FFCP PHASE1:Mm9::chr11:86829486..86829491,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=94|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:86829486..86829491,+|id=chr11:86829486..86829491,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,8.50e-08,1;CL:0002078,8.50e-08,1;CL:0000115,8.50e-08,1;CL:0002262,8.50e-08,1;CL:1000398,8.50e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!1.83e-12!17;UBERON:0002048!3.48e-11!14;UBERON:0000117!3.48e-11!14;UBERON:0000171!3.48e-11!14;UBERON:0000170!3.48e-11!14;UBERON:0005597!3.48e-11!14;UBERON:0000118!3.48e-11!14;UBERON:0005178!3.09e-08!17;UBERON:0005181!3.09e-08!17;UBERON:0002224!3.09e-08!17;UBERON:0000915!3.09e-08!17;UBERON:0008947!3.09e-08!17;UBERON:0003258!3.09e-08!17;UBERON:0005157!7.92e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.73e-36,14;UBERON:0000117,2.73e-36,14;UBERON:0000171,2.73e-36,14;UBERON:0000170,2.73e-36,14;UBERON:0005597,2.73e-36,14;UBERON:0000118,2.73e-36,14;UBERON:0005153,9.40e-30,17;UBERON:0005178,9.40e-30,17;UBERON:0005181,9.40e-30,17;UBERON:0002224,9.40e-30,17;UBERON:0000915,9.40e-30,17;UBERON:0008947,9.40e-30,17;UBERON:0003258,9.40e-30,17;UBERON:0005157,3.59e-25,20;UBERON:0000065,8.06e-12,41;UBERON:0001004,1.62e-11,42;UBERON:0000310,3.83e-10,6;UBERON:0001443,3.83e-10,6;UBERON:0009569,1.11e-08,66;UBERON:0005911,2.99e-08,69;UBERON:0002394,8.50e-08,1;UBERON:0001281,8.50e-08,1;UBERON:0000353,8.50e-08,1;UBERON:0003497,8.50e-08,1;UBERON:0003909,8.50e-08,1;UBERON:0003928,8.50e-08,1;UBERON:0003835,8.50e-08,1;UBERON:0003513,8.50e-08,1;UBERON:0001280,8.50e-08,1;UBERON:0004647,8.50e-08,1;UBERON:0002294,8.50e-08,1;UBERON:0001173,8.50e-08,1;UBERON:0004912,8.50e-08,1;UBERON:0005171,8.50e-08,1;UBERON:0006834,2.37e-07,1;UBERON:0005177,4.72e-07,79;UBERON:0001041,5.99e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0,0.536546802799238,0.116765342367169,0.16455984991348,0.656669856316381,0.405344047729279,1.31579988682799,0.658650345873152,1.07365135008297,0,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0.325929952884052,0.678980343100753,1.87752198630802,2.1775813467436,0.952174563544055,0.780534591431195,3.31033802623001,1.7717175171902,1.43509291791738,4.58817281204066,4.31712454664739,3.03763023021174,0,0,0.491764273019036,0.275936746304732,0,0.468846746368813,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0.302323556964751,0.943025398779491,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.704015124191131,0.42366414172764,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0,1.12609485270709,0.36630324853453,0.643105137237198,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.758091635291392,0,0.188626341386076,0.655490552289177,0.256100609619477,0.34461281373368,0,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.761531471025089,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0.695603506861264|short_description=p@chr11:86829486..86829491,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:86829486..86829491,+ | |||
|description=CAGE_peak_at_chr11:86829486..86829491,+ | |||
|id=chr11:86829486..86829491,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.50e-08,1;CL:0002078,8.50e-08,1;CL:0000115,8.50e-08,1;CL:0002262,8.50e-08,1;CL:1000398,8.50e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!1.83e-12!17;UBERON:0002048!3.48e-11!14;UBERON:0000117!3.48e-11!14;UBERON:0000171!3.48e-11!14;UBERON:0000170!3.48e-11!14;UBERON:0005597!3.48e-11!14;UBERON:0000118!3.48e-11!14;UBERON:0005178!3.09e-08!17;UBERON:0005181!3.09e-08!17;UBERON:0002224!3.09e-08!17;UBERON:0000915!3.09e-08!17;UBERON:0008947!3.09e-08!17;UBERON:0003258!3.09e-08!17;UBERON:0005157!7.92e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.73e-36,14;UBERON:0000117,2.73e-36,14;UBERON:0000171,2.73e-36,14;UBERON:0000170,2.73e-36,14;UBERON:0005597,2.73e-36,14;UBERON:0000118,2.73e-36,14;UBERON:0005153,9.40e-30,17;UBERON:0005178,9.40e-30,17;UBERON:0005181,9.40e-30,17;UBERON:0002224,9.40e-30,17;UBERON:0000915,9.40e-30,17;UBERON:0008947,9.40e-30,17;UBERON:0003258,9.40e-30,17;UBERON:0005157,3.59e-25,20;UBERON:0000065,8.06e-12,41;UBERON:0001004,1.62e-11,42;UBERON:0000310,3.83e-10,6;UBERON:0001443,3.83e-10,6;UBERON:0009569,1.11e-08,66;UBERON:0005911,2.99e-08,69;UBERON:0002394,8.50e-08,1;UBERON:0001281,8.50e-08,1;UBERON:0000353,8.50e-08,1;UBERON:0003497,8.50e-08,1;UBERON:0003909,8.50e-08,1;UBERON:0003928,8.50e-08,1;UBERON:0003835,8.50e-08,1;UBERON:0003513,8.50e-08,1;UBERON:0001280,8.50e-08,1;UBERON:0004647,8.50e-08,1;UBERON:0002294,8.50e-08,1;UBERON:0001173,8.50e-08,1;UBERON:0004912,8.50e-08,1;UBERON:0005171,8.50e-08,1;UBERON:0006834,2.37e-07,1;UBERON:0005177,4.72e-07,79;UBERON:0001041,5.99e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0,0.536546802799238,0.116765342367169,0.16455984991348,0.656669856316381,0.405344047729279,1.31579988682799,0.658650345873152,1.07365135008297,0,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0.325929952884052,0.678980343100753,1.87752198630802,2.1775813467436,0.952174563544055,0.780534591431195,3.31033802623001,1.7717175171902,1.43509291791738,4.58817281204066,4.31712454664739,3.03763023021174,0,0,0.491764273019036,0.275936746304732,0,0.468846746368813,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0.302323556964751,0.943025398779491,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.704015124191131,0.42366414172764,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0,1.12609485270709,0.36630324853453,0.643105137237198,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.758091635291392,0,0.188626341386076,0.655490552289177,0.256100609619477,0.34461281373368,0,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.761531471025089,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr11:86829486..86829491,+ | |||
}} |
Latest revision as of 06:31, 4 August 2015
Short description: | p@chr11:86829486..86829491, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86829486..86829491, + |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.50e-08 | 1 |
meso-epithelial cell | 8.50e-08 | 1 |
endothelial cell | 8.50e-08 | 1 |
endothelial cell of sinusoid | 8.50e-08 | 1 |
endothelial cell of hepatic sinusoid | 8.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lung | 2.73e-36 | 14 |
respiratory tube | 2.73e-36 | 14 |
respiration organ | 2.73e-36 | 14 |
pair of lungs | 2.73e-36 | 14 |
lung primordium | 2.73e-36 | 14 |
lung bud | 2.73e-36 | 14 |
epithelial bud | 9.40e-30 | 17 |
thoracic cavity element | 9.40e-30 | 17 |
thoracic segment organ | 9.40e-30 | 17 |
thoracic cavity | 9.40e-30 | 17 |
thoracic segment of trunk | 9.40e-30 | 17 |
respiratory primordium | 9.40e-30 | 17 |
endoderm of foregut | 9.40e-30 | 17 |
epithelial fold | 3.59e-25 | 20 |
respiratory tract | 8.06e-12 | 41 |
respiratory system | 1.62e-11 | 42 |
breast | 3.83e-10 | 6 |
chest | 3.83e-10 | 6 |
subdivision of trunk | 1.11e-08 | 66 |
endo-epithelium | 2.99e-08 | 69 |
bile duct | 8.50e-08 | 1 |
hepatic sinusoid | 8.50e-08 | 1 |
parenchyma | 8.50e-08 | 1 |
abdomen blood vessel | 8.50e-08 | 1 |
sinusoid | 8.50e-08 | 1 |
digestive system duct | 8.50e-08 | 1 |
abdominal segment blood vessel | 8.50e-08 | 1 |
trunk blood vessel | 8.50e-08 | 1 |
liver parenchyma | 8.50e-08 | 1 |
liver lobule | 8.50e-08 | 1 |
biliary system | 8.50e-08 | 1 |
biliary tree | 8.50e-08 | 1 |
biliary bud | 8.50e-08 | 1 |
hepatic duct | 8.50e-08 | 1 |
uterus or analog | 2.37e-07 | 1 |
trunk region element | 4.72e-07 | 79 |
foregut | 5.99e-07 | 80 |