FFCP PHASE1:Mm9::chr11:106134241..106134320,-: Difference between revisions
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{{FFCP|EntrezGene=83796|HGNC=|MCL_coexpression_id=36|UniProt=Q99JR8,Q3TXH6|association_with_transcript=0bp_to_ENSMUST00000021052,ENSMUST00000155243,NM_001130187,uc007lyp.2_5end|description=CAGE_peak_2_at_Smarcd2_5end|id=chr11:106134241..106134320,-|ontology_enrichment_celltype=CL:0002031!9.75e-10!25;CL:0002320!5.80e-07!46;CL:0000134!5.80e-07!46;CL:0000838!8.81e-07!12|ontology_enrichment_celltype_v019_2=CL:0002031,9.64e-10,25;CL:0002320,5.75e-07,46;CL:0000134,5.75e-07,46;CL:0000838,8.81e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.16e-18!70;UBERON:0005911!2.51e-16!69;UBERON:0004119!3.57e-16!130;UBERON:0000925!3.57e-16!130;UBERON:0006595!3.57e-16!130;UBERON:0001007!8.04e-16!128;UBERON:0001555!8.04e-16!128;UBERON:0007026!8.04e-16!128;UBERON:0002390!1.32e-15!45;UBERON:0003061!1.32e-15!45;UBERON:0002193!1.33e-15!48;UBERON:0004921!2.57e-15!126;UBERON:0004185!2.57e-15!126;UBERON:0000490!2.67e-15!66;UBERON:0000926!1.17e-14!193;UBERON:0004120!1.17e-14!193;UBERON:0006603!1.17e-14!193;UBERON:0005057!3.78e-14!51;UBERON:0003929!4.12e-14!55;UBERON:0003104!2.89e-13!131;UBERON:0009142!2.89e-13!131;UBERON:0000077!3.27e-13!97;UBERON:0001041!1.06e-12!92;UBERON:0004177!8.81e-12!29;UBERON:0002530!1.42e-10!65;UBERON:0002368!4.57e-10!60;UBERON:0002370!2.72e-09!23;UBERON:0000974!2.72e-09!23;UBERON:0004807!2.72e-09!23;UBERON:0005058!2.72e-09!23;UBERON:0003351!2.72e-09!23;UBERON:0009113!2.72e-09!23;UBERON:0003295!2.72e-09!23;UBERON:0009722!2.72e-09!23;UBERON:0005562!2.72e-09!23;UBERON:0007690!2.72e-09!23;UBERON:0003408!3.61e-09!24;UBERON:0006562!4.18e-09!24;UBERON:0001557!4.18e-09!24;UBERON:0001042!4.18e-09!24;UBERON:0008814!4.18e-09!24;UBERON:0009145!4.18e-09!24;UBERON:0000065!4.97e-09!41;UBERON:0001004!5.22e-09!42;UBERON:0000949!6.78e-09!72;UBERON:0003081!3.81e-08!88;UBERON:0001048!8.46e-08!147;UBERON:0000466!2.44e-07!79;UBERON:0000072!3.35e-07!27;UBERON:0002384!5.80e-07!46;UBERON:0004923!8.29e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.49e-17,118;UBERON:0000925,5.49e-17,118;UBERON:0006595,5.49e-17,118;UBERON:0001007,1.21e-16,116;UBERON:0001555,1.21e-16,116;UBERON:0007026,1.21e-16,116;UBERON:0005911,2.48e-16,69;UBERON:0004921,3.87e-16,114;UBERON:0002390,1.31e-15,45;UBERON:0003061,1.31e-15,45;UBERON:0002193,1.32e-15,48;UBERON:0002405,1.32e-15,48;UBERON:0000490,2.64e-15,66;UBERON:0003929,4.08e-14,55;UBERON:0001041,6.63e-14,80;UBERON:0004177,8.70e-12,29;UBERON:0005057,8.70e-12,29;UBERON:0000077,1.25e-11,35;UBERON:0000926,2.08e-11,120;UBERON:0004120,2.08e-11,120;UBERON:0006603,2.08e-11,120;UBERON:0002530,1.41e-10,65;UBERON:0002368,4.53e-10,60;UBERON:0002370,2.69e-09,23;UBERON:0000974,2.69e-09,23;UBERON:0004807,2.69e-09,23;UBERON:0005058,2.69e-09,23;UBERON:0003351,2.69e-09,23;UBERON:0009113,2.69e-09,23;UBERON:0003295,2.69e-09,23;UBERON:0009722,2.69e-09,23;UBERON:0005562,2.69e-09,23;UBERON:0007690,2.69e-09,23;UBERON:0003408,3.57e-09,24;UBERON:0006562,4.13e-09,24;UBERON:0001557,4.13e-09,24;UBERON:0001042,4.13e-09,24;UBERON:0008814,4.13e-09,24;UBERON:0009145,4.13e-09,24;UBERON:0000065,4.93e-09,41;UBERON:0001004,5.18e-09,42;UBERON:0000949,6.73e-09,72;UBERON:0003081,2.86e-08,87;UBERON:0001048,3.81e-08,134;UBERON:0000072,3.32e-07,27;UBERON:0002384,5.75e-07,46;UBERON:0004923,8.29e-07,24|phase1_expression=6.24580503708696,24.7772539423946,27.2999543633722,29.3390284967625,30.5546395267272,18.298840638396,14.7175963575181,44.805793234227,31.677462484125,26.6833560007073,29.1070545983358,31.9088635981346,44.6833905120447,50.3541517933425,24.3170126125434,29.5613890389146,32.1798463938947,59.1491560046696,54.9828878759012,53.8974857783498,10.970584429488,19.1631535817709,10.9703911438353,15.1992801653736,16.9762867989706,25.8404383851759,14.2151458732495,17.453169847557,11.0213583284697,16.1299283046356,8.64748991555688,17.7808588568697,22.7573971406291,0,10.9763615505484,14.9611180822643,17.7627339948261,38.9234416585324,32.8160844699996,35.0760908462445,53.5290654108223,54.6436387966757,55.3481802455515,10.7012295279241,13.1790010585369,11.7469921383476,29.7308710852255,6.75877984779384,10.9843091367236,13.2212331370513,12.1788186814065,5.75010257459886,60.9050859989583,43.5217285206807,46.0448504825176,14.406528418013,16.9054729563866,20.1112115988203,1.01158230429799,2.64495489636016,1.90149421051854,9.14880236586657,7.11435836888911,30.1466405289269,22.7439263390404,34.8135256323589,14.3808053048834,17.28982373947,3.83651565541367,3.37514845829227,3.36519938162211,4.57041575046086,1.54607978666129,2.08234358665422,3.25874601462004,0.919218786610021,4.40463523997555,3.70293280447044,5.06901559745603,1.45074916503213,1.64677758484337,1.04182674111352,5.02529398202486,3.37657566019008,3.51435969886663,2.94628585473668,2.70506193518296,0.931997229126503,7.79979791331796,8.31287161174641,11.5945795480671,12.9063581547208,9.51959867190851,35.0807074564581,22.7421746106684,17.9210754838934,17.2746636762055,5.11290967734173,5.45550609666024,7.42013106471715,5.352049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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:83796 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99JR8,uniprot:Q3TXH6 | |||
|association_with_transcript=0bp_to_ENSMUST00000021052,ENSMUST00000155243,NM_001130187,uc007lyp.2_5end | |||
|cluster_id=chr11:106134241..106134320,- | |||
|description=CAGE_peak_2_at_Smarcd2_5end | |||
|id=chr11:106134241..106134320,- | |||
|ontology_enrichment_celltype=CL:0002031!9.75e-10!25;CL:0002320!5.80e-07!46;CL:0000134!5.80e-07!46;CL:0000838!8.81e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,9.64e-10,25;CL:0002320,5.75e-07,46;CL:0000134,5.75e-07,46;CL:0000838,8.81e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.16e-18!70;UBERON:0005911!2.51e-16!69;UBERON:0004119!3.57e-16!130;UBERON:0000925!3.57e-16!130;UBERON:0006595!3.57e-16!130;UBERON:0001007!8.04e-16!128;UBERON:0001555!8.04e-16!128;UBERON:0007026!8.04e-16!128;UBERON:0002390!1.32e-15!45;UBERON:0003061!1.32e-15!45;UBERON:0002193!1.33e-15!48;UBERON:0004921!2.57e-15!126;UBERON:0004185!2.57e-15!126;UBERON:0000490!2.67e-15!66;UBERON:0000926!1.17e-14!193;UBERON:0004120!1.17e-14!193;UBERON:0006603!1.17e-14!193;UBERON:0005057!3.78e-14!51;UBERON:0003929!4.12e-14!55;UBERON:0003104!2.89e-13!131;UBERON:0009142!2.89e-13!131;UBERON:0000077!3.27e-13!97;UBERON:0001041!1.06e-12!92;UBERON:0004177!8.81e-12!29;UBERON:0002530!1.42e-10!65;UBERON:0002368!4.57e-10!60;UBERON:0002370!2.72e-09!23;UBERON:0000974!2.72e-09!23;UBERON:0004807!2.72e-09!23;UBERON:0005058!2.72e-09!23;UBERON:0003351!2.72e-09!23;UBERON:0009113!2.72e-09!23;UBERON:0003295!2.72e-09!23;UBERON:0009722!2.72e-09!23;UBERON:0005562!2.72e-09!23;UBERON:0007690!2.72e-09!23;UBERON:0003408!3.61e-09!24;UBERON:0006562!4.18e-09!24;UBERON:0001557!4.18e-09!24;UBERON:0001042!4.18e-09!24;UBERON:0008814!4.18e-09!24;UBERON:0009145!4.18e-09!24;UBERON:0000065!4.97e-09!41;UBERON:0001004!5.22e-09!42;UBERON:0000949!6.78e-09!72;UBERON:0003081!3.81e-08!88;UBERON:0001048!8.46e-08!147;UBERON:0000466!2.44e-07!79;UBERON:0000072!3.35e-07!27;UBERON:0002384!5.80e-07!46;UBERON:0004923!8.29e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.49e-17,118;UBERON:0000925,5.49e-17,118;UBERON:0006595,5.49e-17,118;UBERON:0001007,1.21e-16,116;UBERON:0001555,1.21e-16,116;UBERON:0007026,1.21e-16,116;UBERON:0005911,2.48e-16,69;UBERON:0004921,3.87e-16,114;UBERON:0002390,1.31e-15,45;UBERON:0003061,1.31e-15,45;UBERON:0002193,1.32e-15,48;UBERON:0002405,1.32e-15,48;UBERON:0000490,2.64e-15,66;UBERON:0003929,4.08e-14,55;UBERON:0001041,6.63e-14,80;UBERON:0004177,8.70e-12,29;UBERON:0005057,8.70e-12,29;UBERON:0000077,1.25e-11,35;UBERON:0000926,2.08e-11,120;UBERON:0004120,2.08e-11,120;UBERON:0006603,2.08e-11,120;UBERON:0002530,1.41e-10,65;UBERON:0002368,4.53e-10,60;UBERON:0002370,2.69e-09,23;UBERON:0000974,2.69e-09,23;UBERON:0004807,2.69e-09,23;UBERON:0005058,2.69e-09,23;UBERON:0003351,2.69e-09,23;UBERON:0009113,2.69e-09,23;UBERON:0003295,2.69e-09,23;UBERON:0009722,2.69e-09,23;UBERON:0005562,2.69e-09,23;UBERON:0007690,2.69e-09,23;UBERON:0003408,3.57e-09,24;UBERON:0006562,4.13e-09,24;UBERON:0001557,4.13e-09,24;UBERON:0001042,4.13e-09,24;UBERON:0008814,4.13e-09,24;UBERON:0009145,4.13e-09,24;UBERON:0000065,4.93e-09,41;UBERON:0001004,5.18e-09,42;UBERON:0000949,6.73e-09,72;UBERON:0003081,2.86e-08,87;UBERON:0001048,3.81e-08,134;UBERON:0000072,3.32e-07,27;UBERON:0002384,5.75e-07,46;UBERON:0004923,8.29e-07,24 | |||
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| |||
|short_description=p2@Smarcd2 | |||
}} |
Revision as of 07:33, 5 August 2015
Short description: | p2@Smarcd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smarcd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000021052, ENSMUST00000155243, NM_001130187, uc007lyp.2_5end |
EntrezGene: | 83796 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 9.64e-10 | 25 |
connective tissue cell | 5.75e-07 | 46 |
mesenchymal cell | 5.75e-07 | 46 |
lymphoid lineage restricted progenitor cell | 8.81e-07 | 12 |