FFCP PHASE1:Hg19::chr15:86123747..86123770,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=371|TSSclassifier=S|UniProt=|association_with_transcript=-138bp_to_BC000269_5end|coexpression_cluster_id=C0|description=CAGE_peak_6_at_AKAP13_5end|id=chr15:86123747..86123770,+|ontology_enrichment_celltype=CL:0000557!6.31e-45!71;CL:0000766!2.78e-44!76;CL:0002009!5.24e-41!65;CL:0000839!1.70e-40!70;CL:0002194!2.80e-39!63;CL:0000576!2.80e-39!63;CL:0000040!2.80e-39!63;CL:0000559!2.80e-39!63;CL:0002057!1.14e-36!42;CL:0000860!8.50e-34!45;CL:0000738!9.05e-29!140;CL:0000763!7.78e-28!112;CL:0000049!7.78e-28!112;CL:0002031!3.30e-22!124;CL:0002087!2.11e-20!119;CL:0000037!3.38e-19!172;CL:0000566!3.38e-19!172;CL:0002032!7.56e-17!165;CL:0000837!7.56e-17!165;CL:0000988!2.81e-16!182;CL:0000451!1.49e-08!10;CL:0002393!3.72e-08!9;CL:0002397!3.72e-08!9;CL:0000990!4.01e-07!8|ontology_enrichment_celltype_v019=CL:0000860;3.87e-43;33!CL:0002057;3.87e-43;33!CL:0000473;3.30e-41;39!CL:0000234;3.30e-41;39!CL:0000576;4.96e-36;48!CL:0000766;5.40e-31;69!CL:0000451;6.03e-13;10!CL:0000763;1.56e-12;100!CL:0000990;1.29e-10;8!CL:0000738;1.78e-10;136!CL:0002393;1.11e-08;6!CL:0002397;1.11e-08;6!CL:0002087;1.73e-08;104!CL:0000840;3.10e-08;5!CL:0000235;1.05e-07;6|ontology_enrichment_celltype_v019_2=CL:0000557,1.09e-73,67;CL:0000766,2.26e-71,72;CL:0002009,2.48e-67,61;CL:0000839,4.20e-67,66;CL:0000473,6.46e-65,48;CL:0000234,6.46e-65,48;CL:0002194,1.70e-64,59;CL:0000576,1.70e-64,59;CL:0000040,1.70e-64,59;CL:0000559,1.70e-64,59;CL:0000860,1.50e-58,42;CL:0002057,1.50e-58,42;CL:0000763,1.35e-49,108;CL:0000049,1.35e-49,108;CL:0000738,2.38e-41,136;CL:0002031,1.48e-31,120;CL:0000037,8.25e-30,168;CL:0002087,1.71e-28,115;CL:0000988,4.60e-27,177;CL:0002032,1.46e-26,161;CL:0000837,1.46e-26,161;CL:0000451,7.10e-13,10;CL:0002393,3.12e-12,9;CL:0002397,3.12e-12,9;CL:0000990,1.44e-10,8;CL:0000840,3.14e-08,5;CL:0001029,3.14e-08,5;CL:0000235,1.25e-07,6|ontology_enrichment_development_v019=CL:0002057;6.78e-42;42!CL:0000049;1.83e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.56e-38!80;UBERON:0002390!2.08e-35!102;UBERON:0003061!2.08e-35!102;UBERON:0001474!1.18e-33!86;UBERON:0002193!3.05e-31!112;UBERON:0007023!1.03e-29!115;UBERON:0002405!5.56e-29!115;UBERON:0004765!3.24e-24!101;UBERON:0001434!3.24e-24!101;UBERON:0003081!3.99e-16!216;UBERON:0000062!9.17e-12!511;UBERON:0002204!1.08e-11!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.34e-62,76;UBERON:0001474,3.46e-56,82;UBERON:0002390,7.30e-55,98;UBERON:0003061,7.30e-55,98;UBERON:0002405,9.92e-52,93;UBERON:0004765,3.00e-49,90;UBERON:0002193,5.03e-49,108;UBERON:0001434,3.72e-42,100;UBERON:0003081,3.01e-25,203;UBERON:0002204,1.25e-20,167;UBERON:0007023,5.27e-14,114;UBERON:0000926,4.54e-13,315;UBERON:0004120,4.54e-13,315;UBERON:0006603,4.54e-13,315;UBERON:0000923,3.77e-07,560;UBERON:0010316,3.77e-07,560;UBERON:0005291,3.77e-07,560;UBERON:0006598,3.77e-07,560;UBERON:0010317,3.77e-07,560;UBERON:0002532,3.77e-07,560;UBERON:0005423,5.84e-07,581;UBERON:0002050,6.82e-07,564|phase1_expression=0,0,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,16.521299627654,16.8884935162774,14.3978994683951,0,0,0,0,0,0.587200878669695,26.5917796095301,30.6833004629317,23.437174037312,4.03047853631864,5.50619232232265,5.92423805558629,52.1979677218637,43.8336094679019,51.1852369106292,47.880381602571,40.7056209141608,38.7132963618879,33.0846251170473,31.2516061965503,28.3778675866302,54.1250718756491,45.1839278508678,51.4620649058499,63.4376684258578,64.6787575637095,51.9111249068145,80.8061475859183,78.948540660719,86.9498491086696,31.335873517738,21.3426113655146,32.3930810404848,61.8145678278884,52.1994406715849,47.3344909236637,25.6273638561878,25.5526630025899,27.8001721222549,24.8213796079681,47.1395374064083,46.8364333412509,8.23895616616573,6.37812899895131,5.66078342872615,6.62738923764321,8.56008289196586,7.23265140136861,9.4054205434612,14.5209174355336,10.959849225878,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,3.36305137788922,0.790152254325231,0.196709770113833,0,0.411202997999018,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0,0,2.16115474571226,0,0,5.8418530857843,4.87563264437948,5.05240249971688,12.6400030881831,13.1558829479429,8.17206502925043,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41157401133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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=371 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-138bp_to_BC000269_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_AKAP13_5end | |||
|id=chr15:86123747..86123770,+ | |||
|ontology_enrichment_celltype=CL:0000557!6.31e-45!71;CL:0000766!2.78e-44!76;CL:0002009!5.24e-41!65;CL:0000839!1.70e-40!70;CL:0002194!2.80e-39!63;CL:0000576!2.80e-39!63;CL:0000040!2.80e-39!63;CL:0000559!2.80e-39!63;CL:0002057!1.14e-36!42;CL:0000860!8.50e-34!45;CL:0000738!9.05e-29!140;CL:0000763!7.78e-28!112;CL:0000049!7.78e-28!112;CL:0002031!3.30e-22!124;CL:0002087!2.11e-20!119;CL:0000037!3.38e-19!172;CL:0000566!3.38e-19!172;CL:0002032!7.56e-17!165;CL:0000837!7.56e-17!165;CL:0000988!2.81e-16!182;CL:0000451!1.49e-08!10;CL:0002393!3.72e-08!9;CL:0002397!3.72e-08!9;CL:0000990!4.01e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.87e-43;33!CL:0002057;3.87e-43;33!CL:0000473;3.30e-41;39!CL:0000234;3.30e-41;39!CL:0000576;4.96e-36;48!CL:0000766;5.40e-31;69!CL:0000451;6.03e-13;10!CL:0000763;1.56e-12;100!CL:0000990;1.29e-10;8!CL:0000738;1.78e-10;136!CL:0002393;1.11e-08;6!CL:0002397;1.11e-08;6!CL:0002087;1.73e-08;104!CL:0000840;3.10e-08;5!CL:0000235;1.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.09e-73,67;CL:0000766,2.26e-71,72;CL:0002009,2.48e-67,61;CL:0000839,4.20e-67,66;CL:0000473,6.46e-65,48;CL:0000234,6.46e-65,48;CL:0002194,1.70e-64,59;CL:0000576,1.70e-64,59;CL:0000040,1.70e-64,59;CL:0000559,1.70e-64,59;CL:0000860,1.50e-58,42;CL:0002057,1.50e-58,42;CL:0000763,1.35e-49,108;CL:0000049,1.35e-49,108;CL:0000738,2.38e-41,136;CL:0002031,1.48e-31,120;CL:0000037,8.25e-30,168;CL:0002087,1.71e-28,115;CL:0000988,4.60e-27,177;CL:0002032,1.46e-26,161;CL:0000837,1.46e-26,161;CL:0000451,7.10e-13,10;CL:0002393,3.12e-12,9;CL:0002397,3.12e-12,9;CL:0000990,1.44e-10,8;CL:0000840,3.14e-08,5;CL:0001029,3.14e-08,5;CL:0000235,1.25e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-42;42!CL:0000049;1.83e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.56e-38!80;UBERON:0002390!2.08e-35!102;UBERON:0003061!2.08e-35!102;UBERON:0001474!1.18e-33!86;UBERON:0002193!3.05e-31!112;UBERON:0007023!1.03e-29!115;UBERON:0002405!5.56e-29!115;UBERON:0004765!3.24e-24!101;UBERON:0001434!3.24e-24!101;UBERON:0003081!3.99e-16!216;UBERON:0000062!9.17e-12!511;UBERON:0002204!1.08e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.34e-62,76;UBERON:0001474,3.46e-56,82;UBERON:0002390,7.30e-55,98;UBERON:0003061,7.30e-55,98;UBERON:0002405,9.92e-52,93;UBERON:0004765,3.00e-49,90;UBERON:0002193,5.03e-49,108;UBERON:0001434,3.72e-42,100;UBERON:0003081,3.01e-25,203;UBERON:0002204,1.25e-20,167;UBERON:0007023,5.27e-14,114;UBERON:0000926,4.54e-13,315;UBERON:0004120,4.54e-13,315;UBERON:0006603,4.54e-13,315;UBERON:0000923,3.77e-07,560;UBERON:0010316,3.77e-07,560;UBERON:0005291,3.77e-07,560;UBERON:0006598,3.77e-07,560;UBERON:0010317,3.77e-07,560;UBERON:0002532,3.77e-07,560;UBERON:0005423,5.84e-07,581;UBERON:0002050,6.82e-07,564 | |||
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| |||
|short_description=p6@AKAP13 | |||
}} |
Revision as of 08:40, 11 September 2013
Short description: | p6@AKAP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_AKAP13_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -138bp_to_BC000269_5end |
EntrezGene: | AKAP13 |
HGNC: | 371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.09e-73 | 67 |
myeloid leukocyte | 2.26e-71 | 72 |
macrophage dendritic cell progenitor | 2.48e-67 | 61 |
myeloid lineage restricted progenitor cell | 4.20e-67 | 66 |
defensive cell | 6.46e-65 | 48 |
phagocyte | 6.46e-65 | 48 |
monopoietic cell | 1.70e-64 | 59 |
monocyte | 1.70e-64 | 59 |
monoblast | 1.70e-64 | 59 |
promonocyte | 1.70e-64 | 59 |
classical monocyte | 1.50e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-58 | 42 |
myeloid cell | 1.35e-49 | 108 |
common myeloid progenitor | 1.35e-49 | 108 |
leukocyte | 2.38e-41 | 136 |
hematopoietic lineage restricted progenitor cell | 1.48e-31 | 120 |
hematopoietic stem cell | 8.25e-30 | 168 |
nongranular leukocyte | 1.71e-28 | 115 |
hematopoietic cell | 4.60e-27 | 177 |
hematopoietic oligopotent progenitor cell | 1.46e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-26 | 161 |
dendritic cell | 7.10e-13 | 10 |
intermediate monocyte | 3.12e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.12e-12 | 9 |
conventional dendritic cell | 1.44e-10 | 8 |
immature conventional dendritic cell | 3.14e-08 | 5 |
common dendritic progenitor | 3.14e-08 | 5 |
macrophage | 1.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.34e-62 | 76 |
bone element | 3.46e-56 | 82 |
hematopoietic system | 7.30e-55 | 98 |
blood island | 7.30e-55 | 98 |
immune system | 9.92e-52 | 93 |
skeletal element | 3.00e-49 | 90 |
hemolymphoid system | 5.03e-49 | 108 |
skeletal system | 3.72e-42 | 100 |
lateral plate mesoderm | 3.01e-25 | 203 |
musculoskeletal system | 1.25e-20 | 167 |
adult organism | 5.27e-14 | 114 |
mesoderm | 4.54e-13 | 315 |
mesoderm-derived structure | 4.54e-13 | 315 |
presumptive mesoderm | 4.54e-13 | 315 |
germ layer | 3.77e-07 | 560 |
germ layer / neural crest | 3.77e-07 | 560 |
embryonic tissue | 3.77e-07 | 560 |
presumptive structure | 3.77e-07 | 560 |
germ layer / neural crest derived structure | 3.77e-07 | 560 |
epiblast (generic) | 3.77e-07 | 560 |
developing anatomical structure | 5.84e-07 | 581 |
embryonic structure | 6.82e-07 | 564 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.