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FFCP PHASE1:Mm9::chr5:74038959..74038993,-: Difference between revisions

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{{FFCP|EntrezGene=24051|HGNC=|MCL_coexpression_id=311|UniProt=F8WIL1,P82349,Q9CYD9|association_with_transcript=0bp_to_ENSMUST00000087175,NM_011890,uc008xtb.1_5end|description=CAGE_peak_1_at_Sgcb_5end|id=chr5:74038959..74038993,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.63e-13!75;UBERON:0001016!1.63e-13!75;UBERON:0004121!2.80e-13!102;UBERON:0000924!2.80e-13!102;UBERON:0006601!2.80e-13!102;UBERON:0001017!1.34e-12!73;UBERON:0005743!1.34e-12!73;UBERON:0001049!1.79e-10!52;UBERON:0005068!1.79e-10!52;UBERON:0006241!1.79e-10!52;UBERON:0007135!1.79e-10!52;UBERON:0002346!2.22e-10!71;UBERON:0003075!2.22e-10!71;UBERON:0007284!2.22e-10!71;UBERON:0000033!2.71e-10!63;UBERON:0000955!1.07e-09!50;UBERON:0006238!1.07e-09!50;UBERON:0002616!2.63e-09!49;UBERON:0007100!9.85e-08!18;UBERON:0000948!9.85e-08!18;UBERON:0005498!9.85e-08!18;UBERON:0004140!9.85e-08!18;UBERON:0009881!9.85e-08!18;UBERON:0004141!9.85e-08!18;UBERON:0003084!9.85e-08!18;UBERON:0007005!9.85e-08!18;UBERON:0004139!9.85e-08!18;UBERON:0004291!9.85e-08!18;UBERON:0002020!2.31e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.78e-18,92;UBERON:0001016,1.63e-13,75;UBERON:0004121,2.28e-13,95;UBERON:0000924,2.28e-13,95;UBERON:0006601,2.28e-13,95;UBERON:0001017,1.34e-12,73;UBERON:0000073,3.07e-11,54;UBERON:0002346,1.20e-10,64;UBERON:0003075,1.20e-10,64;UBERON:0007284,1.20e-10,64;UBERON:0001049,1.79e-10,52;UBERON:0005068,1.79e-10,52;UBERON:0006241,1.79e-10,52;UBERON:0007135,1.79e-10,52;UBERON:0010371,2.10e-10,73;UBERON:0000955,1.60e-08,47;UBERON:0006238,1.60e-08,47;UBERON:0002616,3.81e-08,46;UBERON:0007100,9.84e-08,18;UBERON:0000948,9.84e-08,18;UBERON:0005498,9.84e-08,18;UBERON:0004140,9.84e-08,18;UBERON:0009881,9.84e-08,18;UBERON:0004141,9.84e-08,18;UBERON:0003084,9.84e-08,18;UBERON:0007005,9.84e-08,18;UBERON:0004139,9.84e-08,18;UBERON:0004291,9.84e-08,18;UBERON:0002020,2.31e-07,34|phase1_expression=23.0614339830903,1.04692622291808,0.454999239389536,0.30246421130683,0,1.34303417529512,0.467225281191051,6.84353614240354,1.83025338797167,1.87251621057595,2.22583358693156,2.47293692885543,5.13602189793617,6.03200776691082,2.6648780945253,3.64455481301687,1.39912375625629,5.0473946457318,4.66189074259512,3.81950686618227,18.1992640923289,7.94327609607082,8.8807928307238,0.95995453676044,1.37645568640302,0.57423196411502,0.430761996159075,0.646413698057667,3.04037471130198,2.26827116783938,1.10865255327652,0,0.61506478758457,0,1.1554064790051,0.664938581433969,0.816677425049476,1.67412652294763,2.3440060335714,2.09409497589519,0,2.73218193983378,0.971020706062307,10.9530231638752,12.2666086775613,16.702754446713,8.60630478782843,30.5235218932625,28.1198313900124,50.1629139611651,31.0769856008305,18.6878333674463,3.52343472721246,2.90144856804538,3.36093799142464,48.364773974758,78.5101625432193,63.9433394424028,11.1274053472779,13.7537654610729,12.0427966666174,7.11573517345177,10.6715375533337,9.89889689009539,10.8775299882367,7.8152812644071,15.579205746957,18.4424786554346,8.60623782160365,7.96535036156975,7.99234853135252,32.2785612376298,31.8050698970323,10.779190330916,9.87208351487835,11.0306254393203,29.731287869835,42.0091342300268,37.0191745147547,14.7712642257817,13.8146341839639,9.89735404057844,36.2937898701795,35.4540444319958,29.1844653253707,40.6587447953661,46.6979113021058,24.791126294765,31.5020964266046,53.9580939162449,11.0148505706638,9.46466264679525,2.03991400112325,0,1.29955283489534,0,26.8248842451646,22.8376632254597,16.6263042945836,20.1403557470894,22.2532603247155,24.3820307087204,33.1246811618639,21.3320010945999,13.8554266247177,12.6679932737549,11.62706223534,9.1347103775248,10.0985774622397,12.3206975423805,12.8379141806941,18.8768596553528,15.912469310668,15.5244319769201,16.1096528775916,19.4783216560997,9.88779870937496,25.4494868179045,15.9229899350977,60.9861024301733,48.1434510243658,33.9412677194656,7.45567044872489,35.1336956413857,47.1255090330274,5.36459815938042,5.87094110079009,6.59893004092748,6.60765180779936,39.8443100816828,37.972550033946,27.2669944084916,33.2004451567248,42.1930504595045,25.3501414362663,45.5897949220399,20.5715514977639,22.5176616804268,6.06534620240819,20.8337437327609,11.9710807525687,11.0353010128067,14.0448461248172,24.5648853072216,18.4378912700098,18.1921482804487,20.052169055782,26.6464471861186,11.4251036254406,16.2631228944325,20.4103304030181,29.1530324128675,22.5218271872734,35.521720985261,31.0731025975995,13.1362616100206,5.61770549850588,3.3455227924913,2.27330799516474,14.0845525324141,15.7132460187334,18.5463923304845,20.3600472603281,18.6926020160034,24.2199367233184,35.1126256573116,32.1928081679543,42.1522885945482,50.355314073525,72.0695167307228,73.8536854962746,80.8485930462088,79.2575916200693,95.1523509011036,35.7492912559016,23.5651562348561,1.32167513193519,6.34681359992506,13.0105832826493,10.6828869055802,10.0516619831233,6.45387278794696,8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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:24051
|HGNC=
|MCL_coexpression_id=311
|TSSclassifier=NA
|UniProt=uniprot:F8WIL1,uniprot:P82349,uniprot:Q9CYD9
|association_with_transcript=0bp_to_ENSMUST00000087175,NM_011890,uc008xtb.1_5end
|cluster_id=chr5:74038959..74038993,-
|description=CAGE_peak_1_at_Sgcb_5end
|id=chr5:74038959..74038993,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.63e-13!75;UBERON:0001016!1.63e-13!75;UBERON:0004121!2.80e-13!102;UBERON:0000924!2.80e-13!102;UBERON:0006601!2.80e-13!102;UBERON:0001017!1.34e-12!73;UBERON:0005743!1.34e-12!73;UBERON:0001049!1.79e-10!52;UBERON:0005068!1.79e-10!52;UBERON:0006241!1.79e-10!52;UBERON:0007135!1.79e-10!52;UBERON:0002346!2.22e-10!71;UBERON:0003075!2.22e-10!71;UBERON:0007284!2.22e-10!71;UBERON:0000033!2.71e-10!63;UBERON:0000955!1.07e-09!50;UBERON:0006238!1.07e-09!50;UBERON:0002616!2.63e-09!49;UBERON:0007100!9.85e-08!18;UBERON:0000948!9.85e-08!18;UBERON:0005498!9.85e-08!18;UBERON:0004140!9.85e-08!18;UBERON:0009881!9.85e-08!18;UBERON:0004141!9.85e-08!18;UBERON:0003084!9.85e-08!18;UBERON:0007005!9.85e-08!18;UBERON:0004139!9.85e-08!18;UBERON:0004291!9.85e-08!18;UBERON:0002020!2.31e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.78e-18,92;UBERON:0001016,1.63e-13,75;UBERON:0004121,2.28e-13,95;UBERON:0000924,2.28e-13,95;UBERON:0006601,2.28e-13,95;UBERON:0001017,1.34e-12,73;UBERON:0000073,3.07e-11,54;UBERON:0002346,1.20e-10,64;UBERON:0003075,1.20e-10,64;UBERON:0007284,1.20e-10,64;UBERON:0001049,1.79e-10,52;UBERON:0005068,1.79e-10,52;UBERON:0006241,1.79e-10,52;UBERON:0007135,1.79e-10,52;UBERON:0010371,2.10e-10,73;UBERON:0000955,1.60e-08,47;UBERON:0006238,1.60e-08,47;UBERON:0002616,3.81e-08,46;UBERON:0007100,9.84e-08,18;UBERON:0000948,9.84e-08,18;UBERON:0005498,9.84e-08,18;UBERON:0004140,9.84e-08,18;UBERON:0009881,9.84e-08,18;UBERON:0004141,9.84e-08,18;UBERON:0003084,9.84e-08,18;UBERON:0007005,9.84e-08,18;UBERON:0004139,9.84e-08,18;UBERON:0004291,9.84e-08,18;UBERON:0002020,2.31e-07,34
|phase1_expression=23.0614339830903,1.04692622291808,0.454999239389536,0.30246421130683,0,1.34303417529512,0.467225281191051,6.84353614240354,1.83025338797167,1.87251621057595,2.22583358693156,2.47293692885543,5.13602189793617,6.03200776691082,2.6648780945253,3.64455481301687,1.39912375625629,5.0473946457318,4.66189074259512,3.81950686618227,18.1992640923289,7.94327609607082,8.8807928307238,0.95995453676044,1.37645568640302,0.57423196411502,0.430761996159075,0.646413698057667,3.04037471130198,2.26827116783938,1.10865255327652,0,0.61506478758457,0,1.1554064790051,0.664938581433969,0.816677425049476,1.67412652294763,2.3440060335714,2.09409497589519,0,2.73218193983378,0.971020706062307,10.9530231638752,12.2666086775613,16.702754446713,8.60630478782843,30.5235218932625,28.1198313900124,50.1629139611651,31.0769856008305,18.6878333674463,3.52343472721246,2.90144856804538,3.36093799142464,48.364773974758,78.5101625432193,63.9433394424028,11.1274053472779,13.7537654610729,12.0427966666174,7.11573517345177,10.6715375533337,9.89889689009539,10.8775299882367,7.8152812644071,15.579205746957,18.4424786554346,8.60623782160365,7.96535036156975,7.99234853135252,32.2785612376298,31.8050698970323,10.779190330916,9.87208351487835,11.0306254393203,29.731287869835,42.0091342300268,37.0191745147547,14.7712642257817,13.8146341839639,9.89735404057844,36.2937898701795,35.4540444319958,29.1844653253707,40.6587447953661,46.6979113021058,24.791126294765,31.5020964266046,53.9580939162449,11.0148505706638,9.46466264679525,2.03991400112325,0,1.29955283489534,0,26.8248842451646,22.8376632254597,16.6263042945836,20.1403557470894,22.2532603247155,24.3820307087204,33.1246811618639,21.3320010945999,13.8554266247177,12.6679932737549,11.62706223534,9.1347103775248,10.0985774622397,12.3206975423805,12.8379141806941,18.8768596553528,15.912469310668,15.5244319769201,16.1096528775916,19.4783216560997,9.88779870937496,25.4494868179045,15.9229899350977,60.9861024301733,48.1434510243658,33.9412677194656,7.45567044872489,35.1336956413857,47.1255090330274,5.36459815938042,5.87094110079009,6.59893004092748,6.60765180779936,39.8443100816828,37.972550033946,27.2669944084916,33.2004451567248,42.1930504595045,25.3501414362663,45.5897949220399,20.5715514977639,22.5176616804268,6.06534620240819,20.8337437327609,11.9710807525687,11.0353010128067,14.0448461248172,24.5648853072216,18.4378912700098,18.1921482804487,20.052169055782,26.6464471861186,11.4251036254406,16.2631228944325,20.4103304030181,29.1530324128675,22.5218271872734,35.521720985261,31.0731025975995,13.1362616100206,5.61770549850588,3.3455227924913,2.27330799516474,14.0845525324141,15.7132460187334,18.5463923304845,20.3600472603281,18.6926020160034,24.2199367233184,35.1126256573116,32.1928081679543,42.1522885945482,50.355314073525,72.0695167307228,73.8536854962746,80.8485930462088,79.2575916200693,95.1523509011036,35.7492912559016,23.5651562348561,1.32167513193519,6.34681359992506,13.0105832826493,10.6828869055802,10.0516619831233,6.45387278794696,8.00560957841533,7.98947629672748,10.9141684155238,6.25856027951241,11.5614196048124,10.544693018181,9.35827618171777,7.19055526923377,3.6743468478698,6.17337947088538,11.9490777600441,11.5390997735826,6.76246414038483,12.8300336542548,12.6069116658957,10.4502371636575,12.8370170362242,8.70899873079653,9.73392112616524,11.2291419168838,3.26097889795864,2.66952169145751,2.94838492669805,2.47348323623339,2.63718157805054,2.41177159752417,4.32863948028414,4.60313819921297,3.89124544260085,2.19649130550465,7.18841032636773,4.46569137202204,6.24075346229121,5.30415643688935,4.4849353380478,1.4473305640901,18.2905658264939,11.7484675297701,12.548303186036,14.5980773766662,14.5507953938871,16.0806007144143,19.5195785526531,15.8058254764817,21.438379598442,18.3815692408483,17.3805697836661,19.99132439532,20.3768278601757,19.238324791341,7.53956419696361,7.07077388964322,7.86822836830458,6.34654516500885,37.0871862871799,37.507739709505,17.8689090460576,151.230085395419,19.8770178232242,14.055794794679,20.0343759891503,16.4888470587261,20.2746793414979,21.5138163399513,15.7876173653209,20.4579100537918,24.1125544547379,33.0960955914461,20.4393722699907,21.0117412327361,21.3381916753185,16.6619824202261,5.30980553359851,6.06951590387454,9.37203026590728,10.1846743068185,6.20133975049623,13.2197113615889,12.1461297789064,10.5424781548477,18.1813662976208,10.1131762539461,4.21674434299995,4.12542172992747,22.1285743739962,12.6042765821917,10.9954881215341,13.5032332069903,17.7340233642274,21.0475204770443,28.631529584769,17.3545020995322,4.69343416127421,6.56679419677843,6.3953235435939,14.8397627647332,28.7406679518712,20.2048298509322,17.9058516004705,14.6085400773105,5.24665505933731,40.6081411403016,4.44264290074417,11.7640514739037,10.1856990053341,3.76736914009382,4.64760374251486,5.0331198105435,7.64902934972349,7.13752406850656,10.5031980091362,19.0934123603023,8.38290382990009,14.4356821660063,15.228753055874,17.1452402731864,10.6997656235627,15.3745354878696,15.4561962206378,17.799404054914,8.16574331738295,8.69875038321696,21.4203316699992,11.3632574993424,11.2511773510826,18.4728628926845,13.8201011121172,16.5577002980963,18.7771581833206,17.7077963387772,17.7212292079451,23.1920755992966,38.0199608260382,8.21628913633263,7.70355818102624,6.26536838705446,6.62596197186755,7.51912121803422,6.15912199821921,7.69250876927801,6.94140777720513,7.47151729616292,9.52585083187498,6.65452821903147,6.82205165178267,8.37043022270866,12.8564592399726,49.4272236281161,10.8773117153292,5.74168682300644,9.23365390002431,24.1486992540238,20.64507229963,13.3700685715104,9.64657705855796,3.00943262421218,46.3096510945995,50.6357760157895,43.5400590213941,29.2150409984269,28.773465830367,31.7265436903674,41.851395014372,31.9728054289197,31.7199686288943,31.583379016861,4.67043064128795,13.5668456956351,15.3660245178721,19.2054306483952,9.4325923182592,10.1113929647508,28.0030877030035,32.5535390437453,25.0316983481616,26.5332072351987,29.1501194873776,30.1802146217722,30.246206912772,30.9241486115519,29.7515729190077,29.0539151682675,33.1429172202287,30.2867476128017,32.1427002626579,29.2925851067451,27.7724094432186,31.5906934963621,26.4664170841526,29.7960154096273,28.8915797875065,31.392019527812,28.9026197138981,31.5683653725411,29.7411009322437,30.3016826695179,32.031454893527,31.5214343601803,27.8277109355389,23.7053367014528,27.0069255373598,25.7304895276084,33.218288399248,27.0737528100856,57.386499620653,51.6183920739666,61.9087121106525
|short_description=p1@Sgcb
}}

Revision as of 14:32, 4 August 2015

Short description:p1@Sgcb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sgcb_5end
Coexpression cluster:MCL_coexpression_mm9:311
Association with transcript: 0bp_to_ENSMUST00000087175, NM_011890, uc008xtb.1_5end
EntrezGene:24051
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sgcb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B828.12
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C350.16
Mouse Astrocytes, donor2.CNhs12078.11552-120C431.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C148.36
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E178.51
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C563.94
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C815.58
Mouse Microglia, donor2.CNhs12634.11736-123E818.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.87
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.02
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E535.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F646.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.79
Mouse Schwann, donor1.CNhs12507.11728-123D931.50
Mouse Schwann, donor2.CNhs12573.11746-123F953.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.14
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H910.10
adrenal gland, adult.CNhs10508.49-24D712.32
adrenal gland, embryo E14.CNhs11038.406-44C512.84
adrenal gland, embryo E16.CNhs11004.1254-43D618.88
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F515.52
adrenal gland, neonate N00.CNhs11191.1311-23C116.11
adrenal gland, neonate N25.CNhs11223.1377-27I319.48
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H125.45
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F560.99
bone (os femoris), neonate N16.CNhs11225.1525-43A648.14
bone (os femoris), neonate N20.CNhs11195.1350-25C333.94
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B235.13
cerebellum, neonate N30.CNhs11135.1395-42I247.13
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.61
corpora quadrigemina, adult.CNhs10501.16-22A439.84
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F127.27
cortex, adult.CNhs10473.12-14D533.20
cortex, neonate N30.CNhs11107.1392-42F242.19
diencephalon, adult.CNhs10482.20-12F225.35
diencephalon, neonate N30.CNhs11201.1388-42B245.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.52
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G420.83
eyeball, embryo E12.CNhs11016.345-16C611.97
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C914.04
eyeball, embryo E17.CNhs11023.1261-18D424.56
eyeball, neonate N00.CNhs11207.633-15C618.44
eyeball, neonate N01.CNhs11140.1532-43E718.19
eyeball, neonate N02.CNhs11205.1551-44G820.05
eyeball, neonate N16.CNhs11188.777-19A226.65
forelimb, embryo E11.CNhs10596.335-25E211.43
forelimb, embryo E12.CNhs10600.359-14H216.26
forelimb, embryo E13.CNhs10589.384-1E220.41
forelimb, embryo E14.CNhs10577.413-26A829.15
forelimb, embryo E15.CNhs11007.437-20E722.52
forelimb, embryo E17.CNhs10598.1517-43C435.52
forelimb, embryo E18.CNhs11008.1520-43B531.07
gonad, embryo E13.CNhs11044.1564-45I613.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E914.08
heart, embryo E12.CNhs11015.353-12F515.71
heart, embryo E13.CNhs11013.376-3I918.55
heart, embryo E14.CNhs10597.403-26D420.36
heart, embryo E15.CNhs11017.431-16C818.69
heart, embryo E16.CNhs11021.457-17C624.22
heart, embryo E17.CNhs11025.479-18E535.11
heart, embryo E18.CNhs11030.1283-20G332.19
heart, neonate N00.CNhs11213.639-21E342.15
heart, neonate N03.CNhs11221.1349-25I250.36
heart, neonate N10.CNhs11118.749-24G172.07
heart, neonate N16.CNhs11209.782-15G173.85
heart, neonate N20.CNhs11127.821-26I680.85
heart, neonate N25.CNhs11196.1351-25D379.26
heart, neonate N30.CNhs11202.1390-42D295.15
hippocampus, adult.CNhs10478.13-16E835.75
hippocampus, neonate N00.CNhs11228.627-43G123.57
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I513.01
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D810.05
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F210.54
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I911.95
kidney, embryo E15.CNhs10997.434-16F811.54
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I212.83
kidney, embryo E18.CNhs11001.1288-20C712.61
kidney, neonate N00.CNhs11214.646-21G710.45
kidney, neonate N10.CNhs11206.758-6D512.84
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H111.23
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B118.29
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F812.55
lung, embryo E15.CNhs11020.432-17C514.60
lung, embryo E16.CNhs10998.458-17B614.55
lung, embryo E17.CNhs10605.480-44A616.08
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C615.81
lung, neonate N06.CNhs11212.683-20E521.44
lung, neonate N07.CNhs11111.715-19A318.38
lung, neonate N10.CNhs11219.750-23E617.38
lung, neonate N20.CNhs11109.822-18A419.99
lung, neonate N25.CNhs11119.1359-25C720.38
lung, neonate N30.CNhs11133.1394-42H219.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C237.09
medulla oblongata, neonate N30.CNhs11200.1396-42A337.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2151.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.49
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.11
olfactory brain, adult.CNhs10489.18-22I933.10
ovary, adult.CNhs10507.91-2I720.44
ovary, embryo E18.CNhs11040.505-44H721.01
ovary, neonate N00.CNhs11217.1299-22I421.34
oviduct, adult pregnant day01.CNhs10500.988-6G616.66
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E510.18
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G912.15
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D818.18
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G822.13
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C711.00
pituitary gland, embryo E14.CNhs11037.398-44A513.50
pituitary gland, embryo E15.CNhs10592.427-16B917.73
pituitary gland, embryo E16.CNhs11036.449-43F621.05
pituitary gland, embryo E17.CNhs11039.1265-44F528.63
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C314.84
skin, neonate N00.CNhs11124.650-25G428.74
skin, neonate N03.CNhs11215.662-22H320.20
skin, neonate N06.CNhs11097.693-20I517.91
skin, neonate N10.CNhs11108.762-6C414.61
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C940.61
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C111.76
spleen, embryo E18.CNhs11011.1271-21F210.19
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H14.65
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.50
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E38.38
stomach, embryo E15.CNhs10603.1252-16G814.44
stomach, embryo E16.CNhs11022.459-17D415.23
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C610.70
stomach, neonate N03.CNhs11193.1340-24B815.37
stomach, neonate N07.CNhs11210.718-18A915.46
stomach, neonate N25.CNhs11104.1355-25E417.80
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F511.36
testis, embryo E15.CNhs11034.443-27C511.25
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I513.82
testis, embryo E18.CNhs11027.503-18G516.56
testis, neonate N00.CNhs11189.1300-22B718.78
testis, neonate N07.CNhs11222.726-26I417.71
testis, neonate N10.CNhs11204.763-44D917.72
testis, neonate N20.CNhs11110.839-18H323.19
testis, neonate N30.CNhs11130.1391-42E238.02
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C76.94
thymus, neonate N06.CNhs11197.681-26C47.47
thymus, neonate N07.CNhs11211.713-19D39.53
thymus, neonate N10.CNhs11194.748-24E46.65
thymus, neonate N20.CNhs11186.820-7A26.82
thymus, neonate N25.CNhs11125.1362-25G78.37
thymus, neonate N30.CNhs11132.1393-42G212.86
tongue, adult.CNhs10499.32-1B449.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.23
urinary bladder, adult.CNhs10481.879-12E424.15
uterus, adult pregnant day19.CNhs10497.590-15F520.65
uterus, adult.CNhs10509.92-27E513.37
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.31
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A343.54
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H215.37
whole body, embryo E14.5.CNhs10578.420-27D219.21
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G533.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.29
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.59
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G526.47
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G531.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G529.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.71
whole body, embryo E17.5.CNhs10513.490-9F927.01
whole body, embryo E17.CNhs10517.475-3I525.73
whole body, embryo E18.CNhs10516.493-3B333.22
whole body, neonate N00.CNhs10525.657-19C227.07
whole body, neonate N01.CNhs10576.659-23C657.39
whole body, neonate N06.CNhs10515.692-21D151.62
whole body, neonate N10.CNhs10518.761-6B461.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.78e-1892
nervous system1.63e-1375
ectoderm-derived structure2.28e-1395
ectoderm2.28e-1395
presumptive ectoderm2.28e-1395
central nervous system1.34e-1273
regional part of nervous system3.07e-1154
neurectoderm1.20e-1064
neural plate1.20e-1064
presumptive neural plate1.20e-1064
neural tube1.79e-1052
neural rod1.79e-1052
future spinal cord1.79e-1052
neural keel1.79e-1052
ecto-epithelium2.10e-1073
brain1.60e-0847
future brain1.60e-0847
regional part of brain3.81e-0846
primary circulatory organ9.84e-0818
heart9.84e-0818
primitive heart tube9.84e-0818
primary heart field9.84e-0818
anterior lateral plate mesoderm9.84e-0818
heart tube9.84e-0818
heart primordium9.84e-0818
cardiac mesoderm9.84e-0818
cardiogenic plate9.84e-0818
heart rudiment9.84e-0818
gray matter2.31e-0734
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