FFCP PHASE1:Hg19::chr21:38739562..38739574,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3091 | |||
|TSSclassifier=strong | |||
|UniProt=Q13627,O94789 | |||
|association_with_transcript=-284bp_to_NM_101395,uc002ywg.1,uc002ywh.1,uc002ywi.2,uc010gno.1_5end | |||
|description=CAGE_peak_14_at_DYRK1A_5end | |||
|id=chr21:38739562..38739574,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.22e-16!140;CL:0000037!1.19e-13!172;CL:0000566!1.19e-13!172;CL:0002057!1.02e-12!42;CL:0000988!8.07e-12!182;CL:0002031!9.86e-12!124;CL:0002032!4.09e-11!165;CL:0000837!4.09e-11!165;CL:0000860!5.40e-11!45;CL:0000766!2.35e-10!76;CL:0002087!2.45e-10!119;CL:0000839!1.40e-08!70;CL:0000763!1.46e-08!112;CL:0000049!1.46e-08!112;CL:0000557!1.48e-08!71;CL:0002009!5.09e-08!65;CL:0002194!3.72e-07!63;CL:0000576!3.72e-07!63;CL:0000040!3.72e-07!63;CL:0000559!3.72e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.35e-14;8!CL:0000081;1.58e-10;11!CL:0000775;2.20e-07;3!CL:0000767;4.92e-07;3!CL:0000623;9.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.73e-14,8;CL:0000738,1.60e-10,136;CL:0000081,1.89e-10,11;CL:0000037,1.58e-08,168;CL:0002032,3.81e-08,161;CL:0000837,3.81e-08,161;CL:0000988,7.66e-08,177;CL:0000775,2.02e-07,3;CL:0000767,6.96e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.71e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.96e-13!115;UBERON:0001869!3.62e-12!32;UBERON:0001893!1.48e-11!34;UBERON:0002020!1.91e-11!34;UBERON:0003528!1.91e-11!34;UBERON:0003080!2.62e-11!42;UBERON:0002791!7.07e-11!33;UBERON:0002780!8.89e-11!41;UBERON:0001890!8.89e-11!41;UBERON:0006240!8.89e-11!41;UBERON:0001049!8.02e-10!57;UBERON:0005068!8.02e-10!57;UBERON:0006241!8.02e-10!57;UBERON:0007135!8.02e-10!57;UBERON:0002619!1.06e-08!22;UBERON:0002616!1.78e-08!59;UBERON:0000955!2.30e-08!69;UBERON:0006238!2.30e-08!69;UBERON:0000956!9.12e-08!25;UBERON:0000203!9.12e-08!25;UBERON:0002371!1.04e-07!80;UBERON:0001474!1.31e-07!86;UBERON:0001950!2.06e-07!20;UBERON:0001017!2.22e-07!82;UBERON:0002390!2.53e-07!102;UBERON:0003061!2.53e-07!102;UBERON:0005743!5.68e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.79e-18;32!UBERON:0001893;1.40e-16;34!UBERON:0002791;2.62e-15;32!UBERON:0003528;3.49e-14;34!UBERON:0002020;3.49e-14;34!UBERON:0002619;8.87e-14;22!UBERON:0001950;4.73e-12;20!UBERON:0000956;5.25e-12;25!UBERON:0000203;5.25e-12;25!UBERON:0000200;7.43e-12;6!UBERON:0000369;9.78e-11;4!UBERON:0002435;9.78e-11;4!UBERON:0000204;9.78e-11;4!UBERON:0002780;1.06e-10;41!UBERON:0001890;1.06e-10;41!UBERON:0001873;3.71e-10;2!UBERON:0000955;3.12e-07;68!UBERON:0005383;4.92e-07;3!UBERON:0005382;4.92e-07;3!UBERON:0001017;5.19e-07;75!UBERON:0001870;9.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.94e-20,32;UBERON:0001893,1.75e-18,34;UBERON:0002791,9.79e-17,32;UBERON:0003528,1.24e-15,34;UBERON:0002020,1.24e-15,34;UBERON:0002780,6.26e-15,41;UBERON:0001890,6.26e-15,41;UBERON:0003080,6.26e-15,41;UBERON:0006240,6.26e-15,41;UBERON:0002619,9.22e-14,22;UBERON:0000956,5.43e-12,25;UBERON:0000203,5.43e-12,25;UBERON:0001950,5.77e-12,20;UBERON:0000200,6.52e-12,6;UBERON:0000369,4.74e-11,4;UBERON:0002435,4.74e-11,4;UBERON:0000204,4.74e-11,4;UBERON:0010082,4.74e-11,4;UBERON:0000073,5.39e-11,53;UBERON:0002616,5.39e-11,53;UBERON:0000955,7.71e-11,68;UBERON:0006238,7.71e-11,68;UBERON:0001873,2.32e-10,2;UBERON:0010122,2.32e-10,2;UBERON:0001049,2.84e-10,56;UBERON:0005068,2.84e-10,56;UBERON:0006241,2.84e-10,56;UBERON:0007135,2.84e-10,56;UBERON:0001017,6.23e-10,81;UBERON:0003056,3.16e-09,61;UBERON:0001016,1.27e-08,89;UBERON:0007023,2.93e-07,114;UBERON:0005383,3.61e-07,3;UBERON:0005382,3.61e-07,3;UBERON:0001870,4.88e-07,3 | |||
|phase1_expression=0.726713517082227,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0.527533956456907,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0.246301768349837,0.0787107813136792,1.18009283054671,2.30297638858328,0.928896739896456,0,0,0,0,0,0.587200878669695,0.553995408531877,1.20326668482085,0.868043482863407,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,1.16214518452842,0,1.23882548358041,0.863077176966451,0.512321413058201,0.709446689665756,0.689491361473237,0.645484683583826,2.70852973188684,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0.989553900560148,0.199463657621632,1.70489900213078,0.290209238628584,0.56738522469114,1.86846674698672,0.75374599577023,0,0.217188844705117,0,0.368277635987565,0.632924774881769,0.422510572623884,0.425208599930087,0,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0.59675003159727,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0.587237189370939,1.14681968437569,0,1.12101712596307,0,0.786839080455332,2.35806457649499,1.64481199199607,0.167186495390678,0.651844533267181,0.473447805734733,0,0,0.883817722424512,0.221533894583621,0.541607727530031,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0.296573126324121,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0.383959833463255,0,0.236777252044017,0,1.81446068902259,1.33720097891754,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0.174129737299267,0,0.953962497221368,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.219500570817251,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0.264145302039678,0.621984346622316,0.720599767084807,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0.718874566474748,0,0,0,0.205476322550383,0,0.112085143993527,0.985153801009636,1.07813787429759,1.54011643535698,0.254094624222463,0,0,0.167516265334349,0,2.99602809578873,0,4.55857064779639,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,1.38745825144478,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.206082023295445,0,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0.284567373393656,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,1.4098700508785,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.422008249231538,0.222617410045812,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0.622079175323615,0.0898683511473268,0,0,0.197286811273867,0,0,0.969332746095218,1.48428957058962,1.99613798001194,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,2.65722415744152,1.5677537021303,0,0.774054819518572,0.591095237907095,1.09692698576986,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0.0897576444097721,0.325942115766024,0,0,0,0,0,0.498635045700469,0,0,0.167821586975843,0,0.317873157960757,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0.379119477770928,0.901940516486955,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0,0,0,0.193978032976839,0.353024506766001,0,0,0.19871461170299,1.51945910294109,0,0,0,0.19980960958213,0.288180834308212,0.229073192331831,0.514784993585894,0.14405479798815,0,0,0,0,0,0.288950589901519,0.600420288709789,0.547621515567972,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0.254019996197353,1.59045937961861,0.817220436669454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| |||
|short_description=p14@DYRK1A | |||
}} |
Revision as of 13:41, 21 January 2014
Short description: | p14@DYRK1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_DYRK1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -284bp_to_NM_101395, uc002ywg.1, uc002ywh.1, uc002ywi.2, uc010gno.1_5end |
EntrezGene: | DYRK1A |
HGNC: | 3091 |
UniProt: | Q13627O94789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.73e-14 | 8 |
leukocyte | 1.60e-10 | 136 |
blood cell | 1.89e-10 | 11 |
hematopoietic stem cell | 1.58e-08 | 168 |
hematopoietic oligopotent progenitor cell | 3.81e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.81e-08 | 161 |
hematopoietic cell | 7.66e-08 | 177 |
neutrophil | 2.02e-07 | 3 |
basophil | 6.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 8.94e-20 | 32 |
telencephalon | 1.75e-18 | 34 |
regional part of telencephalon | 9.79e-17 | 32 |
brain grey matter | 1.24e-15 | 34 |
gray matter | 1.24e-15 | 34 |
regional part of forebrain | 6.26e-15 | 41 |
forebrain | 6.26e-15 | 41 |
anterior neural tube | 6.26e-15 | 41 |
future forebrain | 6.26e-15 | 41 |
regional part of cerebral cortex | 9.22e-14 | 22 |
cerebral cortex | 5.43e-12 | 25 |
pallium | 5.43e-12 | 25 |
neocortex | 5.77e-12 | 20 |
gyrus | 6.52e-12 | 6 |
corpus striatum | 4.74e-11 | 4 |
striatum | 4.74e-11 | 4 |
ventral part of telencephalon | 4.74e-11 | 4 |
future corpus striatum | 4.74e-11 | 4 |
regional part of nervous system | 5.39e-11 | 53 |
regional part of brain | 5.39e-11 | 53 |
brain | 7.71e-11 | 68 |
future brain | 7.71e-11 | 68 |
caudate nucleus | 2.32e-10 | 2 |
future caudate nucleus | 2.32e-10 | 2 |
neural tube | 2.84e-10 | 56 |
neural rod | 2.84e-10 | 56 |
future spinal cord | 2.84e-10 | 56 |
neural keel | 2.84e-10 | 56 |
central nervous system | 6.23e-10 | 81 |
pre-chordal neural plate | 3.16e-09 | 61 |
nervous system | 1.27e-08 | 89 |
adult organism | 2.93e-07 | 114 |
caudate-putamen | 3.61e-07 | 3 |
dorsal striatum | 3.61e-07 | 3 |
frontal cortex | 4.88e-07 | 3 |