FFCP PHASE1:Hg19::chr17:17480334..17480356,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10400|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=8830|TSSclassifier=S|UniProt=Q9UBM1|association_with_transcript=-8bp_to_CR457099_5end|coexpression_cluster_id=C220|description=CAGE_peak_9_at_PEMT_5end|id=chr17:17480334..17480356,-|ontology_enrichment_celltype=CL:0000136!2.65e-18!15;CL:0000325!2.61e-10!39|ontology_enrichment_celltype_v019=CL:0000136;2.00e-65;13!CL:0002521;3.15e-19;3!CL:0002615;5.79e-19;3!CL:0002617;3.45e-13;2!CL:0000650;1.18e-12;2!CL:1000500;1.18e-12;2!CL:1000618;1.18e-12;2!CL:1001318;1.18e-12;2!CL:0002173;1.18e-12;2!CL:1000746;5.67e-08;7!CL:1000612;5.67e-08;7!CL:0000669;9.51e-07;4|ontology_enrichment_celltype_v019_2=CL:0000136,2.31e-56,15;CL:0002521,3.06e-19,3;CL:0002615,6.34e-19,3;CL:0002617,3.46e-13,2;CL:0000650,9.60e-13,2;CL:1000500,9.60e-13,2;CL:1000618,9.60e-13,2;CL:1001318,9.60e-13,2;CL:0002173,9.60e-13,2;CL:1000746,4.90e-08,7;CL:1000612,4.90e-08,7;CL:0000669,8.59e-07,4|ontology_enrichment_development_v019=UBERON:0007297;5.60e-13;2!UBERON:0000358;3.62e-07;1!UBERON:0005754;3.62e-07;1!UBERON:0004874;5.67e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!3.12e-07!11|ontology_enrichment_uberon_v019=UBERON:0002190;3.15e-19;3!UBERON:0003135;1.05e-18;11!UBERON:0006947;3.10e-18;3!UBERON:0004054;3.10e-18;3!UBERON:0005904;8.08e-14;4!UBERON:0003567;1.18e-12;2!UBERON:0003838;1.18e-12;2!UBERON:0003586;1.18e-12;2!UBERON:0005169;1.18e-12;2!UBERON:0002321;1.18e-12;2!UBERON:0005215;1.18e-12;2!UBERON:0002303;1.18e-12;2!UBERON:0002319;1.18e-12;2!UBERON:0003101;3.73e-12;22!UBERON:0000079;3.73e-12;22!UBERON:0002072;9.56e-12;5!UBERON:0001013;8.26e-11;14!UBERON:0003688;9.77e-10;6!UBERON:0002358;9.77e-10;6!UBERON:0003684;9.77e-10;6!UBERON:0001178;9.77e-10;6!UBERON:0000074;5.67e-08;7!UBERON:0001229;5.67e-08;7!UBERON:0001301;1.74e-07;1!UBERON:0000473;3.27e-07;8!UBERON:0005795;3.62e-07;1!UBERON:0000998;3.62e-07;1!UBERON:0006868;3.62e-07;1!UBERON:0001000;5.67e-07;1!UBERON:0000989;5.67e-07;1!UBERON:0008811;5.67e-07;1!UBERON:0005352;5.67e-07;1!UBERON:0003891;9.51e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.06e-19,3;UBERON:0003135,1.01e-18,11;UBERON:0004876,1.14e-18,11;UBERON:0006947,3.39e-18,3;UBERON:0004054,3.39e-18,3;UBERON:0000080,3.15e-16,9;UBERON:0002120,3.15e-16,9;UBERON:0004875,3.15e-16,9;UBERON:0005721,3.15e-16,9;UBERON:0005754,3.15e-16,9;UBERON:0007297,3.15e-16,9;UBERON:0005904,8.63e-14,4;UBERON:0003567,9.60e-13,2;UBERON:0003838,9.60e-13,2;UBERON:0003586,9.60e-13,2;UBERON:0005169,9.60e-13,2;UBERON:0002321,9.60e-13,2;UBERON:0005215,9.60e-13,2;UBERON:0002303,9.60e-13,2;UBERON:0002319,9.60e-13,2;UBERON:0003101,3.73e-12,22;UBERON:0000079,3.73e-12,22;UBERON:0003887,4.00e-12,12;UBERON:0005103,5.24e-12,8;UBERON:0000083,5.24e-12,8;UBERON:0009201,5.24e-12,8;UBERON:0006553,5.24e-12,8;UBERON:0003074,5.24e-12,8;UBERON:0003060,5.24e-12,8;UBERON:0002072,9.40e-12,5;UBERON:0001013,8.01e-11,14;UBERON:0000058,1.50e-10,19;UBERON:0003688,1.02e-09,6;UBERON:0002358,1.02e-09,6;UBERON:0003684,1.02e-09,6;UBERON:0001178,1.02e-09,6;UBERON:0003064,2.41e-09,28;UBERON:0003886,2.91e-09,54;UBERON:0010532,4.90e-08,7;UBERON:0000074,4.90e-08,7;UBERON:0001229,4.90e-08,7;UBERON:0001230,4.90e-08,7;UBERON:0003220,4.90e-08,7;UBERON:0005749,4.90e-08,7;UBERON:0004199,4.90e-08,7;UBERON:0004209,4.90e-08,7;UBERON:0004198,4.90e-08,7;UBERON:0002553,5.31e-08,61;UBERON:0001301,1.74e-07,1;UBERON:0000473,3.04e-07,8;UBERON:0000998,3.21e-07,1;UBERON:0006868,3.21e-07,1;UBERON:0000989,5.19e-07,1;UBERON:0008811,5.19e-07,1;UBERON:0006258,5.19e-07,1;UBERON:0005876,5.19e-07,1;UBERON:0004874,5.19e-07,1;UBERON:0001000,6.97e-07,1;UBERON:0005352,6.97e-07,1;UBERON:0003891,8.59e-07,4|phase1_expression=2.36181893051724,33.3996817269934,5.21531295155093,7.00513088471913,22.7950158157917,0.872338524100369,65.8579683237607,13.8978372153903,6.26845507679612,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,2.0956652079634,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8830 | |||
|TSSclassifier=S | |||
|UniProt=Q9UBM1 | |||
|association_with_transcript=-8bp_to_CR457099_5end | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_9_at_PEMT_5end | |||
|id=chr17:17480334..17480356,- | |||
|ontology_enrichment_celltype=CL:0000136!2.65e-18!15;CL:0000325!2.61e-10!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.00e-65;13!CL:0002521;3.15e-19;3!CL:0002615;5.79e-19;3!CL:0002617;3.45e-13;2!CL:0000650;1.18e-12;2!CL:1000500;1.18e-12;2!CL:1000618;1.18e-12;2!CL:1001318;1.18e-12;2!CL:0002173;1.18e-12;2!CL:1000746;5.67e-08;7!CL:1000612;5.67e-08;7!CL:0000669;9.51e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.31e-56,15;CL:0002521,3.06e-19,3;CL:0002615,6.34e-19,3;CL:0002617,3.46e-13,2;CL:0000650,9.60e-13,2;CL:1000500,9.60e-13,2;CL:1000618,9.60e-13,2;CL:1001318,9.60e-13,2;CL:0002173,9.60e-13,2;CL:1000746,4.90e-08,7;CL:1000612,4.90e-08,7;CL:0000669,8.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.60e-13;2!UBERON:0000358;3.62e-07;1!UBERON:0005754;3.62e-07;1!UBERON:0004874;5.67e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.12e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.15e-19;3!UBERON:0003135;1.05e-18;11!UBERON:0006947;3.10e-18;3!UBERON:0004054;3.10e-18;3!UBERON:0005904;8.08e-14;4!UBERON:0003567;1.18e-12;2!UBERON:0003838;1.18e-12;2!UBERON:0003586;1.18e-12;2!UBERON:0005169;1.18e-12;2!UBERON:0002321;1.18e-12;2!UBERON:0005215;1.18e-12;2!UBERON:0002303;1.18e-12;2!UBERON:0002319;1.18e-12;2!UBERON:0003101;3.73e-12;22!UBERON:0000079;3.73e-12;22!UBERON:0002072;9.56e-12;5!UBERON:0001013;8.26e-11;14!UBERON:0003688;9.77e-10;6!UBERON:0002358;9.77e-10;6!UBERON:0003684;9.77e-10;6!UBERON:0001178;9.77e-10;6!UBERON:0000074;5.67e-08;7!UBERON:0001229;5.67e-08;7!UBERON:0001301;1.74e-07;1!UBERON:0000473;3.27e-07;8!UBERON:0005795;3.62e-07;1!UBERON:0000998;3.62e-07;1!UBERON:0006868;3.62e-07;1!UBERON:0001000;5.67e-07;1!UBERON:0000989;5.67e-07;1!UBERON:0008811;5.67e-07;1!UBERON:0005352;5.67e-07;1!UBERON:0003891;9.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.06e-19,3;UBERON:0003135,1.01e-18,11;UBERON:0004876,1.14e-18,11;UBERON:0006947,3.39e-18,3;UBERON:0004054,3.39e-18,3;UBERON:0000080,3.15e-16,9;UBERON:0002120,3.15e-16,9;UBERON:0004875,3.15e-16,9;UBERON:0005721,3.15e-16,9;UBERON:0005754,3.15e-16,9;UBERON:0007297,3.15e-16,9;UBERON:0005904,8.63e-14,4;UBERON:0003567,9.60e-13,2;UBERON:0003838,9.60e-13,2;UBERON:0003586,9.60e-13,2;UBERON:0005169,9.60e-13,2;UBERON:0002321,9.60e-13,2;UBERON:0005215,9.60e-13,2;UBERON:0002303,9.60e-13,2;UBERON:0002319,9.60e-13,2;UBERON:0003101,3.73e-12,22;UBERON:0000079,3.73e-12,22;UBERON:0003887,4.00e-12,12;UBERON:0005103,5.24e-12,8;UBERON:0000083,5.24e-12,8;UBERON:0009201,5.24e-12,8;UBERON:0006553,5.24e-12,8;UBERON:0003074,5.24e-12,8;UBERON:0003060,5.24e-12,8;UBERON:0002072,9.40e-12,5;UBERON:0001013,8.01e-11,14;UBERON:0000058,1.50e-10,19;UBERON:0003688,1.02e-09,6;UBERON:0002358,1.02e-09,6;UBERON:0003684,1.02e-09,6;UBERON:0001178,1.02e-09,6;UBERON:0003064,2.41e-09,28;UBERON:0003886,2.91e-09,54;UBERON:0010532,4.90e-08,7;UBERON:0000074,4.90e-08,7;UBERON:0001229,4.90e-08,7;UBERON:0001230,4.90e-08,7;UBERON:0003220,4.90e-08,7;UBERON:0005749,4.90e-08,7;UBERON:0004199,4.90e-08,7;UBERON:0004209,4.90e-08,7;UBERON:0004198,4.90e-08,7;UBERON:0002553,5.31e-08,61;UBERON:0001301,1.74e-07,1;UBERON:0000473,3.04e-07,8;UBERON:0000998,3.21e-07,1;UBERON:0006868,3.21e-07,1;UBERON:0000989,5.19e-07,1;UBERON:0008811,5.19e-07,1;UBERON:0006258,5.19e-07,1;UBERON:0005876,5.19e-07,1;UBERON:0004874,5.19e-07,1;UBERON:0001000,6.97e-07,1;UBERON:0005352,6.97e-07,1;UBERON:0003891,8.59e-07,4 | |||
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|short_description=p9@PEMT | |||
}} |
Revision as of 12:26, 11 September 2013
Short description: | p9@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PEMT_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | -8bp_to_CR457099_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.31e-56 | 15 |
subcutaneous fat cell | 3.06e-19 | 3 |
adipocyte of omentum tissue | 6.34e-19 | 3 |
adipocyte of breast | 3.46e-13 | 2 |
mesangial cell | 9.60e-13 | 2 |
kidney interstitial cell | 9.60e-13 | 2 |
juxtaglomerular complex cell | 9.60e-13 | 2 |
renal interstitial pericyte | 9.60e-13 | 2 |
extraglomerular mesangial cell | 9.60e-13 | 2 |
glomerular cell | 4.90e-08 | 7 |
kidney corpuscule cell | 4.90e-08 | 7 |
pericyte cell | 8.59e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.