FFCP PHASE1:Hg19::chrX:70752945..70752965,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8127 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000488174_5end | |||
|description=CAGE_peak_1_at_OGT_5end | |||
|id=chrX:70752945..70752965,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.40e-23!172;CL:0000566!6.40e-23!172;CL:0000738!3.66e-22!140;CL:0000988!6.60e-21!182;CL:0002087!7.92e-21!119;CL:0002032!4.00e-20!165;CL:0000837!4.00e-20!165;CL:0002031!2.90e-19!124;CL:0000838!3.77e-15!52;CL:0000542!5.07e-15!53;CL:0000051!5.07e-15!53;CL:0000860!8.83e-12!45;CL:0002057!1.42e-10!42;CL:0000791!1.61e-09!18;CL:0000789!1.61e-09!18;CL:0002420!1.61e-09!18;CL:0002419!1.61e-09!18;CL:0000790!1.61e-09!18;CL:0000084!9.49e-09!25;CL:0000827!9.49e-09!25;CL:0000763!1.23e-07!112;CL:0000049!1.23e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.18e-11;33!CL:0002057;5.18e-11;33!CL:0000791;1.60e-09;18!CL:0000789;1.60e-09;18!CL:0002419;1.60e-09;18!CL:0000542;7.75e-09;53!CL:0000084;9.68e-09;25!CL:0002087;1.27e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.58e-22,168;CL:0000738,3.71e-21,136;CL:0000988,1.72e-20,177;CL:0002087,7.73e-20,115;CL:0002032,3.72e-19,161;CL:0000837,3.72e-19,161;CL:0002031,2.69e-18,120;CL:0000838,3.77e-15,52;CL:0000542,5.07e-15,53;CL:0000051,5.07e-15,53;CL:0000860,1.42e-10,42;CL:0002057,1.42e-10,42;CL:0000791,1.61e-09,18;CL:0000789,1.61e-09,18;CL:0002420,1.61e-09,18;CL:0002419,1.61e-09,18;CL:0000790,1.61e-09,18;CL:0000084,9.49e-09,25;CL:0000827,9.49e-09,25;CL:0000473,3.49e-07,48;CL:0000234,3.49e-07,48;CL:0000763,6.13e-07,108;CL:0000049,6.13e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;1.60e-09;18!CL:0000051;7.75e-09;53!CL:0002057;6.18e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.41e-11!115;UBERON:0002390!2.87e-10!102;UBERON:0003061!2.87e-10!102;UBERON:0002780!1.52e-09!41;UBERON:0001890!1.52e-09!41;UBERON:0006240!1.52e-09!41;UBERON:0003080!1.80e-09!42;UBERON:0001049!2.00e-09!57;UBERON:0005068!2.00e-09!57;UBERON:0006241!2.00e-09!57;UBERON:0007135!2.00e-09!57;UBERON:0002193!4.01e-08!112;UBERON:0002020!4.92e-08!34;UBERON:0003528!4.92e-08!34;UBERON:0002791!6.52e-08!33;UBERON:0001893!6.53e-08!34;UBERON:0001869!9.25e-08!32;UBERON:0002619!1.10e-07!22;UBERON:0002616!2.02e-07!59;UBERON:0001950!3.64e-07!20;UBERON:0001017!4.83e-07!82;UBERON:0000955!6.76e-07!69;UBERON:0006238!6.76e-07!69;UBERON:0000073!8.10e-07!94;UBERON:0001016!8.10e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.04e-07;22!UBERON:0002791;2.90e-07;32!UBERON:0002780;3.40e-07;41!UBERON:0001890;3.40e-07;41!UBERON:0001950;3.45e-07;20!UBERON:0003528;4.01e-07;34!UBERON:0002020;4.01e-07;34!UBERON:0001869;4.03e-07;32!UBERON:0001893;6.44e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.59e-11,114;UBERON:0002780,1.52e-09,41;UBERON:0001890,1.52e-09,41;UBERON:0003080,1.52e-09,41;UBERON:0006240,1.52e-09,41;UBERON:0001049,1.83e-09,56;UBERON:0005068,1.83e-09,56;UBERON:0006241,1.83e-09,56;UBERON:0007135,1.83e-09,56;UBERON:0002390,1.84e-09,98;UBERON:0003061,1.84e-09,98;UBERON:0000073,6.86e-09,53;UBERON:0002616,6.86e-09,53;UBERON:0003528,4.92e-08,34;UBERON:0002020,4.92e-08,34;UBERON:0002791,5.51e-08,32;UBERON:0001893,6.53e-08,34;UBERON:0001869,9.25e-08,32;UBERON:0002619,1.10e-07,22;UBERON:0001016,1.49e-07,89;UBERON:0002193,2.09e-07,108;UBERON:0001950,3.64e-07,20;UBERON:0001017,4.88e-07,81;UBERON:0000955,6.73e-07,68;UBERON:0006238,6.73e-07,68 | |||
|phase1_expression=53.4134435055436,61.8750514044941,76.3972870200164,31.0227224894704,40.2264984984559,38.3828950604162,7.59899634504932,25.2687949370732,23.7678921661853,9.82935746006035,6.28021051175185,45.2173640309457,27.4317657357592,22.7730089446486,17.8954582893075,43.7011345193654,33.1481990413187,43.088295332855,25.8604383358969,26.9635117188166,24.8880843317989,31.972381590765,42.0766901082653,44.2104392985416,52.6023659902224,139.683705707255,114.366121103774,129.085681354434,55.8577273125444,139.713900907385,56.8175172569999,18.3884244895785,21.9880320708123,35.1266309658448,103.341245574122,91.9834934193617,83.6761252104315,65.3714582067615,117.318501770033,100.042011400008,60.4571780447796,80.9734165047449,58.4696538529603,85.494164402384,104.6716364018,106.736986922639,113.890228083785,160.355476328512,190.159711729594,128.886191760323,159.58812016763,153.004002737915,166.856909476523,214.30091494983,235.642086674155,94.1211697713023,126.901359776898,115.283147520328,152.429778400709,220.799170628352,236.554736545645,70.918029540144,84.5725908315719,73.7368818421561,165.99968449555,220.712852404853,249.12889959823,145.975474514168,149.665597586598,153.335324361812,150.139076653075,257.05778991932,239.87848968019,77.5306900764826,67.3955630889188,52.2050027315856,102.106725712164,85.9011827053416,171.654926592482,59.5676634419209,90.7060048027851,57.1738801283304,89.7580846752746,109.227722252426,114.746693748399,80.6520120650699,105.304144590471,118.399002630624,109.733448882287,76.3243003628291,188.978705744337,183.805240273104,187.313881781362,101.77192300585,104.815101277547,65.8460211937693,167.400014366872,181.177961627365,166.126011191603,259.139067855551,161.331521983627,182.277405207872,220.15420310094,206.332166151341,173.817485410154,184.75926808274,365.585216082771,142.693730174402,153.860208163336,169.042165932579,175.205911276228,271.545491333744,241.410524827834,301.250972429017,274.928427607089,191.719407844282,158.270063857593,172.157350186798,392.433542322249,171.06962749204,147.144860571551,149.220970978395,161.416527651372,214.761533517114,183.648168031948,178.293270789145,115.779047565868,152.616304621122,166.347801777342,172.920338236062,58.5136479153508,29.51083782696,13.6812941172577,31.8066454098418,30.0802746381534,38.6740205625399,46.9218708760149,42.823868586632,56.9099599327688,58.5365609301169,51.7346887732512,75.640416099929,8.01449634243593,12.977455497455,47.3839194735838,55.5473861984662,56.3741752599988,307.891395978196,294.005384140986,400.802643934601,30.8081731418393,21.5058648776531,35.7554716655822,26.0041653285044,33.5599548967925,26.4113320262465,26.7513557167118,55.818019980575,53.3649394030065,68.2830050039927,27.7952228805311,26.6095237001479,36.1211845171291,32.3543510704364,25.9245423322163,64.2958043645374,44.0077570347293,28.7159275232472,24.5306619945413,30.3765011061801,28.0298668213523,56.6655794975072,58.1670396222488,10.4662572514208,82.4973439814229,58.6299269007004,267.996181965955,320.683341997174,57.8109462983322,33.6406560085384,30.9572087616144,25.4067574869675,65.9767395047505,68.5677320834712,39.2308567472301,71.2893484207627,48.9749535807999,29.2901789792246,35.8984088354869,26.8121756125891,32.1314663186372,56.6034283462947,43.058203201923,36.9385621626914,58.5922471501544,45.4486974053541,88.4468686864552,38.0160914330257,49.7006527849899,20.9337113245746,15.8095991199572,42.2523646024706,59.431296939183,58.4605283671626,41.2638963627988,53.6353642648284,33.6533251950777,13.9521585286826,161.091892848598,82.2195946951485,70.3613911849745,122.137076106352,89.0373852620112,266.142677867135,64.3964322907301,137.552710776632,59.7288841638148,192.102102199771,98.3092917499757,129.963429682325,147.683990486912,48.2602550510397,33.5729972774766,28.9891279744945,34.9115034356268,32.1221146835684,67.4514594896662,65.6022353191352,59.4912987491934,52.1415106727313,52.7350578330063,82.8498605102134,29.725411142665,37.3079744151873,30.3896826975457,63.6184061403811,24.5439023767659,45.3115044152602,47.3722979119466,38.5617647813571,44.5587649838872,46.4083215916825,47.4541238222193,37.2134410522054,47.6818160254591,38.8594628515854,27.311751821112,16.8290128564135,16.462960453256,13.2307840246988,53.237114625169,56.0211513506247,70.8947888017685,165.107199181079,66.4137568132813,26.5930105962715,28.7545747770599,14.6122279234905,30.0581627510776,36.6650242827777,15.6387986548956,11.4392826380754,41.8560891873293,32.3445829880464,27.3562257569464,28.0070908656483,17.5934494779112,31.0114268142395,31.608175918371,33.4809603217,42.5955420531197,34.1646227103287,37.4550528967595,13.1227367581488,53.2503346390385,42.6743042699583,25.5241789703118,29.9352956669381,26.0700221832344,1429.70871637403,52.9171088419489,58.0518723514162,59.0891809009542,53.148064472506,30.796478731702,34.7609467258033,43.3704554677174,25.6608669034058,35.8867949534599,36.341509999114,67.1692116681859,38.3488308461134,48.3915676404941,30.2153737582314,71.2287153825356,2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| |||
|short_description=p1@OGT | |||
}} |
Revision as of 06:01, 23 January 2014
Short description: | p1@OGT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OGT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000488174_5end |
EntrezGene: | OGT |
HGNC: | 8127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.58e-22 | 168 |
leukocyte | 3.71e-21 | 136 |
hematopoietic cell | 1.72e-20 | 177 |
nongranular leukocyte | 7.73e-20 | 115 |
hematopoietic oligopotent progenitor cell | 3.72e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.72e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 2.69e-18 | 120 |
lymphoid lineage restricted progenitor cell | 3.77e-15 | 52 |
lymphocyte | 5.07e-15 | 53 |
common lymphoid progenitor | 5.07e-15 | 53 |
classical monocyte | 1.42e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-10 | 42 |
mature alpha-beta T cell | 1.61e-09 | 18 |
alpha-beta T cell | 1.61e-09 | 18 |
immature T cell | 1.61e-09 | 18 |
mature T cell | 1.61e-09 | 18 |
immature alpha-beta T cell | 1.61e-09 | 18 |
T cell | 9.49e-09 | 25 |
pro-T cell | 9.49e-09 | 25 |
defensive cell | 3.49e-07 | 48 |
phagocyte | 3.49e-07 | 48 |
myeloid cell | 6.13e-07 | 108 |
common myeloid progenitor | 6.13e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.59e-11 | 114 |
regional part of forebrain | 1.52e-09 | 41 |
forebrain | 1.52e-09 | 41 |
anterior neural tube | 1.52e-09 | 41 |
future forebrain | 1.52e-09 | 41 |
neural tube | 1.83e-09 | 56 |
neural rod | 1.83e-09 | 56 |
future spinal cord | 1.83e-09 | 56 |
neural keel | 1.83e-09 | 56 |
hematopoietic system | 1.84e-09 | 98 |
blood island | 1.84e-09 | 98 |
regional part of nervous system | 6.86e-09 | 53 |
regional part of brain | 6.86e-09 | 53 |
brain grey matter | 4.92e-08 | 34 |
gray matter | 4.92e-08 | 34 |
regional part of telencephalon | 5.51e-08 | 32 |
telencephalon | 6.53e-08 | 34 |
cerebral hemisphere | 9.25e-08 | 32 |
regional part of cerebral cortex | 1.10e-07 | 22 |
nervous system | 1.49e-07 | 89 |
hemolymphoid system | 2.09e-07 | 108 |
neocortex | 3.64e-07 | 20 |
central nervous system | 4.88e-07 | 81 |
brain | 6.73e-07 | 68 |
future brain | 6.73e-07 | 68 |