FFCP PHASE1:Hg19::chr12:121974134..121974155,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84678|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13610|TSSclassifier=S|UniProt=F5H7T7|association_with_transcript=0bp_to_ENST00000541511_5end|description=CAGE_peak_13_at_KDM2B_5end|id=chr12:121974134..121974155,-|ontology_enrichment_celltype=CL:0000945!8.02e-25!24;CL:0000826!8.02e-25!24;CL:0000542!7.08e-18!53;CL:0000051!7.08e-18!53;CL:0000838!4.88e-17!52;CL:0000236!3.49e-14!14|ontology_enrichment_celltype_v019=CL:0000945;1.95e-54;24!CL:0000236;8.20e-26;13!CL:0000542;9.27e-18;53|ontology_enrichment_celltype_v019_2=CL:0000945,1.11e-54,24;CL:0000826,1.11e-54,24;CL:0000542,5.99e-25,53;CL:0000051,5.99e-25,53;CL:0000236,4.89e-24,14;CL:0000838,7.61e-23,52;CL:0002087,5.74e-09,115;CL:0000738,7.54e-08,136;CL:0002031,1.93e-07,120|ontology_enrichment_development_v019=CL:0000051;9.27e-18;53!UBERON:0006215;1.88e-13;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;5.13e-15;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.26e-15,10|ontology_enrichment_uberon=UBERON:0007023!2.32e-28!115;UBERON:0001049!1.40e-22!57;UBERON:0005068!1.40e-22!57;UBERON:0006241!1.40e-22!57;UBERON:0007135!1.40e-22!57;UBERON:0002616!1.82e-21!59;UBERON:0002780!9.75e-21!41;UBERON:0001890!9.75e-21!41;UBERON:0006240!9.75e-21!41;UBERON:0003080!5.57e-20!42;UBERON:0000955!1.58e-19!69;UBERON:0006238!1.58e-19!69;UBERON:0001017!4.53e-19!82;UBERON:0001893!1.25e-18!34;UBERON:0002020!1.42e-18!34;UBERON:0003528!1.42e-18!34;UBERON:0005743!2.22e-18!86;UBERON:0001869!9.24e-18!32;UBERON:0002791!9.96e-18!33;UBERON:0000073!7.29e-16!94;UBERON:0001016!7.29e-16!94;UBERON:0003075!3.21e-15!86;UBERON:0007284!3.21e-15!86;UBERON:0001950!7.67e-15!20;UBERON:0002619!9.90e-15!22;UBERON:0003056!3.72e-14!61;UBERON:0002346!6.76e-14!90;UBERON:0000956!1.79e-13!25;UBERON:0000203!1.79e-13!25;UBERON:0000153!1.85e-10!129;UBERON:0007811!1.85e-10!129;UBERON:0000033!1.67e-09!123;UBERON:0002420!1.99e-07!9;UBERON:0007245!1.99e-07!9;UBERON:0010009!1.99e-07!9;UBERON:0010011!1.99e-07!9;UBERON:0000454!1.99e-07!9;UBERON:0001871!2.08e-07!7|ontology_enrichment_uberon_v019=UBERON:0001950;2.20e-11;20!UBERON:0002619;2.77e-10;22!UBERON:0001871;8.87e-10;6!UBERON:0001876;3.51e-09;2!UBERON:0000956;5.92e-09;25!UBERON:0000203;5.92e-09;25!UBERON:0002791;1.19e-07;32!UBERON:0001869;1.19e-07;32!UBERON:0003528;2.73e-07;34!UBERON:0002020;2.73e-07;34!UBERON:0002037;6.12e-07;6!UBERON:0002780;6.85e-07;41!UBERON:0001890;6.85e-07;41!UBERON:0000073;6.98e-07;53!UBERON:0002616;6.98e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.18e-11,20;UBERON:0002619,2.74e-10,22;UBERON:0000073,3.43e-10,53;UBERON:0002616,3.43e-10,53;UBERON:0001871,5.99e-10,6;UBERON:0001049,1.63e-09,56;UBERON:0005068,1.63e-09,56;UBERON:0006241,1.63e-09,56;UBERON:0007135,1.63e-09,56;UBERON:0001876,2.86e-09,2;UBERON:0000956,5.88e-09,25;UBERON:0000203,5.88e-09,25;UBERON:0000955,1.24e-08,68;UBERON:0006238,1.24e-08,68;UBERON:0002791,1.45e-08,32;UBERON:0001869,1.45e-08,32;UBERON:0003528,5.48e-08,34;UBERON:0002020,5.48e-08,34;UBERON:0001893,5.48e-08,34;UBERON:0001017,5.76e-08,81;UBERON:0002780,6.11e-08,41;UBERON:0001890,6.11e-08,41;UBERON:0003080,6.11e-08,41;UBERON:0006240,6.11e-08,41;UBERON:0002037,5.48e-07,6;UBERON:0006215,5.48e-07,6;UBERON:0001016,6.94e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,2.52164238968239,1.72411237844886,2.44003422072406,0,0,0,0,0,0,2.32401601740905,4.69158467208491,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.82297027883492,3.55803701545422,1.70692089026603,3.60356388332411,1.14950487990897,0.661044872784862,0.954053754535364,2.27685187643779,0.587237189370939,2.6759125968766,0,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13610 | |||
|TSSclassifier=S | |||
|UniProt=F5H7T7 | |||
|association_with_transcript=0bp_to_ENST00000541511_5end | |||
|description=CAGE_peak_13_at_KDM2B_5end | |||
|id=chr12:121974134..121974155,- | |||
|ontology_enrichment_celltype=CL:0000945!8.02e-25!24;CL:0000826!8.02e-25!24;CL:0000542!7.08e-18!53;CL:0000051!7.08e-18!53;CL:0000838!4.88e-17!52;CL:0000236!3.49e-14!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.95e-54;24!CL:0000236;8.20e-26;13!CL:0000542;9.27e-18;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.11e-54,24;CL:0000826,1.11e-54,24;CL:0000542,5.99e-25,53;CL:0000051,5.99e-25,53;CL:0000236,4.89e-24,14;CL:0000838,7.61e-23,52;CL:0002087,5.74e-09,115;CL:0000738,7.54e-08,136;CL:0002031,1.93e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;9.27e-18;53!UBERON:0006215;1.88e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.13e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.26e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-28!115;UBERON:0001049!1.40e-22!57;UBERON:0005068!1.40e-22!57;UBERON:0006241!1.40e-22!57;UBERON:0007135!1.40e-22!57;UBERON:0002616!1.82e-21!59;UBERON:0002780!9.75e-21!41;UBERON:0001890!9.75e-21!41;UBERON:0006240!9.75e-21!41;UBERON:0003080!5.57e-20!42;UBERON:0000955!1.58e-19!69;UBERON:0006238!1.58e-19!69;UBERON:0001017!4.53e-19!82;UBERON:0001893!1.25e-18!34;UBERON:0002020!1.42e-18!34;UBERON:0003528!1.42e-18!34;UBERON:0005743!2.22e-18!86;UBERON:0001869!9.24e-18!32;UBERON:0002791!9.96e-18!33;UBERON:0000073!7.29e-16!94;UBERON:0001016!7.29e-16!94;UBERON:0003075!3.21e-15!86;UBERON:0007284!3.21e-15!86;UBERON:0001950!7.67e-15!20;UBERON:0002619!9.90e-15!22;UBERON:0003056!3.72e-14!61;UBERON:0002346!6.76e-14!90;UBERON:0000956!1.79e-13!25;UBERON:0000203!1.79e-13!25;UBERON:0000153!1.85e-10!129;UBERON:0007811!1.85e-10!129;UBERON:0000033!1.67e-09!123;UBERON:0002420!1.99e-07!9;UBERON:0007245!1.99e-07!9;UBERON:0010009!1.99e-07!9;UBERON:0010011!1.99e-07!9;UBERON:0000454!1.99e-07!9;UBERON:0001871!2.08e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.20e-11;20!UBERON:0002619;2.77e-10;22!UBERON:0001871;8.87e-10;6!UBERON:0001876;3.51e-09;2!UBERON:0000956;5.92e-09;25!UBERON:0000203;5.92e-09;25!UBERON:0002791;1.19e-07;32!UBERON:0001869;1.19e-07;32!UBERON:0003528;2.73e-07;34!UBERON:0002020;2.73e-07;34!UBERON:0002037;6.12e-07;6!UBERON:0002780;6.85e-07;41!UBERON:0001890;6.85e-07;41!UBERON:0000073;6.98e-07;53!UBERON:0002616;6.98e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.18e-11,20;UBERON:0002619,2.74e-10,22;UBERON:0000073,3.43e-10,53;UBERON:0002616,3.43e-10,53;UBERON:0001871,5.99e-10,6;UBERON:0001049,1.63e-09,56;UBERON:0005068,1.63e-09,56;UBERON:0006241,1.63e-09,56;UBERON:0007135,1.63e-09,56;UBERON:0001876,2.86e-09,2;UBERON:0000956,5.88e-09,25;UBERON:0000203,5.88e-09,25;UBERON:0000955,1.24e-08,68;UBERON:0006238,1.24e-08,68;UBERON:0002791,1.45e-08,32;UBERON:0001869,1.45e-08,32;UBERON:0003528,5.48e-08,34;UBERON:0002020,5.48e-08,34;UBERON:0001893,5.48e-08,34;UBERON:0001017,5.76e-08,81;UBERON:0002780,6.11e-08,41;UBERON:0001890,6.11e-08,41;UBERON:0003080,6.11e-08,41;UBERON:0006240,6.11e-08,41;UBERON:0002037,5.48e-07,6;UBERON:0006215,5.48e-07,6;UBERON:0001016,6.94e-07,89 | |||
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| |||
|short_description=p13@KDM2B | |||
}} |
Revision as of 21:21, 10 September 2013
Short description: | p13@KDM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_KDM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000541511_5end |
EntrezGene: | KDM2B |
HGNC: | 13610 |
UniProt: | F5H7T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.11e-54 | 24 |
pro-B cell | 1.11e-54 | 24 |
lymphocyte | 5.99e-25 | 53 |
common lymphoid progenitor | 5.99e-25 | 53 |
B cell | 4.89e-24 | 14 |
lymphoid lineage restricted progenitor cell | 7.61e-23 | 52 |
nongranular leukocyte | 5.74e-09 | 115 |
leukocyte | 7.54e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.93e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.18e-11 | 20 |
regional part of cerebral cortex | 2.74e-10 | 22 |
regional part of nervous system | 3.43e-10 | 53 |
regional part of brain | 3.43e-10 | 53 |
temporal lobe | 5.99e-10 | 6 |
neural tube | 1.63e-09 | 56 |
neural rod | 1.63e-09 | 56 |
future spinal cord | 1.63e-09 | 56 |
neural keel | 1.63e-09 | 56 |
amygdala | 2.86e-09 | 2 |
cerebral cortex | 5.88e-09 | 25 |
pallium | 5.88e-09 | 25 |
brain | 1.24e-08 | 68 |
future brain | 1.24e-08 | 68 |
regional part of telencephalon | 1.45e-08 | 32 |
cerebral hemisphere | 1.45e-08 | 32 |
brain grey matter | 5.48e-08 | 34 |
gray matter | 5.48e-08 | 34 |
telencephalon | 5.48e-08 | 34 |
central nervous system | 5.76e-08 | 81 |
regional part of forebrain | 6.11e-08 | 41 |
forebrain | 6.11e-08 | 41 |
anterior neural tube | 6.11e-08 | 41 |
future forebrain | 6.11e-08 | 41 |
cerebellum | 5.48e-07 | 6 |
rhombic lip | 5.48e-07 | 6 |
nervous system | 6.94e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.26e-15 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.