UBERON:0004765,3.51e-07,90;UBERON:0002405,6.52e-07,93 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,1.5369642391746,0.236482229888585,1.03423704220986,1.29096936716765,0,0,0,0.449446968890169,0.306083892370903,1.28371610830437,1.91801137739712,0,0.598390972864896,0.852449501065388,0.580418477257168,0.56738522469114,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,1.47311054395026,0,0,0.425208599930087,0,0.112328631146495,0.450530678524519,0.64290234678832,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,41.7168355460215,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0.985326475791887,0,1.65862492432618,2.16179930125442,2.39860623510122,0,0.381988425558278,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0,0,0.394061520403854,0,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.347249989866585,0.885741385813839,0.361789315876224,0,0.221158519862449,0.295547618953547,0.438770794307945,0.435753854075961,0,0,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0.326465616318295,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0,0,1.65355761355942,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0.0979923974143777,0,2.09672001890436,0,0,0,0,0.193978032976839,0.353024506766001,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0.229073192331831,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0.258565912723101,0.52893040697076,0,0.704815022316672,0.213574825135389,1.41483874589699,0.414239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0.500763722825999,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0.233713309847224,0,0.568209015825267,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0.157723490002507,0.80057074828547,0,0,0.256916900385838,0,0.798169295285756,0.205116364240755,0,0,0.484426936895553,1.42769420259154,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0.253663240775627,0.546974809018219,0,0,0.703484977438482,0,1.60710550763486,0.336283722218824,0.606965604236632,1.36597314810779,0,0.115233987555779,0.171488009437418,0,0.3288638678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| |||
|short_description=p3@NSUN4 | |||
}} |
Revision as of 18:24, 10 January 2014
Short description: | p3@NSUN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NSUN4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000471871, ENST00000537428, uc009vyg.1_5end |
EntrezGene: | NSUN4 |
HGNC: | 31802 |
UniProt: | B4DHA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.43e-18 | 5 |
basophil mast progenitor cell | 4.43e-18 | 5 |
androgen binding protein secreting cell | 7.46e-11 | 1 |
seminiferous tubule epithelial cell | 7.46e-11 | 1 |
Sertoli cell | 7.46e-11 | 1 |
endocrine cell | 2.70e-10 | 9 |
myeloid lineage restricted progenitor cell | 3.41e-10 | 66 |
granulocyte monocyte progenitor cell | 5.02e-10 | 67 |
myeloid leukocyte | 2.96e-09 | 72 |
classical monocyte | 1.37e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-07 | 42 |