FFCP PHASE1:Hg19::chr5:57787254..57787271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=202309 | |EntrezGene=entrezgene:202309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26588 | |HGNC=HGNC:26588 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q8N292,D6RA63,D6RBK7 | |UniProt=uniprot:Q8N292,uniprot:D6RA63,uniprot:D6RBK7 | ||
|association_with_transcript=0bp_to_ENST00000396776,ENST00000502276,ENST00000511930_5end | |association_with_transcript=0bp_to_ENST00000396776,ENST00000502276,ENST00000511930_5end | ||
|cluster_id=chr5:57787254..57787271,+ | |||
|description=CAGE_peak_2_at_GAPT_5end | |description=CAGE_peak_2_at_GAPT_5end | ||
|id=chr5:57787254..57787271,+ | |id=chr5:57787254..57787271,+ | ||
Revision as of 15:26, 30 July 2015
| Short description: | p2@GAPT |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_GAPT_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000396776, ENST00000502276, ENST00000511930_5end |
| EntrezGene: | 202309 |
| HGNC: | 26588 |
| UniProt: | Q8N292D6RA63D6RBK7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@GAPT |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid cell | 6.81e-94 | 108 |
| common myeloid progenitor | 6.81e-94 | 108 |
| hematopoietic stem cell | 2.19e-89 | 168 |
| hematopoietic cell | 1.94e-83 | 177 |
| hematopoietic oligopotent progenitor cell | 4.54e-82 | 161 |
| hematopoietic multipotent progenitor cell | 4.54e-82 | 161 |
| myeloid leukocyte | 8.22e-79 | 72 |
| myeloid lineage restricted progenitor cell | 9.00e-70 | 66 |
| leukocyte | 1.06e-64 | 136 |
| granulocyte monocyte progenitor cell | 2.00e-63 | 67 |
Showing 1 to 10 of 36 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.05e-67 | 98 |
| blood island | 4.05e-67 | 98 |
| hemolymphoid system | 1.42e-62 | 108 |
| bone marrow | 2.69e-56 | 76 |
| immune system | 2.02e-51 | 93 |
| bone element | 6.56e-51 | 82 |
| skeletal element | 7.58e-45 | 90 |
| skeletal system | 1.22e-38 | 100 |
| connective tissue | 2.48e-25 | 371 |
| lateral plate mesoderm | 1.08e-22 | 203 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 1.21e-22 | 31 |
| leukemia | 3.36e-18 | 39 |
| hematologic cancer | 1.81e-13 | 51 |
| immune system cancer | 1.81e-13 | 51 |
Showing 1 to 4 of 4 entries
