FF:10684-109E9: Difference between revisions

Revision as of 19:36, 9 July 2012

Name:	myxofibrosarcoma cell line:NMFH-1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	unclassifiable
dev stage	NA
sex	male
age	89
cell type	fibroblast
cell line	NMFH-1
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.053
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.443
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0734
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0145
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0594
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.191
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.16
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.142
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.28
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0349
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0299
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.00449
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.487
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.14
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.111
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.136
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.136
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.0971
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11821

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0357
MA0003.1	MA0003.1	0.058
MA0004.1	MA0004.1	0.056
MA0006.1	MA0006.1	0.433
MA0007.1	MA0007.1	0.608
MA0009.1	MA0009.1	0.386
MA0014.1	MA0014.1	0.345
MA0017.1	MA0017.1	0.0294
MA0018.2	MA0018.2	0.441
MA0019.1	MA0019.1	0.991
MA0024.1	MA0024.1	3.8554e-5
MA0025.1	MA0025.1	0.247
MA0027.1	MA0027.1	0.35
MA0028.1	MA0028.1	3.72638e-4
MA0029.1	MA0029.1	0.84
MA0030.1	MA0030.1	0.891
MA0031.1	MA0031.1	0.667
MA0035.2	MA0035.2	0.219
MA0038.1	MA0038.1	0.00224
MA0039.2	MA0039.2	0.224
MA0040.1	MA0040.1	0.999
MA0041.1	MA0041.1	0.204
MA0042.1	MA0042.1	0.525
MA0043.1	MA0043.1	0.27
MA0046.1	MA0046.1	0.524
MA0047.2	MA0047.2	0.638
MA0048.1	MA0048.1	0.298
MA0050.1	MA0050.1	0.394
MA0051.1	MA0051.1	0.628
MA0052.1	MA0052.1	0.354
MA0055.1	MA0055.1	0.311
MA0057.1	MA0057.1	0.678
MA0058.1	MA0058.1	0.00166
MA0059.1	MA0059.1	0.194
MA0060.1	MA0060.1	1.77933e-8
MA0061.1	MA0061.1	0.0031
MA0062.2	MA0062.2	4.45845e-4
MA0065.2	MA0065.2	1.90797e-4
MA0066.1	MA0066.1	0.357
MA0067.1	MA0067.1	0.033
MA0068.1	MA0068.1	0.148
MA0069.1	MA0069.1	0.682
MA0070.1	MA0070.1	0.202
MA0071.1	MA0071.1	0.45
MA0072.1	MA0072.1	0.94
MA0073.1	MA0073.1	0.253
MA0074.1	MA0074.1	0.565
MA0076.1	MA0076.1	4.85791e-5
MA0077.1	MA0077.1	0.228
MA0078.1	MA0078.1	0.111
MA0079.2	MA0079.2	0.876
MA0080.2	MA0080.2	1.61679e-9
MA0081.1	MA0081.1	0.207
MA0083.1	MA0083.1	0.673
MA0084.1	MA0084.1	0.993
MA0087.1	MA0087.1	0.325
MA0088.1	MA0088.1	0.163
MA0090.1	MA0090.1	0.737
MA0091.1	MA0091.1	0.184
MA0092.1	MA0092.1	0.562
MA0093.1	MA0093.1	0.0214
MA0099.2	MA0099.2	3.83199e-10
MA0100.1	MA0100.1	0.0652
MA0101.1	MA0101.1	0.642
MA0102.2	MA0102.2	0.676
MA0103.1	MA0103.1	6.23554e-6
MA0104.2	MA0104.2	0.0796
MA0105.1	MA0105.1	0.00257
MA0106.1	MA0106.1	0.917
MA0107.1	MA0107.1	0.138
MA0108.2	MA0108.2	0.452
MA0111.1	MA0111.1	0.387
MA0112.2	MA0112.2	0.00183
MA0113.1	MA0113.1	0.184
MA0114.1	MA0114.1	0.123
MA0115.1	MA0115.1	0.9
MA0116.1	MA0116.1	0.0113
MA0117.1	MA0117.1	0.961
MA0119.1	MA0119.1	0.859
MA0122.1	MA0122.1	0.325
MA0124.1	MA0124.1	0.342
MA0125.1	MA0125.1	0.971
MA0131.1	MA0131.1	0.388
MA0135.1	MA0135.1	0.47
MA0136.1	MA0136.1	0.00254
MA0137.2	MA0137.2	0.597
MA0138.2	MA0138.2	0.034
MA0139.1	MA0139.1	0.963
MA0140.1	MA0140.1	0.449
MA0141.1	MA0141.1	0.295
MA0142.1	MA0142.1	0.0772
MA0143.1	MA0143.1	0.132
MA0144.1	MA0144.1	0.626
MA0145.1	MA0145.1	0.233
MA0146.1	MA0146.1	0.795
MA0147.1	MA0147.1	0.332
MA0148.1	MA0148.1	0.821
MA0149.1	MA0149.1	0.382
MA0150.1	MA0150.1	0.282
MA0152.1	MA0152.1	0.18
MA0153.1	MA0153.1	0.179
MA0154.1	MA0154.1	5.96461e-4
MA0155.1	MA0155.1	0.0997
MA0156.1	MA0156.1	0.715
MA0157.1	MA0157.1	0.5
MA0159.1	MA0159.1	0.0294
MA0160.1	MA0160.1	0.531
MA0162.1	MA0162.1	0.41
MA0163.1	MA0163.1	0.188
MA0164.1	MA0164.1	0.75
MA0258.1	MA0258.1	0.00352
MA0259.1	MA0259.1	0.717

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11821

Novel motif	Logo	P-value
1	1	0.509
10	10	0.22
100	100	0.98
101	101	0.473
102	102	0.892
103	103	0.548
104	104	0.728
105	105	0.308
106	106	0.0387
107	107	0.337
108	108	0.219
109	109	0.695
11	11	0.281
110	110	0.42
111	111	0.0617
112	112	0.215
113	113	0.033
114	114	0.0196
115	115	0.86
116	116	0.929
117	117	0.967
118	118	0.411
119	119	0.0503
12	12	0.546
120	120	0.717
121	121	0.969
122	122	0.334
123	123	0.095
124	124	0.194
125	125	0.37
126	126	0.623
127	127	0.423
128	128	0.427
129	129	0.0921
13	13	0.329
130	130	0.0254
131	131	0.465
132	132	0.465
133	133	0.00672
134	134	0.338
135	135	0.12
136	136	0.534
137	137	0.625
138	138	0.587
139	139	1.05473e-4
14	14	0.412
140	140	0.015
141	141	0.345
142	142	0.669
143	143	0.0115
144	144	0.96
145	145	0.258
146	146	0.57
147	147	0.533
148	148	0.808
149	149	0.272
15	15	0.249
150	150	0.416
151	151	0.343
152	152	0.084
153	153	0.28
154	154	0.356
155	155	0.357
156	156	0.632
157	157	0.135
158	158	0.284
159	159	0.107
16	16	0.485
160	160	0.153
161	161	0.228
162	162	0.71
163	163	0.977
164	164	0.62
165	165	0.965
166	166	0.739
167	167	0.148
168	168	0.33
169	169	0.227
17	17	0.125
18	18	0.816
19	19	0.566
2	2	0.938
20	20	0.753
21	21	0.499
22	22	0.46
23	23	0.121
24	24	0.993
25	25	0.726
26	26	0.726
27	27	0.133
28	28	0.505
29	29	0.937
3	3	0.382
30	30	0.677
31	31	0.45
32	32	0.53
33	33	0.854
34	34	0.245
35	35	0.295
36	36	0.922
37	37	0.451
38	38	0.4
39	39	0.637
4	4	0.0761
40	40	0.219
41	41	0.0914
42	42	0.54
43	43	0.213
44	44	0.187
45	45	0.258
46	46	0.461
47	47	0.31
48	48	0.35
49	49	0.208
5	5	0.0684
50	50	0.993
51	51	0.416
52	52	0.141
53	53	0.56
54	54	0.519
55	55	0.731
56	56	0.524
57	57	0.49
58	58	0.227
59	59	0.0711
6	6	0.391
60	60	0.134
61	61	0.954
62	62	0.217
63	63	0.248
64	64	0.654
65	65	0.435
66	66	0.0911
67	67	0.613
68	68	0.117
69	69	0.332
7	7	0.262
70	70	0.114
71	71	0.441
72	72	0.708
73	73	0.269
74	74	0.13
75	75	0.859
76	76	0.936
77	77	0.123
78	78	0.0174
79	79	0.959
8	8	0.445
80	80	0.237
81	81	0.719
82	82	2.17527e-4
83	83	0.737
84	84	0.534
85	85	0.221
86	86	0.46
87	87	0.235
88	88	0.658
89	89	0.0562
9	9	0.72
90	90	0.239
91	91	0.328
92	92	0.0616
93	93	0.774
94	94	0.136
95	95	0.929
96	96	0.174
97	97	0.596
98	98	0.642
99	99	0.984

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11821

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
CL:0002620 skin fibroblast
DOID:1907 malignant fibroxanthoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100460 fibrosarcoma cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
4231 (histiocytoma)
201 (connective tissue cancer)
0060100 (musculoskeletal system cancer)
1115 (sarcoma)
1907 (malignant fibroxanthoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100453 (fibroblast cell line sample)
0100400 (sarcoma cell line sample)
0100460 (fibrosarcoma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!2.31!226.27!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.63!56.34!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!1.62!41.06!PRRX1;;chr12:115122318..115122331,-!p2@TBX3!1.53!32.77!TBX3;;chr11:65667884..65667895,-!p2@FOSL1!1.50!114.51!FOSL1;;chr1:170632477..170632506,+!p6@PRRX1!1.50!30.56!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.50!30.38!HOXC5;;chr2:19558373..19558392,-!p1@OSR1!1.49!80.45!OSR1;;chr1:170632250..170632277,+!p7@PRRX1!1.46!28.17!PRRX1;;chr12:66218598..66218645,+!p2@HMGA2!1.43!117.09!HMGA2;;chr6:1312325..1312340,+!p1@FOXQ1!1.42!40.87!FOXQ1;;chr12:115121770..115121781,-!p4@TBX3!1.39!23.75!TBX3;;chr12:66218255..66218304,+!p3@HMGA2!1.35!56.70!HMGA2;;chr6:1389789..1389821,+!p1@FOXF2!1.35!29.09!FOXF2;;chr12:115121802..115121814,-!p5@TBX3!1.33!20.62!TBX3;;chr1:158985493..158985535,+!p4@IFI16!1.32!29.83!IFI16;;chr7:27205106..27205134,-!p2@HOXA9!1.32!20.07!HOXA9;;chr8:25902876..25902936,-!p1@EBF2!1.32!20.07!EBF2;;chr11:65667846..65667868,-!p1@FOSL1!1.31!500.03!FOSL1;;chr7:27196267..27196311,-!p1@HOXA7!1.31!19.52!HOXA7;;chr2:239756671..239756732,+!p1@TWIST2!1.30!59.28!TWIST2;;chr1:170632959..170632987,+!p4@PRRX1!1.26!18.96!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!1.26!17.31!PRRX1;;chr2:102091566..102091581,-!p1@RFX8!1.25!16.94!RFX8;;chr5:321810..321877,+!p1@AHRR!1.24!51.92!AHRR;;chr1:170632439..170632465,+!p11@PRRX1!1.24!16.39!PRRX1;;chr1:170633262..170633285,+!p3@PRRX1!1.21!17.31!PRRX1;;chr7:14029283..14029311,-!p1@ETV1!1.19!76.22!ETV1;;chr1:170632762..170632786,+!p13@PRRX1!1.19!14.54!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!1.18!13.99!PRRX1;;chr2:239756739..239756755,+!p2@TWIST2!1.16!23.20!TWIST2;;chr6:45296048..45296082,+!p1@RUNX2!1.16!15.46!RUNX2;;chr19:31840130..31840160,-!p2@TSHZ3!1.15!20.25!TSHZ3;;chr12:115122303..115122314,-!p6@TBX3!1.15!13.07!TBX3;;chr8:77593474..77593612,+!p1@ZFHX4!1.14!53.39!ZFHX4;;chr7:27205136..27205164,-!p1@HOXA9!1.13!12.52!HOXA9;;chr7:19157248..19157268,-!p1@TWIST1!1.12!34.06!TWIST1;;chr2:176969228..176969260,+!p1@HOXD11!1.10!11.60!HOXD11;;chr8:72756063..72756125,-!p1@MSC!1.09!23.01!MSC;;chr6:1389989..1390019,+!p2@FOXF2!1.09!11.41!FOXF2;;chr1:170632310..170632321,+!p15@PRRX1!1.09!11.41!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!1.09!11.23!PRRX1;;chr11:65686732..65686756,+!p2@DRAP1!1.08!46.39!DRAP1;;chr7:19157043..19157088,-!p2@TWIST1!1.08!27.80!TWIST1;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.51!FOXC2;;chr9:77112244..77112262,+!p1@RORB!1.07!12.15!RORB;;chr16:29819446..29819471,+!p9@MAZ!1.05!30.75!MAZ;;chr3:141121847..141121868,+!p5@ZBTB38!1.05!15.83!ZBTB38;;chr12:66218836..66218888,+!p1@HMGA2!1.04!93.89!HMGA2;;chr7:113726357..113726443,+!p1@FOXP2!1.04!17.31!FOXP2;;chr3:21792585..21792625,-!p2@ZNF385D!1.04!11.05!ZNF385D;;chr15:60884706..60884743,-!p1@RORA!1.03!51.18!RORA;;chr12:115122262..115122271,-!p7@TBX3!1.03!9.76!TBX3;;chr2:200322654..200322707,-!p2@SATB2!1.02!13.99!SATB2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.02!9.57!HOXC5;;chr7:27224842..27224872,-!p1@HOXA11!1.01!9.21!HOXA11;;chr5:133450365..133450444,+!p1@TCF7!1.00!41.61!TCF7;;chr8:72756267..72756296,-!p4@MSC!1.00!13.44!MSC;;chr1:170632115..170632136,+!p9@PRRX1!0.99!8.84!PRRX1;;chr3:21792682..21792720,-!p1@ZNF385D!0.97!8.28!ZNF385D;;chr19:13134457..13134462,+!p5@NFIX!0.96!14.91!NFIX;;chr7:27192185..27192209,-!p1@HOXA3!0.95!7.92!HOXA3;;chr21:36260295..36260310,-!p3@RUNX1!0.94!12.70!RUNX1;;chr2:172949484..172949522,+!p1@DLX1!0.94!7.73!DLX1;;chr8:72755987..72756002,-!p7@MSC!0.93!7.55!MSC;;chr12:66218573..66218596,+!p7@HMGA2!0.91!10.86!HMGA2;;chr16:29819403..29819442,+!p5@MAZ!0.90!60.57!MAZ;;chr12:26277956..26277980,-!p1@BHLHE41!0.89!25.41!BHLHE41;;chr8:72756023..72756055,-!p6@MSC!0.89!8.47!MSC;;chr3:21792631..21792665,-!p3@ZNF385D!0.89!6.81!ZNF385D;;chr1:170632647..170632659,+!p17@PRRX1!0.89!6.81!PRRX1;;chr18:22932080..22932170,-!p1@ZNF521!0.88!29.64!ZNF521;;chr12:66218212..66218244,+!p5@HMGA2!0.88!9.76!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.87!56.89!TBX3;;chr11:46299199..46299233,+!p1@CREB3L1!0.87!35.16!CREB3L1;;chr19:13134772..13134822,+!p2@NFIX!0.87!9.76!NFIX;;chr8:72756637..72756664,-!p3@MSC!0.87!7.36!MSC;;chr3:157823517..157823562,-!p1@SHOX2!0.87!7.00!SHOX2;;chr7:15726243..15726293,-!p2@MEOX2!0.87!6.44!MEOX2;;chr12:54380404..54380433,+!p3@HOXC10!0.87!6.44!HOXC10;;chr6:34204921..34204939,+!p3@HMGA1!0.85!194.42!HMGA1;;chr14:24837368..24837401,+!p1@NFATC4!0.85!14.91!NFATC4;;chr19:35759824..35759891,+!p1@USF2!0.84!195.15!USF2;;chr12:52445218..52445237,+!p1@NR4A1!0.84!80.45!NR4A1;;chr17:45810594..45810608,+!p1@TBX21!0.84!5.89!TBX21;;chr2:102091144..102091183,-!p2@RFX8!0.84!5.89!RFX8;;chr2:176994408..176994492,+!p1@HOXD8!0.83!5.71!HOXD8;;chr3:147127142..147127168,+!p1@ZIC1!0.83!5.71!ZIC1;;chr10:64018918..64018936,+!p2@ZNF365!0.83!5.71!ZNF365;;chr5:137801160..137801176,+!p1@EGR1!0.82!596.14!EGR1;;chr17:38256822..38256851,-!p1@NR1D1!0.82!47.68!NR1D1;;chr16:86612320..86612394,+!p1@FOXL1!0.81!5.52!FOXL1;;chr12:66218904..66218913,+!p11@HMGA2!0.81!5.52!HMGA2;;chr17:59477233..59477263,+!p1@TBX2!0.80!17.67!TBX2;;chr18:3448455..3448480,+!p5@TGIF1!0.80!10.31!TGIF1;;chr7:27196217..27196246,-!p2@HOXA7!0.80!5.34!HOXA7;;chr7:27224795..27224840,-!p2@HOXA11!0.80!5.34!HOXA11;;chr8:77593750..77593757,+!p3@ZFHX4!0.79!5.15!ZFHX4;;chr1:170632325..170632339,+!p24@PRRX1!0.79!5.15!PRRX1;;chr12:27485823..27485868,+!p2@ARNTL2!0.78!22.28!ARNTL2;;chr12:66218003..66218018,+!p9@HMGA2!0.78!6.26!HMGA2;;chr1:59249645..59249656,-!p4@JUN!0.77!13.07!JUN;;chr12:66218183..66218209,+!p4@HMGA2!0.77!9.94!HMGA2;;chr12:27485762..27485776,+!p3@ARNTL2!0.76!13.62!ARNTL2;;chr15:60884747..60884774,-!p3@RORA!0.76!12.52!RORA;;chr7:14028488..14028516,-!p2@ETV1!0.76!5.34!ETV1;;chr16:86600870..86600921,+!p2@FOXC2!0.76!4.79!FOXC2;;chr2:19558327..19558334,-!p2@OSR1!0.76!4.79!OSR1;;chr11:65686952..65686975,+!p5@DRAP1!0.75!27.98!DRAP1;;chr7:17338324..17338341,+!p3@AHR!0.75!16.75!AHR;;chr7:14029312..14029325,-!p4@ETV1!0.75!5.89!ETV1;;chr2:176969179..176969226,+!p2@HOXD11!0.75!4.60!HOXD11;;chr3:141121820..141121838,+!p9@ZBTB38!0.75!4.60!ZBTB38;;chr3:21792790..21792824,-!p4@ZNF385D!0.75!4.60!ZNF385D;;chr17:46806067..46806097,-!p1@HOXB13!0.75!4.60!HOXB13;;chr1:170632867..170632878,+!p21@PRRX1!0.75!4.60!PRRX1;;chr1:23857698..23857733,-!p1@E2F2!0.74!8.65!E2F2;;chr12:2986275..2986363,-!p1@FOXM1!0.73!49.52!FOXM1;;chr6:106534230..106534254,+!p2@PRDM1!0.73!11.97!PRDM1;;chr5:158526917..158526932,-!p1@EBF1!0.73!11.78!EBF1;;chr12:54402745..54402788,+!p1@HOXC8!0.73!4.42!HOXC8;;chr2:119605214..119605230,-!p1@EN1!0.73!4.42!EN1;;chr17:59477403..59477414,+!p4@TBX2!0.73!4.42!TBX2;;chr7:27135591..27135658,-!p1@HOXA1!0.72!8.65!HOXA1;;chr12:66218378..66218401,+!p6@HMGA2!0.72!7.00!HMGA2;;chr8:72756213..72756243,-!p5@MSC!0.72!5.71!MSC;;chr1:119530493..119530572,-!p1@TBX15!0.72!4.23!TBX15;;chr1:170632414..170632421,+!p28@PRRX1!0.72!4.23!PRRX1;;chr9:77112225..77112238,+!p2@RORB!0.72!4.23!RORB;;chr20:32274179..32274213,-!p1@E2F1!0.70!30.01!E2F1;;chr11:65686802..65686818,+!p6@DRAP1!0.70!7.55!DRAP1;;chr16:29819558..29819572,+!p28@MAZ!0.70!4.05!MAZ;;chr1:170633194..170633205,+!p18@PRRX1!0.69!3.87!PRRX1;;chr7:27213893..27213954,-!p1@HOXA10!0.69!3.87!HOXA10;;chr8:72756380..72756427,-!p8@MSC!0.69!3.87!MSC;;chrY:2803415..2803468,+!p1@ZFY!0.69!3.87!ZFY;;chr19:23433144..23433204,-!p1@ZNF724P!0.68!19.15!ZNF724P;;chr1:158979872..158979898,+!p3@IFI16!0.68!13.07!IFI16;;chr19:31840313..31840380,-!p1@TSHZ3!0.68!10.68!TSHZ3;;chr2:71127699..71127744,+!p1@VAX2!0.68!8.47!VAX2;;chr12:26277929..26277955,-!p3@BHLHE41!0.68!5.71!BHLHE41;;chr1:158985469..158985489,+!p7@IFI16!0.68!4.60!IFI16;;chr5:137804484..137804498,+!p2@EGR1!0.67!16.57!EGR1;;chr9:16870710..16870763,-!p1@BNC2!0.67!6.81!BNC2;;chr11:6947720..6947812,+!p1@ZNF215!0.67!4.97!ZNF215;;chr12:54393880..54393962,+!p1@HOXC9!0.67!3.68!HOXC9;;chr12:66218923..66218934,+!p14@HMGA2!0.67!3.68!HMGA2;;chr16:67198633..67198671,+!p1@HSF4!0.67!3.68!HSF4;;chr19:31840278..31840300,-!p5@TSHZ3!0.67!3.68!TSHZ3;;chr12:96588143..96588185,+!p1@ELK3!0.66!51.18!ELK3;;chr17:46621937..46621966,-!p2@HOXB2!0.66!10.86!HOXB2;;chr2:172967621..172967637,-!p1@DLX2!0.66!10.68!DLX2;;chr2:185463247..185463263,+!p1@ZNF804A!0.66!6.81!ZNF804A;;chr8:72756667..72756736,-!p2@MSC!0.66!5.89!MSC;;chr4:26322267..26322334,+!p3@RBPJ!0.65!9.39!RBPJ;;chr11:65668011..65668020,-!p3@FOSL1!0.65!3.50!FOSL1;;chr12:77459306..77459365,-!p1@E2F7!0.64!49.71!E2F7;;chr5:72744594..72744609,-!p1@FOXD1!0.64!17.86!FOXD1;;chr3:114343768..114343822,-!p1@ZBTB20!0.64!17.12!ZBTB20;;chr6:106534192..106534224,+!p1@PRDM1!0.64!10.68!PRDM1;;chr7:137686552..137686564,-!p9@CREB3L2!0.64!5.34!CREB3L2;;chr5:137804405..137804444,+!p3@EGR1!0.64!4.23!EGR1;;chr21:47063625..47063658,+!p1@PCBP3!0.63!16.39!PCBP3;;chr9:109625401..109625458,+!p1@ZNF462!0.63!9.76!ZNF462;;chr2:200323414..200323455,-!p1@SATB2!0.63!7.73!SATB2;;chr2:45236540..45236577,-!p1@SIX2!0.63!3.31!SIX2;;chr2:74741569..74741620,+!p1@TLX2!0.63!3.31!TLX2;;chr2:85981107..85981120,+!p3@ATOH8!0.63!3.31!ATOH8;;chr19:46801639..46801699,+!p1@HIF3A!0.63!3.31!HIF3A;;chr21:36260980..36261011,-!p1@RUNX1!0.62!108.81!RUNX1;;chr8:49833978..49833996,-!p1@SNAI2!0.62!78.80!SNAI2;;chr3:71114066..71114114,-!p1@FOXP1!0.62!76.59!FOXP1;;chr5:88178983..88179012,-!p1@MEF2C!0.62!28.90!MEF2C;;chr1:164528445..164528459,+!p2@PBX1!0.62!11.41!PBX1;;chr9:102584262..102584276,+!p1@NR4A3!0.62!7.92!NR4A3;;chrY:21906594..21906622,-!p1@KDM5D!0.62!3.13!KDM5D;;chr1:170632583..170632590,+!p26@PRRX1!0.62!3.13!PRRX1;;chr7:17338266..17338282,+!p1@AHR!0.61!40.14!AHR;;chr17:41277372..41277418,-!p1@BRCA1!0.61!13.07!BRCA1;;chr5:134369905..134369972,-!p1@PITX1!0.61!5.15!PITX1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.61!3.31!GLIS1;;chr12:27485785..27485816,+!p1@ARNTL2!0.60!25.04!ARNTL2;;chr12:48298785..48298828,-!p1@VDR!0.60!18.78!VDR;;chr2:74730430..74730451,-!p1@LBX2!0.60!5.34!LBX2;;chr21:36260343..36260402,-!p6@RUNX1!0.60!5.15!RUNX1;;chr5:43067636..43067674,+!p6@ZNF131!0.60!4.23!ZNF131;;chr1:17063290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S18BP1!0.22!22.83!MIS18BP1;;chr1:150849047..150849082,-!p1@ARNT!0.22!22.46!ARNT;;chr11:130184753..130184824,-!p1@ZBTB44!0.22!19.70!ZBTB44;;chr19:12273866..12273935,+!p1@ZNF136!0.22!12.89!ZNF136;;chr1:247267618..247267674,-!p1@ZNF669!0.22!11.23!ZNF669;;chr19:21264991..21265026,+!p1@ZNF714!0.22!9.21!ZNF714;;chr14:74253865..74253917,-!p2@C14orf43!0.22!8.84!C14orf43;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.22!6.44!GLIS2;;chr7:5085480..5085510,+!p1@RBAK!0.22!6.26!RBAK;;chr18:45456800..45456886,-!p4@SMAD2!0.22!4.97!SMAD2;;chr6:157099198..157099221,+!p3@ARID1B!0.22!4.23!ARID1B;;chr7:99156314..99156372,+!p4@ZNF655!0.22!4.23!ZNF655;;chr8:37963407..37963454,+!p2@ASH2L!0.22!3.68!ASH2L;;chr7:99102267..99102304,+!p2@ZKSCAN5!0.22!2.76!ZKSCAN5;;chr6:151712800..151712835,-!p2@ZBTB2!0.22!2.58!ZBTB2;;chr19:8578683..8578750,-!p2@ZNF414!0.22!2.39!ZNF414;;chr12:122516678..122516687,+!p3@MLXIP!0.22!2.03!MLXIP;;chr8:42698494..42698507,-!p3@THAP1!0.22!2.03!THAP1;;chr8:128750175..128750201,+!p8@MYC!0.22!1.84!MYC;;chr9:110252074..110252079,-!p3@KLF4!0.22!1.66!KLF4;;chr7:77428227..77428242,+!p3@PHTF2!0.22!1.47!PHTF2;;chr18:3449695..3449712,+!p9@TGIF1!0.22!1.47!TGIF1;;chr6:108882364..108882391,+!p4@FOXO3!0.22!1.29!FOXO3;;chr7:104752306..104752335,+!p4@MLL5!0.22!1.29!MLL5;;chr1:61924375..61924380,+!p6@NFIA!0.22!1.29!NFIA;;chr1:221052733..221052749,+!p2@HLX!0.22!1.10!HLX;;chr1:23694556..23694584,-!p6@ZNF436!0.22!1.10!ZNF436;;chr21:36231861..36231877,-!p12@RUNX1!0.22!1.10!RUNX1;;chr7:44143997..44144008,+!p3@AEBP1!0.22!1.10!AEBP1;;chr8:106330696..106330719,+!p2@ZFPM2!0.22!1.10!ZFPM2;;chr11:62369806..62369837,-!p8@MTA2!0.22!1.10!MTA2;;chr1:211432810..211432817,+!p9@RCOR3!0.22!0.92!RCOR3;;chr4:81104958..81104981,+!p5@PRDM8!0.22!0.92!PRDM8;;chr16:67063262..67063273,+!p7@CBFB!0.22!0.92!CBFB;;chr17:41623075..41623101,-!p9@ETV4!0.22!0.92!ETV4;;chr2:74374995..74375055,-!p1@BOLA3!0.21!64.99!BOLA3;;chr7:100076765..100076861,-!p1@TSC22D4!0.21!50.81!TSC22D4;;chr19:6279932..6280000,-!p1@MLLT1!0.21!36.82!MLLT1;;chr19:9695169..9695188,-!p1@ZNF121!0.21!25.59!ZNF121;;chr9:73028814..73028895,-!p1@KLF9!0.21!13.81!KLF9;;chr21:44394645..44394737,+!p1@PKNOX1!0.21!11.60!PKNOX1;;chr2:148778590..148778647,+!p2@MBD5!0.21!10.49!MBD5;;chr1:27022164..27022220,+!p2@ARID1A!0.21!10.31!ARID1A;;chr9:99540335..99540388,-!p1@ZNF510!0.21!10.13!ZNF510;;chr20:306177..306211,+!p2@SOX12!0.21!9.39!SOX12;;chr11:123612319..123612395,-!p1@ZNF202!0.21!7.73!ZNF202;;chr15:50647370..50647405,-!p2@GABPB1!0.21!7.18!GABPB1;;chr16:67063211..67063240,+!p2@CBFB!0.21!6.26!CBFB;;chr10:96122645..96122675,-!p2@NOC3L!0.21!6.26!NOC3L;;chr9:125693757..125693818,-!p1@ZBTB26!0.21!5.71!ZBTB26;;chr19:6110555..6110617,-!p2@RFX2!0.21!4.23!RFX2;;chr1:23694794..23694863,-!p1@ZNF436!0.21!4.23!ZNF436;;chr6:109804367..109804402,-!p2@ZBTB24!0.21!3.50!ZBTB24;;chr6:15246200..15246214,+!p2@JARID2!0.21!3.31!JARID2;;chr21:36259445..36259519,-!p4@RUNX1!0.21!3.31!RUNX1;;chr19:20188776..20188826,+!p1@ZNF90!0.21!3.13!ZNF90;;chr19:33864571..33864596,+!p2@CEBPG!0.21!2.76!CEBPG;;chr1:200379104..200379128,-!p2@ZNF281!0.21!2.76!ZNF281;;chr1:226595726..226595737,-!p2@PARP1!0.21!2.76!PARP1;;chr8:60031619..60031676,-!p1@TOX!0.21!2.39!TOX;;chr7:64254834..64254854,+!p2@ZNF138!0.21!1.84!ZNF138;;chr19:35417798..35417842,+!p1@ZNF30!0.21!1.66!ZNF30;;chr18:51690935..51690957,-!p8@MBD2!0.21!1.29!MBD2;;chr2:174830540..174830563,-!p8@SP3!0.21!1.29!SP3;;chr19:13106383..13106423,+!p8@NFIX!0.21!1.10!NFIX;;
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=FF:0100400,FF:0100453
 |fonse_cell_line_closure=FF:0100400,FF:0100453

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FF:10684-109E9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 19:36, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0