FFCP PHASE1:Hg19::chr2:241375025..241375048,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |||
|TSSclassifier=strong | |||
|UniProt=P35052 | |||
|association_with_transcript=-39bp_to_ENST00000264039_5end | |||
|description=CAGE_peak_6_at_GPC1_5end | |||
|id=chr2:241375025..241375048,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.38e-21!180;CL:0000220!2.12e-15!246;CL:0002321!3.05e-15!248;CL:0000393!3.60e-09!60;CL:0000211!3.60e-09!60;CL:0000183!4.55e-09!59;CL:0000221!7.55e-09!71;CL:0000680!3.14e-08!57;CL:0000056!3.14e-08!57;CL:0000355!3.14e-08!57;CL:0000187!7.26e-08!54;CL:0002077!2.03e-07!33;CL:0000057!2.73e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002077;5.87e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.89e-12,250;CL:0000393,4.58e-09,61;CL:0000211,4.58e-09,61;CL:0000221,8.65e-09,72;CL:0000680,8.10e-08,58;CL:0000056,8.10e-08,58;CL:0000355,8.10e-08,58;CL:0002077,9.52e-08,34;CL:0000187,1.24e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.57e-26!365;UBERON:0000119!7.97e-20!312;UBERON:0000483!1.28e-19!309;UBERON:0000481!2.43e-18!347;UBERON:0000468!4.26e-15!659;UBERON:0004121!2.81e-14!169;UBERON:0000924!2.48e-13!173;UBERON:0006601!2.48e-13!173;UBERON:0000033!1.65e-12!123;UBERON:0000467!4.36e-12!625;UBERON:0000922!4.72e-12!612;UBERON:0000064!5.90e-12!219;UBERON:0000486!7.09e-12!82;UBERON:0000480!7.97e-12!626;UBERON:0002050!1.09e-11!605;UBERON:0005423!1.09e-11!605;UBERON:0000153!1.23e-11!129;UBERON:0007811!1.23e-11!129;UBERON:0000914!1.24e-11!83;UBERON:0002329!1.24e-11!83;UBERON:0003077!1.24e-11!83;UBERON:0003059!1.24e-11!83;UBERON:0007282!1.24e-11!83;UBERON:0009618!1.24e-11!83;UBERON:0007285!1.24e-11!83;UBERON:0005256!1.63e-11!143;UBERON:0000923!1.68e-11!604;UBERON:0005291!1.68e-11!604;UBERON:0006598!1.68e-11!604;UBERON:0002532!1.68e-11!604;UBERON:0004290!6.89e-10!70;UBERON:0003102!1.36e-09!95;UBERON:0003075!1.53e-09!86;UBERON:0007284!1.53e-09!86;UBERON:0002100!4.16e-09!216;UBERON:0005743!5.13e-09!86;UBERON:0001134!6.76e-09!61;UBERON:0002036!6.76e-09!61;UBERON:0003082!6.76e-09!61;UBERON:0004111!9.19e-09!241;UBERON:0002346!1.74e-08!90;UBERON:0001017!1.75e-08!82;UBERON:0002385!1.91e-08!63;UBERON:0001015!1.91e-08!63;UBERON:0000383!1.91e-08!63;UBERON:0000477!4.20e-08!286;UBERON:0003056!1.43e-07!61;UBERON:0000025!2.47e-07!194;UBERON:0000062!2.94e-07!511;UBERON:0000073!3.14e-07!94;UBERON:0001016!3.14e-07!94;UBERON:0003104!3.62e-07!238;UBERON:0009142!3.62e-07!238;UBERON:0000955!6.78e-07!69;UBERON:0006238!6.78e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.90e-14,309;UBERON:0000483,3.91e-14,306;UBERON:0010314,2.63e-12,132;UBERON:0000486,2.03e-11,83;UBERON:0004121,4.52e-11,171;UBERON:0000924,4.52e-11,171;UBERON:0006601,4.52e-11,171;UBERON:0007524,1.82e-10,73;UBERON:0003077,4.14e-10,72;UBERON:0007285,4.14e-10,72;UBERON:0002329,7.55e-10,71;UBERON:0003059,7.55e-10,71;UBERON:0007282,7.55e-10,71;UBERON:0004290,7.55e-10,71;UBERON:0009618,7.55e-10,71;UBERON:0007503,1.05e-09,78;UBERON:0010371,2.08e-09,104;UBERON:0003102,3.81e-09,99;UBERON:0001134,1.49e-08,62;UBERON:0002036,1.49e-08,62;UBERON:0003082,1.49e-08,62;UBERON:0003075,1.77e-08,82;UBERON:0007284,1.77e-08,82;UBERON:0005423,3.90e-08,581;UBERON:0002385,8.37e-08,64;UBERON:0001015,8.37e-08,64;UBERON:0000383,8.37e-08,64;UBERON:0002050,1.09e-07,564;UBERON:0000922,1.13e-07,592;UBERON:0003104,1.17e-07,160;UBERON:0009142,1.17e-07,160;UBERON:0001017,1.87e-07,81;UBERON:0003056,2.46e-07,61;UBERON:0002346,2.91e-07,86;UBERON:0000923,3.38e-07,560;UBERON:0010316,3.38e-07,560;UBERON:0005291,3.38e-07,560;UBERON:0006598,3.38e-07,560;UBERON:0010317,3.38e-07,560;UBERON:0002532,3.38e-07,560;UBERON:0005256,5.58e-07,122 | |||
|phase1_expression=1.45342703416445,2.78330681058278,1.26858963686374,5.00366491765652,3.12872766099101,3.48935409640147,7.59899634504932,6.94891860769514,8.88031135879451,0.245733936501509,6.28021051175185,2.40285509343189,1.31883489114227,2.10402800032079,3.97676850873499,0.672325146451775,0.602694528023977,1.46062018077475,2.92759679274304,2.46242116153576,2.44800829493104,3.44800193625897,1.14494394852423,3.14811177667634,2.38531015230125,0,0,0,0,0,0.309632246632152,4.59710612239464,4.2168828628955,4.80680213216824,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,3.45228916977532,2.1686349143074,2.50668955317945,2.02785126545153,0.795285947051099,2.91980922181582,3.87592750372678,1.55210578223795,1.22968699970376,0.72038491523742,3.64295288292542,9.26961106961073,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,1.72046919021225,1.04142150482278,1.13061588384802,1.25849830862972,0,0.417989933073621,0.775250277507987,0,0,0.805658634218294,0,1.46437234528902,0,0,0,0.44905874525234,0.563057402416611,0,0.949265659568129,1.28241220751285,0,0,7.84969293856562,0.993943903390637,1.39293562831038,1.72131935057184,3.15520282823695,1.77334191099179,3.36406560085384,1.06748995729705,2.96001058100592,0.933633106199299,2.15537075311501,2.61539044981534,1.05950199351452,2.30470369792,1.17160715916898,1.5608003841516,2.2818872861778,2.69007624993242,1.52664848236894,1.13311061057692,1.82586048712923,1.83738754129404,0.737005903870608,2.9964476540972,0,2.22540236350701,0.910161361938026,4.31170885089743,1.5150250255866,1.7516592782075,0.831192346452549,2.19488810440419,0.919463387397059,1.95309476578576,1.70148274740032,2.69084453533293,1.70845911054854,1.05965950579781,2.70081986475962,0.92747276314595,1.28820270022815,3.35010341396862,1.18143432568886,1.46155507741798,1.00973509697646,1.19664868234989,1.45481451136931,3.90510551768276,1.81353776809752,1.3564847384839,2.12586938479627,1.63647672354501,0.860413786167011,0.365921118388786,1.06023814657188,1.51052125730374,1.34759371519982,1.00928340350251,0.72995471815166,0,5.14592750554308,4.14404764057442,0.928735856063958,2.16563844500876,0.473227200159376,0.842923450390509,0.723033089650446,0.220587945464788,1.08939722046203,0.71181185733329,0,0.588664395376038,0,2.21446636387394,5.60967095213783,3.7041661019826,8.82052268313252,0,0,0.590789906681404,0.441463099414651,0.614942192715568,1.02940686179115,4.49976170175365,6.74410519545717,1.20634766893957,4.44424536760942,0.325808305310325,6.23960871167747,0,3.13012093432707,1.40890433082986,0,0.462985512576611,0,0,1.71697232418975,0,0,0.148631162288728,2.81201501960331,1.00789276919316,1.70130116690864,2.95543124919399,3.48760726216754,8.81780162079986,0,0.264145302039678,0.829312462163088,0.288239906833923,0.37872730027914,1.90493682876507,8.02175693672383,3.51652341630141,3.4214489204541,1.43958489784653,2.40274446275134,2.5724378936752,1.23344192779897,0.87192013766656,1.9067954313447,0.517086863031111,14.3062578340753,1.690605505112,1.86156681609409,3.12022310734098,4.37252536245642,1.41849132023278,5.32844358032199,1.85871391755592,3.7983512377401,0,4.88604276440603,1.06617584622764,1.58390374586686,0.602878754119172,0,1.49959486773086,0,0,0,2.87549826589899,4.59447743336456,0,0.723906533337896,3.08214483825575,2.32779252211864,0.336255431980582,0,0,0,4.57370323600434,1.30139853857622,6.18631050222156,3.68535783735567,5.74144876487847,0,0,0,3.0672872929785,4.00136416847742,1.89885516589815,1.66376689224646,3.56857977594324,2.52323864054295,2.10854546986884,1.20378439891088,2.27407504055985,3.10419213877515,2.65690239414175,0.921845842708516,0.955719759148911,5.67823356641948,19.2160317334079,0,0,0.106727557803444,4.54691357169389,4.99306318531491,3.0239029332968,1.24053903909388,1.2276957863045,2.80660094433074,2.69092213436972,2.55853624533352,3.37793234401576,7.42090332224955,1.69630663182921,2.66342587969691,0.574890092096664,1.03850885836724,1.62694529843943,0.120859449591622,5.61418116849198,4.51196845785892,3.4444334449382,1.82091168006717,4.19598127870157,2.25599806453706,1.5403067420883,6.27479815341484,0,0.949964660035881,0,0.850468526382578,0.215915916102139,1.54227252690289,3.52230368807009,1.50506932156456,1.01950509218015,3.3243040357149,2.23874754722178,0,0,3.59030175162945,0.984043937099117,4.55529752530024,0.412164046590889,3.84591752237042,0.907604499126468,2.29706215198469,4.55042172225565,4.82051789532479,2.70678011217942,4.46740989632469,5.37262861541453,4.27293374702045,2.14840489736547,3.33538396002726,3.66474497889234,7.65675506561941,1.4875642382488,2.30628080838127,1.40373983744043,3.6416801107998,4.18360994367557,1.88887408098384,1.3940745403212,0.924100740528266,1.06461206063404,0.869932992075073,0.74129687641568,2.57624796135584,1.48863347743867,0,2.09693213316207,5.37385361753801,3.42351190427136,1.27281299170375,0,2.87795932133304,2.19629623788844,1.88499843753098,1.81964233415984,4.75530963519025,0.842516912477962,4.8763373908959,1.46228093778771,3.16950440270266,1.77449884830381,3.95935209470396,3.39024349860728,1.10273068709225,3.3171948762061,1.75380354101505,4.6302042741335,2.62357900818653,1.82619339266434,0.30982349809975,3.66204283291914,0.573645408816206,2.06322986127554,0.7133421029625,1.41904425628239,2.53329162357197,0.658589785919804,3.79473173765715,2.79947776195986,1.25088746543166,7.37332503089366,3.26672954583968,0.0941438007767792,9.47111819876706,10.1082885400575,14.6331950667103,7.12142540641574,0,0,0,0,0,0,0,0,0.534120355637366,4.81239927631679,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.748562161632879,0.586032717087576,2.30584991324076,0,0.284136146806413,0.23874448473769,2.07875276582847,1.22864280839693,4.97073823883149,2.2507106625682,0.111308705022906,0.329607748453519,1.68900326502395,1.59398390600856,0.828851746593443,0,0.818149460017238,0,2.17727711363265,0.898683511473268,0.716084698702437,0,0.789147245095469,0,0,7.75466196876175,1.20598527610407,11.9768278800717,0.520855522170466,0.174919999992391,2.17499872630438,3.18621655199399,0.254253650292766,0.709163045303809,1.37897349296586,0.291604613383254,1.04174996959975,0.885741385813839,2.29133233388275,4.5774520895125,2.65390223834939,3.54657142744257,1.31631238292384,0.10893846351899,3.20674611840788,1.38510465306835,0.797594390929008,4.84184199214926,0.718061155278177,0.434589487688032,0.31900115973192,2.01514705484097,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.989471500037586,0,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,1.14581926067151,1.60515529459758,3.04543779442941,0,1.17398771359254,0.728341138602278,0.394584402849391,0,2.14250933141343,0.63186579628488,0.300646838828985,0.311064574191741,0,0,0.313932918407225,0,0,2.4961441142365,0.347119476670262,3.91969589657511,0.957651272384428,1.7472666824203,1.0319161948297,0.0967563312890851,0.730893170861856,0.739039113478883,1.26085721434945,0.441280633457501,0.677942222341597,1.09633539717401,0.794858446811959,1.58276989889697,0.586654148204409,0.881747022766871,0.640358984218058,2.19790570540343,0.576361668616424,0.80175617316141,0,0.576219191952599,0.621262677827163,1.41416420770077,2.31037150325144,2.30126261887133,0.815985741090574,0.577901179803038,1.20084057741958,1.09524303113594,1.27746588066972,3.86788897277961,0,1.39641200636127,0.916641696046735,1.43574604915363,3.99358000997982,3.004582336956,1.33902874465124,1.61240333968143,0.720599767084807,2.32991899054908,0.157566364614447,0.412079291905832,0.202210631562555,0.0984274815147488,0,2.38568906942791,2.31545790389679,1.12527203925513,1.2378549293751,1.66176135211674,0.2249738915515,2.32140586367385,1.57948847310864,5.36695500158826,0.236417121897595,1.04909176269996,0,1.07572403599707,0.959575986597226,0.714695326373367,2.64836788146173,2.5426853765475,6.51599522104455,1.72844298240254,2.28611152076586,2.39460383124975,0,4.60047658820639,0.566560457600628,0.439656701034247,0,1.93924434542326,0.92562821219883,1.02652102730598,1.40963004463334,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,2.1760712134779,0.5013797880454,0.612691153526923,0.327872630709804,0,2.65820453990096,2.56255156294123,1.001527445652,0.573409195690071,0.443716206147409,0.745156835296601,0,2.74956897516635,0.303298235083296,0.570930667089935,1.88212655758537,0.468334905806882,0.434763085832475,0.895528817321244,1.8697064787778,0,1.51522404220071,2.26411111577318,0.889811221596536,4.34796129954155,2.57092570397506,1.70980920641059,1.62640664988597,1.11507737014592,0.899606224327209,0.776314784381297,2.90294345488599,2.12673371646396,0.521745061811734,1.95334891696384,2.28483127301277,0,1.09109195521536,0.966695013382396,3.24823631914946,1.59238355479446,2.40016658797892,0.686791410365586,0.336749488765919,2.52369796457302,2.50405779529494,0.857766365499703,0.782982875895635,2.04035332961045,0.926089897295336,0.244736704506468,1.61179956973339,2.16161013012681,2.63140859494449,0.883445729729405,1.15748422962549,1.18259708457151,1.02496607435179,1.38172136692479,0.607719912354764,1.38258436151731,0.194860308839388,0.398594520940089,0.163565394255844,0.327609848846413,5.16123108382811,0.633936370075881,0,0.106691729694141,0,0.567515953566836,0,3.776746708425,3.73246356019784,0.127894371303652,0.862598491173454,0,0.873677105536111,0.33946505990805,0,0.247871528518004,0,1.27201740261367,0.0788617450012534,0,3.17408349321616,2.7562092961788,2.6976274540513,4.25089728976755,0.957803154342908,2.2562800066483,2.7727886584389,2.48966108871184,2.42213468447777,1.42769420259154,2.94443155503077,5.07269810395284,2.20114318226015,2.77261598760812,3.4324388592045,0.690359926060101,3.1826595538604,1.72983755203292,0.20170506870352,1.56302802246618,1.04762677792569,0.163771917510097,0.295712172434091,2.36381546164381,1.56215619722769,1.65349437200947,2.09272173639893,2.18789923607288,0,0.496211178389294,0.703484977438482,2.55524855279191,0,0,1.21393120847326,0.682986574053893,0.0887023701626388,0.115233987555779,1.37190407549935,1.01954599465248,1.97318320688547,1.77290761325952,0.444925607568277,0.470958557103084,3.45654297815204,0.280272163313789,0.913158720509496,0.431855182437243,0,0.78624198594322,0.632054446930906,0.348724276104376,0.521574816907738,0,3.72989095493466,4.26796192734875,2.76503864725637,0.430227358820278,0.118332000730565,0,0.423387050190929,0.22910686854405,0.93061915699296,2.8666168169323,2.9082412267426,0.687051635306701,0.365753774946808,1.29485767437579,3.59319823996865,2.3196288626764,0,1.16969731731053,0,0.594600453887843,0,0.329821550236287,1.20770274853339,0.0771741581079447,0.437119121007915,0,0.980593287015622,0.471353094203252,1.76677620403451,0.594092800654172,2.113278637917,2.20905249094162,0,0.515663103788617,0,1.2498775702396,0.705789743431384,0.641930933513346,0.730336388246517,0,1.00337708206016,0.473314686579554,2.99162556840025,1.74540276136151,0.5290268405154,3.34795516350076,0.462175628631418,2.16313281061895,1.13549782351571,1.31118686356435,0.253397002022874,0.203977659483963,0,0.275684698604535,0,1.06090177505535,2.14371304124943,1.65833887891756,1.44806194206653,1.70587185520785,1.66645102024618,0.387533459016037,0.372448285775147,0.560659312903067,0.445530107947154,1.0105859447911,2.17716747896961,2.73786640868225,0.606168477131288,0.932388670104793,0,1.62806537221949,1.3874554964103,1.9307228228694,0.269475606319761,7.03922827210363,0.733448665097199,2.03448089157869,0,1.00636896795513,0 | |||
|short_description=p6@GPC1 | |||
}} |
Revision as of 09:34, 21 January 2014
Short description: | p6@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000264039_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | P35052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.89e-12 | 250 |
electrically responsive cell | 4.58e-09 | 61 |
electrically active cell | 4.58e-09 | 61 |
ectodermal cell | 8.65e-09 | 72 |
muscle precursor cell | 8.10e-08 | 58 |
myoblast | 8.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.10e-08 | 58 |
ecto-epithelial cell | 9.52e-08 | 34 |
muscle cell | 1.24e-07 | 55 |