FF:10060-101H6: Difference between revisions

Revision as of 18:09, 9 July 2012

Name:	thyroid, fetal, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	thyroid
dev stage	36 weeks fetus
sex	male
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Biochain
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	A811069
catalog number	Cat:RtHFN: Thyroid
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.384
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.215
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.0799
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0.206
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.147
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0.0799
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.341
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0799
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.107
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.535
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.18
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.322
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0799
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0799
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.147
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0.0799
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.285
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.186
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.418
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0799
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.338
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0799
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.345
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.206
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0799
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.147
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0817
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0799
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.417
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.00345
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.257
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.257
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.703
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.0799
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0.958
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0799
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.0799
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0.206
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0799
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.45
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0.147
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11769

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	3.9344e-4
MA0003.1	MA0003.1	0.245
MA0004.1	MA0004.1	0.0484
MA0006.1	MA0006.1	0.91
MA0007.1	MA0007.1	0.244
MA0009.1	MA0009.1	0.966
MA0014.1	MA0014.1	0.868
MA0017.1	MA0017.1	0.0651
MA0018.2	MA0018.2	0.0136
MA0019.1	MA0019.1	0.483
MA0024.1	MA0024.1	0.67
MA0025.1	MA0025.1	0.436
MA0027.1	MA0027.1	0.72
MA0028.1	MA0028.1	0.0886
MA0029.1	MA0029.1	0.215
MA0030.1	MA0030.1	0.991
MA0031.1	MA0031.1	0.369
MA0035.2	MA0035.2	0.00304
MA0038.1	MA0038.1	0.591
MA0039.2	MA0039.2	0.275
MA0040.1	MA0040.1	0.335
MA0041.1	MA0041.1	0.447
MA0042.1	MA0042.1	0.935
MA0043.1	MA0043.1	0.571
MA0046.1	MA0046.1	0.0726
MA0047.2	MA0047.2	0.806
MA0048.1	MA0048.1	0.648
MA0050.1	MA0050.1	0.0725
MA0051.1	MA0051.1	0.0523
MA0052.1	MA0052.1	8.73658e-5
MA0055.1	MA0055.1	0.543
MA0057.1	MA0057.1	0.926
MA0058.1	MA0058.1	0.05
MA0059.1	MA0059.1	0.0105
MA0060.1	MA0060.1	0.0966
MA0061.1	MA0061.1	1.19728e-4
MA0062.2	MA0062.2	0.00321
MA0065.2	MA0065.2	0.00244
MA0066.1	MA0066.1	0.0128
MA0067.1	MA0067.1	0.208
MA0068.1	MA0068.1	0.999
MA0069.1	MA0069.1	0.318
MA0070.1	MA0070.1	0.992
MA0071.1	MA0071.1	0.551
MA0072.1	MA0072.1	0.196
MA0073.1	MA0073.1	0.515
MA0074.1	MA0074.1	0.684
MA0076.1	MA0076.1	0.118
MA0077.1	MA0077.1	0.995
MA0078.1	MA0078.1	0.216
MA0079.2	MA0079.2	0.533
MA0080.2	MA0080.2	7.43616e-9
MA0081.1	MA0081.1	0.0388
MA0083.1	MA0083.1	0.708
MA0084.1	MA0084.1	0.436
MA0087.1	MA0087.1	0.971
MA0088.1	MA0088.1	0.0289
MA0090.1	MA0090.1	0.366
MA0091.1	MA0091.1	0.0969
MA0092.1	MA0092.1	0.21
MA0093.1	MA0093.1	0.0582
MA0099.2	MA0099.2	1.01314e-23
MA0100.1	MA0100.1	0.522
MA0101.1	MA0101.1	4.5531e-4
MA0102.2	MA0102.2	0.00332
MA0103.1	MA0103.1	0.526
MA0104.2	MA0104.2	0.00242
MA0105.1	MA0105.1	6.31508e-9
MA0106.1	MA0106.1	0.0198
MA0107.1	MA0107.1	1.56794e-4
MA0108.2	MA0108.2	0.00102
MA0111.1	MA0111.1	0.617
MA0112.2	MA0112.2	0.0058
MA0113.1	MA0113.1	0.743
MA0114.1	MA0114.1	0.0509
MA0115.1	MA0115.1	0.187
MA0116.1	MA0116.1	4.20357e-5
MA0117.1	MA0117.1	0.517
MA0119.1	MA0119.1	0.968
MA0122.1	MA0122.1	0.665
MA0124.1	MA0124.1	0.336
MA0125.1	MA0125.1	0.733
MA0131.1	MA0131.1	0.631
MA0135.1	MA0135.1	0.328
MA0136.1	MA0136.1	1.14266e-10
MA0137.2	MA0137.2	0.221
MA0138.2	MA0138.2	0.58
MA0139.1	MA0139.1	0.118
MA0140.1	MA0140.1	0.00167
MA0141.1	MA0141.1	0.153
MA0142.1	MA0142.1	0.0121
MA0143.1	MA0143.1	0.119
MA0144.1	MA0144.1	0.288
MA0145.1	MA0145.1	0.564
MA0146.1	MA0146.1	0.189
MA0147.1	MA0147.1	0.00127
MA0148.1	MA0148.1	0.781
MA0149.1	MA0149.1	0.158
MA0150.1	MA0150.1	3.30756e-6
MA0152.1	MA0152.1	0.138
MA0153.1	MA0153.1	0.91
MA0154.1	MA0154.1	9.71459e-4
MA0155.1	MA0155.1	0.835
MA0156.1	MA0156.1	1.73342e-7
MA0157.1	MA0157.1	0.291
MA0159.1	MA0159.1	0.0513
MA0160.1	MA0160.1	0.07
MA0162.1	MA0162.1	0.213
MA0163.1	MA0163.1	8.03937e-9
MA0164.1	MA0164.1	0.446
MA0258.1	MA0258.1	0.0503
MA0259.1	MA0259.1	0.164

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11769

Novel motif	Logo	P-value
1	1	0.118
10	10	0.12
100	100	0.72
101	101	0.853
102	102	0.808
103	103	0.00932
104	104	0.53
105	105	0.94
106	106	0.128
107	107	0.533
108	108	0.946
109	109	0.00159
11	11	0.0385
110	110	0.141
111	111	0.476
112	112	0.955
113	113	0.0479
114	114	0.0562
115	115	0.998
116	116	0.991
117	117	0.0327
118	118	0.162
119	119	0.549
12	12	0.493
120	120	0.189
121	121	0.917
122	122	0.242
123	123	0.23
124	124	0.31
125	125	0.486
126	126	0.522
127	127	0.19
128	128	0.433
129	129	0.533
13	13	0.332
130	130	0.159
131	131	0.734
132	132	0.05
133	133	0.397
134	134	0.855
135	135	0.839
136	136	0.318
137	137	0.275
138	138	0.775
139	139	0.611
14	14	0.916
140	140	0.6
141	141	0.928
142	142	0.151
143	143	0.00699
144	144	0.709
145	145	0.652
146	146	0.156
147	147	0.774
148	148	0.101
149	149	0.666
15	15	0.121
150	150	0.258
151	151	0.53
152	152	0.597
153	153	0.953
154	154	0.833
155	155	0.474
156	156	0.742
157	157	0.441
158	158	0.295
159	159	0.126
16	16	0.136
160	160	0.354
161	161	0.42
162	162	0.619
163	163	0.0305
164	164	0.953
165	165	0.988
166	166	0.979
167	167	0.287
168	168	0.397
169	169	0.0476
17	17	0.0812
18	18	0.00334
19	19	0.575
2	2	0.968
20	20	0.55
21	21	0.706
22	22	0.211
23	23	0.232
24	24	0.116
25	25	0.585
26	26	0.0788
27	27	0.169
28	28	0.675
29	29	0.073
3	3	0.116
30	30	0.507
31	31	0.534
32	32	0.977
33	33	0.275
34	34	0.799
35	35	0.272
36	36	0.0303
37	37	0.0727
38	38	0.408
39	39	0.734
4	4	0.471
40	40	0.0742
41	41	0.0634
42	42	0.128
43	43	0.0378
44	44	0.652
45	45	0.646
46	46	0.0457
47	47	0.0463
48	48	0.0998
49	49	0.106
5	5	0.333
50	50	0.933
51	51	0.28
52	52	0.719
53	53	0.938
54	54	0.285
55	55	0.706
56	56	0.244
57	57	0.613
58	58	0.547
59	59	0.0956
6	6	0.8
60	60	0.437
61	61	0.217
62	62	0.159
63	63	0.584
64	64	0.143
65	65	0.258
66	66	0.0382
67	67	0.66
68	68	0.949
69	69	0.804
7	7	0.585
70	70	0.0562
71	71	0.0414
72	72	0.1
73	73	0.182
74	74	0.692
75	75	0.053
76	76	0.648
77	77	0.341
78	78	0.636
79	79	0.938
8	8	0.0648
80	80	0.118
81	81	0.29
82	82	0.527
83	83	0.349
84	84	0.851
85	85	0.442
86	86	0.252
87	87	1.45721e-4
88	88	0.91
89	89	0.398
9	9	0.201
90	90	0.201
91	91	0.378
92	92	0.818
93	93	0.815
94	94	0.0437
95	95	0.0104
96	96	0.319
97	97	0.884
98	98	0.71
99	99	0.79

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11769

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010060 human thyroid - fetal sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002046 (thyroid gland)
0000479 (tissue)
0004119 (endoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0000949 (endocrine system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010060 (human thyroid - fetal sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0007123 (pharyngeal pouch 2)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!2.63!430.31!PAX8;;chr9:100615499..100615519,+!p1@FOXE1!2.40!252.04!FOXE1;;chr4:57547454..57547469,-!p1@HOPX!2.14!137.44!HOPX;;chr12:52437488..52437507,+!p2@NR4A1!2.01!101.06!NR4A1;;chr10:94449703..94449718,+!p1@HHEX!1.99!359.57!HHEX;;chr6:19837592..19837621,+!p1@ID4!1.98!543.70!ID4;;chr12:52445218..52445237,+!p1@NR4A1!1.91!955.81!NR4A1;;chr2:122042770..122042785,-!p1@TFCP2L1!1.81!64.07!TFCP2L1;;chr1:214161272..214161322,+!p1@PROX1!1.77!81.05!PROX1;;chr20:62680984..62680999,-!p1@SOX18!1.77!75.59!SOX18;;chr9:102584159..102584174,+!p2@NR4A3!1.72!91.56!NR4A3;;chr19:54041669..54041697,+!p2@ZNF331!1.65!43.25!ZNF331;;chr17:53342311..53342400,+!p1@HLF!1.63!47.50!HLF;;chr8:25902876..25902936,-!p1@EBF2!1.61!39.82!EBF2;;chr2:157189180..157189290,-!p1@NR4A2!1.59!188.58!NR4A2;;chr19:54058073..54058088,+!p1@ZNF331!1.55!34.36!ZNF331;;chr1:40105299..40105326,-!p1@HEYL!1.54!33.35!HEYL;;chr11:113930425..113930471,+!p1@ZBTB16!1.53!46.89!ZBTB16;;chr20:50179368..50179392,-!p2@NFATC2!1.53!41.84!NFATC2;;chr1:151804244..151804310,-!p1@RORC!1.46!28.09!RORC;;chr2:85981107..85981120,+!p3@ATOH8!1.46!27.69!ATOH8;;chr8:102504651..102504683,+!p1@GRHL2!1.46!27.69!GRHL2;;chr7:137686763..137686784,-!p5@CREB3L2!1.39!40.22!CREB3L2;;chr21:39870339..39870443,-!p1@ERG!1.39!23.65!ERG;;chr14:36990416..36990438,-!p4@NKX2-1!1.39!23.45!NKX2-1;;chr16:79634624..79634642,-!p1@MAF!1.38!88.53!MAF;;chr12:115122005..115122016,-!p3@TBX3!1.38!27.08!TBX3;;chr3:114819124..114819200,-!p3@ZBTB20!1.33!46.89!ZBTB20;;chr17:80797886..80797906,-!p1@ZNF750!1.33!20.41!ZNF750;;chrY:21906594..21906622,-!p1@KDM5D!1.33!20.41!KDM5D;;chr2:95963052..95963106,+!p1@KCNIP3!1.32!20.01!KCNIP3;;chr19:45971246..45971265,+!p1@FOSB!1.30!339.96!FOSB;;chr11:128457446..128457461,-!p4@ETS1!1.30!18.80!ETS1;;chr1:209979467..209979494,-!p1@IRF6!1.29!20.82!IRF6;;chr18:45935720..45935772,-!p1@ZBTB7C!1.29!18.59!ZBTB7C;;chr8:22550982..22550999,-!p1@EGR3!1.28!50.73!EGR3;;chr5:158526917..158526932,-!p1@EBF1!1.28!44.87!EBF1;;chr10:131762504..131762555,-!p1@EBF3!1.28!18.19!EBF3;;chr8:10588010..10588030,-!p1@SOX7!1.28!17.99!SOX7;;chr9:4300050..4300118,-!p1@GLIS3!1.27!111.16!GLIS3;;chr10:64576105..64576133,-!p1@EGR2!1.26!34.97!EGR2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.26!17.18!PEG3;;chr1:61548225..61548299,+!p1@NFIA!1.25!216.47!NFIA;;chr5:137804484..137804498,+!p2@EGR1!1.25!66.09!EGR1;;chr1:170632285..170632309,+!p1@PRRX1!1.25!19.20!PRRX1;;chr18:77155922..77155939,+!p1@NFATC1!1.24!44.67!NFATC1;;chr2:85981073..85981091,+!p5@ATOH8!1.24!16.37!ATOH8;;chr9:4299979..4299996,-!p3@GLIS3!1.23!25.67!GLIS3;;chr8:106330656..106330684,+!p1@ZFPM2!1.22!40.42!ZFPM2;;chr20:2673383..2673441,+!p1@EBF4!1.20!23.24!EBF4;;chr6:106546808..106546833,+!p3@PRDM1!1.19!18.19!PRDM1;;chr11:125034640..125034655,+!p1@PKNOX2!1.19!14.55!PKNOX2;;chr12:54785074..54785122,-!p2@ZNF385A!1.18!21.83!ZNF385A;;chr12:96588368..96588394,+!p3@ELK3!1.17!36.79!ELK3;;chr15:42749722..42749739,-!p2@ZFP106!1.17!24.66!ZFP106;;chr9:4299959..4299974,-!p4@GLIS3!1.15!20.82!GLIS3;;chr17:6926362..6926377,+!p1@BCL6B!1.15!13.14!BCL6B;;chr2:113982635..113982648,-!p8@PAX8!1.15!13.14!PAX8;;chrX:101186981..101187030,-!p1@ZMAT1!1.14!41.84!ZMAT1;;chr1:61548374..61548415,+!p4@NFIA!1.14!23.65!NFIA;;chr18:53068911..53068935,-!p4@TCF4!1.14!14.55!TCF4;;chr5:158527104..158527135,-!p4@EBF1!1.14!12.94!EBF1;;chr6:10882270..10882274,-!p1@GCM2!1.14!12.94!GCM2;;chr7:15726296..15726315,-!p1@MEOX2!1.14!12.94!MEOX2;;chr2:19558373..19558392,-!p1@OSR1!1.12!33.75!OSR1;;chr16:79634595..79634620,-!p2@MAF!1.11!21.63!MAF;;chr6:1312325..1312340,+!p1@FOXQ1!1.10!19.00!FOXQ1;;chr14:36990398..36990415,-!p10@NKX2-1!1.10!11.72!NKX2-1;;chrY:2803415..2803468,+!p1@ZFY!1.10!11.52!ZFY;;chr9:102584262..102584276,+!p1@NR4A3!1.09!25.67!NR4A3;;chr12:115121962..115121987,-!p1@TBX3!1.08!93.38!TBX3;;chr2:157199008..157199023,-!p3@NR4A2!1.08!23.24!NR4A2;;chr9:100615546..100615558,+!p4@FOXE1!1.08!11.12!FOXE1;;chr11:16629261..16629284,-!p1@SOX6!1.08!11.12!SOX6;;chr1:164528410..164528428,+!p1@PBX1!1.07!81.45!PBX1;;chr3:12330560..12330579,+!p1@PPARG!1.07!12.33!PPARG;;chr2:95963120..95963136,+!p2@KCNIP3!1.06!10.51!KCNIP3;;chr18:6414884..6414942,-!p1@L3MBTL4!1.05!12.94!L3MBTL4;;chr6:28321971..28321995,-!p1@ZNF323!1.05!10.11!ZNF323;;chr15:61521417..61521460,-!p2@RORA!1.04!22.64!RORA;;chr19:54041574..54041589,+!p6@ZNF331!1.04!9.90!ZNF331;;chr1:2985760..2985774,+!p1@PRDM16!1.04!9.90!PRDM16;;chr8:40755333..40755352,-!p1@ZMAT4!1.04!9.90!ZMAT4;;chr9:114287433..114287513,+!p1@ZNF483!1.03!25.87!ZNF483;;chr12:52431016..52431071,+!p4@NR4A1!1.03!11.32!NR4A1;;chr12:115122318..115122331,-!p2@TBX3!1.03!9.70!TBX3;;chr10:94449675..94449694,+!p2@HHEX!1.02!25.67!HHEX;;chr9:4299552..4299598,-!p5@GLIS3!1.02!16.37!GLIS3;;chr22:19748231..19748317,+!p1@TBX1!1.02!9.50!TBX1;;chr4:57547360..57547371,-!p20@HOPX!1.02!9.50!HOPX;;chr12:26277956..26277980,-!p1@BHLHE41!1.01!34.16!BHLHE41;;chr5:138647473..138647476,+!p6@MATR3!1.01!23.85!MATR3;;chr1:61548069..61548102,+!p3@NFIA!1.01!22.64!NFIA;;chr19:46801639..46801699,+!p1@HIF3A!1.01!9.30!HIF3A;;chr7:63505799..63505904,+!p1@ZNF727!1.01!9.30!ZNF727;;chr13:41240717..41240735,-!p2@FOXO1!1.00!62.25!FOXO1;;chr11:113930401..113930422,+!p3@ZBTB16!1.00!8.89!ZBTB16;;chr3:114866084..114866118,-!p2@ZBTB20!0.98!31.93!ZBTB20;;chr19:58220517..58220583,-!p1@ZNF154!0.98!27.89!ZNF154;;chr20:51588873..51588953,+!p1@TSHZ2!0.98!11.52!TSHZ2;;chr10:8096631..8096660,+!p1@GATA3!0.98!10.51!GATA3;;chr10:8096772..8096787,+!p2@GATA3!0.98!10.11!GATA3;;chr3:111314186..111314204,-!p1@ZBED2!0.98!8.49!ZBED2;;chr7:88389004..88389019,+!p1@ZNF804B!0.98!8.49!ZNF804B;;chr3:71632864..71632885,-!p4@FOXP1!0.97!28.90!FOXP1;;chr16:73092963..73093001,-!p2@ZFHX3!0.97!19.40!ZFHX3;;chr19:31840130..31840160,-!p2@TSHZ3!0.97!13.14!TSHZ3;;chr8:106330696..106330719,+!p2@ZFPM2!0.97!10.71!ZFPM2;;chr5:137804405..137804444,+!p3@EGR1!0.97!10.11!EGR1;;chr16:51185318..51185348,-!p2@SALL1!0.97!8.29!SALL1;;chr2:145277882..145277967,-!p3@ZEB2!0.96!14.35!ZEB2;;chr7:113726357..113726443,+!p1@FOXP2!0.96!14.35!FOXP2;;chr9:102584241..102584261,+!p4@NR4A3!0.96!12.73!NR4A3;;chr3:114819101..114819121,-!p7@ZBTB20!0.96!8.08!ZBTB20;;chr14:36989358..36989378,-!p3@NKX2-1!0.95!7.88!NKX2-1;;chr20:45142154..45142227,-!p1@ZNF334!0.94!15.56!ZNF334;;chr12:54785054..54785072,-!p4@ZNF385A!0.94!8.89!ZNF385A;;chr2:85980919..85980942,+!p4@ATOH8!0.94!8.29!ATOH8;;chr6:28321909..28321965,-!p3@ZNF323!0.94!7.68!ZNF323;;chr9:100616439..100616476,+!p3@FOXE1!0.94!7.68!FOXE1;;chr15:96873984..96873999,+!p3@NR2F2!0.93!56.79!NR2F2;;chr2:113978342..113978354,-!p18@PAX8!0.93!7.48!PAX8;;chr12:52448213..52448262,+!p6@NR4A1!0.93!7.48!NR4A1;;chr13:41240737..41240787,-!p1@FOXO1!0.92!90.14!FOXO1;;chr3:12329397..12329433,+!p2@PPARG!0.92!17.38!PPARG;;chr9:127533519..127533573,-!p2@NR6A1!0.92!8.89!NR6A1;;chr22:31739291..31739311,-!p2@PATZ1!0.92!7.28!PATZ1;;chr1:217251619..217251658,-!p6@ESRRG!0.92!7.28!ESRRG;;chr6:19840114..19840144,+!p15@ID4!0.92!7.28!ID4;;chr9:4300016..4300039,-!p2@GLIS3!0.91!12.53!GLIS3;;chr19:58545454..58545498,+!p1@ZSCAN1!0.91!7.07!ZSCAN1;;chr1:170632477..170632506,+!p6@PRRX1!0.91!7.07!PRRX1;;chr4:149363494..149363543,-!p1@NR3C2!0.91!7.07!NR3C2;;chr16:85932760..85932775,+!p1@IRF8!0.91!7.07!IRF8;;chr13:73633131..73633149,+!p1@KLF5!0.90!77.01!KLF5;;chr12:52448420..52448460,+!p5@NR4A1!0.90!6.87!NR4A1;;chr8:55370487..55370503,+!p1@SOX17!0.90!6.87!SOX17;;chr19:22193731..22193751,-!p1@ZNF208!0.90!6.87!ZNF208;;chr20:39317868..39317884,-!p1@MAFB!0.89!85.09!MAFB;;chr2:60780753..60780800,-!p1@BCL11A!0.89!35.17!BCL11A;;chr1:61547894..61547968,+!p2@NFIA!0.89!20.62!NFIA;;chr11:113930291..113930339,+!p2@ZBTB16!0.89!11.32!ZBTB16;;chr5:137804357..137804390,+!p4@EGR1!0.89!8.08!EGR1;;chr3:114866124..114866149,-!p5@ZBTB20!0.88!11.52!ZBTB20;;chr1:214161328..214161348,+!p2@PROX1!0.88!6.67!PROX1;;chr9:20621834..20621884,-!p5@MLLT3!0.88!6.67!MLLT3;;chr7:73038839..73038862,-!p1@MLXIPL!0.88!6.67!MLXIPL;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.87!44.26!ZNF580;;chr4:87928413..87928433,+!p3@AFF1!0.87!42.04!AFF1;;chr4:87928353..87928401,+!p4@AFF1!0.87!30.32!AFF1;;chr20:50159198..50159299,-!p1@NFATC2!0.86!9.30!NFATC2;;chr1:61924375..61924380,+!p6@NFIA!0.86!9.10!NFIA;;chr18:53089538..53089578,-!p14@TCF4!0.86!6.27!TCF4;;chr11:125034605..125034636,+!p2@PKNOX2!0.86!6.27!PKNOX2;;chr12:52448293..52448318,+!p10@NR4A1!0.86!6.27!NR4A1;;chr2:25564750..25564807,-!p1@DNMT3A!0.85!24.46!DNMT3A;;chr14:21994337..21994442,-!p1@SALL2!0.85!17.58!SALL2;;chr12:125003087..125003141,-!p4@NCOR2!0.85!7.88!NCOR2;;chr20:51589133..51589159,+!p2@TSHZ2!0.85!6.06!TSHZ2;;chr7:15726243..15726293,-!p2@MEOX2!0.85!6.06!MEOX2;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.85!6.06!ZNF676;;chrX:79277364..79277369,+!p3@TBX22!0.85!6.06!TBX22;;chr5:137801160..137801176,+!p1@EGR1!0.84!627.37!EGR1;;chr2:157198916..157198978,-!p2@NR4A2!0.84!22.23!NR4A2;;chr19:19729477..19729542,-!p1@PBX4!0.84!13.14!PBX4;;chr9:4300004..4300015,-!p6@GLIS3!0.84!6.87!GLIS3;;chr7:64342913..64342935,+!p2@ZNF273!0.84!5.86!ZNF273;;chr12:52448338..52448401,+!p7@NR4A1!0.84!5.86!NR4A1;;chr21:44441260..44441273,+!p3@PKNOX1!0.84!5.86!PKNOX1;;chr1:212782094..212782109,+!p1@ATF3!0.83!168.77!ATF3;;chr7:86781916..86781963,+!p2@DMTF1!0.83!26.48!DMTF1;;chr19:38085768..38085821,+!p1@ZNF540!0.83!8.89!ZNF540;;chr2:43453734..43453751,-!p1@ZFP36L2!0.82!650.62!ZFP36L2;;chr5:88178983..88179012,-!p1@MEF2C!0.82!46.89!MEF2C;;chr17:1959369..1959388,+!p2@HIC1!0.82!15.56!HIC1;;chr9:20621927..20621996,-!p3@MLLT3!0.82!9.90!MLLT3;;chr1:151043070..151043110,+!p3@GABPB2!0.82!9.30!GABPB2;;chr9:127533582..127533615,-!p1@NR6A1!0.82!8.69!NR6A1;;chr9:109625401..109625458,+!p1@ZNF462!0.81!15.36!ZNF462;;chr19:58545369..58545404,+!p2@ZSCAN1!0.81!5.46!ZSCAN1;;chr12:115121802..115121814,-!p5@TBX3!0.81!5.46!TBX3;;chr19:33793430..33793447,-!p1@CEBPA!0.80!24.05!CEBPA;;chr2:85980951..85981004,+!p1@ATOH8!0.80!9.10!ATOH8;;chr3:169381420..169381535,-!p1@MECOM!0.80!6.27!MECOM;;chr1:170633262..170633285,+!p3@PRRX1!0.79!6.06!PRRX1;;chr3: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+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0007123,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:10060-101H6: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:09, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0