FFCP PHASE1:Mm9::chr4:108520961..108521010,-: Difference between revisions
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|id=chr4:108520961..108521010,- | |id=chr4:108520961..108521010,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000057,5.62e-30,1;CL:0000632,5.62e-30,1;CL:0000215,4.56e-11,3;CL:0000151,5.71e-11,3;CL:0000499,5.71e-11,3;CL:0000327,5.71e-11,3;CL:0000182,3.64e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.16e-08!114;UBERON:0004111!7.90e-08!122 | |ontology_enrichment_uberon=UBERON:0000025!3.16e-08!114;UBERON:0004111!7.90e-08!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0002107,6.90e-13,22;UBERON:0007499,6.90e-13,22;UBERON:0006925,6.90e-13,22;UBERON:0009497,6.90e-13,22;UBERON:0000015,6.90e-13,22;UBERON:0002423,6.90e-13,22;UBERON:0006235,6.90e-13,22;UBERON:0008835,6.90e-13,22;UBERON:0003894,6.90e-13,22;UBERON:0004161,6.90e-13,22;UBERON:0008836,6.90e-13,22;UBERON:0009854,2.24e-12,23;UBERON:0009856,2.24e-12,23;UBERON:0002365,1.80e-11,25;UBERON:0002330,1.80e-11,25;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5;UBERON:0005256,8.07e-07,45 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0,0.919218786610021,0,0.255374676170375,0.307213066512487,0.263772575460388,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0,0,0,8.69593466105033,1.72084775396277,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.470354828542819,0.251333182659351,0,0,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.373220911830279,0,0,0,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0,0.492502392237286,0.324275238183423,0.584799949701329,0.219550115291051,0.402619256281115,0.210289948564127,0.205809224758569,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.350679099451593,0.379419222745544,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0,0.952174563544055,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0.81443479676788,0,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.619160603889667,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0.505394423527595,0,0,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0,0,0,0.474540072496697,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000164855 | |short_description=p1@ENSMUST00000164855 | ||
}} | }} | ||
Revision as of 19:44, 13 November 2012
| Short description: | p1@ENSMUST00000164855 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENSMUST00000164855_5end |
| Coexpression cluster: | MCL_coexpression_mm9:26 |
| Association with transcript: | 213bp_to_ENSMUST00000164855_5end |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lining cell | 2.87e-30 | 1 |
| meso-epithelial cell | 2.87e-30 | 1 |
| endothelial cell | 2.87e-30 | 1 |
| endothelial cell of sinusoid | 2.87e-30 | 1 |
| endothelial cell of hepatic sinusoid | 2.87e-30 | 1 |
| fibroblast | 5.62e-30 | 1 |
| hepatic stellate cell | 5.62e-30 | 1 |
| barrier cell | 4.56e-11 | 3 |
| secretory cell | 5.71e-11 | 3 |
| stromal cell | 5.71e-11 | 3 |
| extracellular matrix secreting cell | 5.71e-11 | 3 |
| hepatocyte | 3.64e-07 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| bile duct | 2.87e-30 | 1 |
| hepatic sinusoid | 2.87e-30 | 1 |
| parenchyma | 2.87e-30 | 1 |
| abdomen blood vessel | 2.87e-30 | 1 |
| sinusoid | 2.87e-30 | 1 |
| digestive system duct | 2.87e-30 | 1 |
| abdominal segment blood vessel | 2.87e-30 | 1 |
| trunk blood vessel | 2.87e-30 | 1 |
| liver parenchyma | 2.87e-30 | 1 |
| liver lobule | 2.87e-30 | 1 |
| biliary system | 2.87e-30 | 1 |
| biliary tree | 2.87e-30 | 1 |
| biliary bud | 2.87e-30 | 1 |
| hepatic duct | 2.87e-30 | 1 |
| liver | 6.90e-13 | 22 |
| epithelial sac | 6.90e-13 | 22 |
| digestive gland | 6.90e-13 | 22 |
| epithelium of foregut-midgut junction | 6.90e-13 | 22 |
| anatomical boundary | 6.90e-13 | 22 |
| hepatobiliary system | 6.90e-13 | 22 |
| foregut-midgut junction | 6.90e-13 | 22 |
| hepatic diverticulum | 6.90e-13 | 22 |
| liver primordium | 6.90e-13 | 22 |
| septum transversum | 6.90e-13 | 22 |
| liver bud | 6.90e-13 | 22 |
| digestive tract diverticulum | 2.24e-12 | 23 |
| sac | 2.24e-12 | 23 |
| exocrine gland | 1.80e-11 | 25 |
| exocrine system | 1.80e-11 | 25 |
| vessel | 3.64e-07 | 5 |
| epithelial tube open at both ends | 3.64e-07 | 5 |
| blood vessel | 3.64e-07 | 5 |
| vasculature | 3.64e-07 | 5 |
| vascular system | 3.64e-07 | 5 |
| blood vasculature | 3.64e-07 | 5 |
| vascular cord | 3.64e-07 | 5 |
| trunk mesenchyme | 8.07e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
