FFCP PHASE1:Mm9::chr10:13685585..13685645,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15273|HGNC=|MCL_coexpression_id=2539|UniProt=Q3UHF7|association_with_transcript=-237bp_to_uc007elg.1_5end|description=CAGE_peak_2_at_Hivep2_5end|id=chr10:13685585..13685645,+|ontology_enrichment_celltype=CL:0000791!5.67e-07!9;CL:0000789!5.67e-07!9;CL:0002420!5.67e-07!9;CL:0002419!5.67e-07!9;CL:0000790!5.67e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,5.12e-07,9;CL:0000789,5.12e-07,9;CL:0002420,5.12e-07,9;CL:0002419,5.12e-07,9;CL:0000790,5.12e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.84e-13!34;UBERON:0000064!3.91e-12!99;UBERON:0002791!3.03e-11!29;UBERON:0003528!3.03e-11!29;UBERON:0001893!3.03e-11!29;UBERON:0000073!4.26e-11!75;UBERON:0001016!4.26e-11!75;UBERON:0001017!5.55e-11!73;UBERON:0005743!5.55e-11!73;UBERON:0000956!6.44e-11!21;UBERON:0001869!6.44e-11!21;UBERON:0000203!6.44e-11!21;UBERON:0001049!2.02e-10!52;UBERON:0005068!2.02e-10!52;UBERON:0006241!2.02e-10!52;UBERON:0007135!2.02e-10!52;UBERON:0000955!4.78e-10!50;UBERON:0006238!4.78e-10!50;UBERON:0002616!1.64e-09!49;UBERON:0002780!3.91e-09!39;UBERON:0001890!3.91e-09!39;UBERON:0006240!3.91e-09!39;UBERON:0007811!4.40e-09!86;UBERON:0003080!4.93e-09!40;UBERON:0000153!5.11e-09!94;UBERON:0002619!1.28e-08!17;UBERON:0002021!5.57e-08!10;UBERON:0000411!5.57e-08!10;UBERON:0001950!5.57e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.47e-13,34;UBERON:0003528,3.53e-11,29;UBERON:0002791,3.53e-11,29;UBERON:0001893,3.53e-11,29;UBERON:0000073,5.81e-11,54;UBERON:0001016,6.44e-11,75;UBERON:0000956,7.92e-11,21;UBERON:0001869,7.92e-11,21;UBERON:0000203,7.92e-11,21;UBERON:0001017,8.43e-11,73;UBERON:0001049,3.69e-10,52;UBERON:0005068,3.69e-10,52;UBERON:0006241,3.69e-10,52;UBERON:0007135,3.69e-10,52;UBERON:0002780,4.80e-09,39;UBERON:0001890,4.80e-09,39;UBERON:0006240,4.80e-09,39;UBERON:0000955,5.05e-09,47;UBERON:0006238,5.05e-09,47;UBERON:0003080,6.03e-09,40;UBERON:0002619,1.62e-08,17;UBERON:0002616,1.68e-08,46;UBERON:0002021,4.93e-08,10;UBERON:0000411,4.93e-08,10;UBERON:0001950,4.93e-08,10;UBERON:0004121,2.15e-07,95;UBERON:0000924,2.15e-07,95;UBERON:0006601,2.15e-07,95|phase1_expression=0.640595388419176,8.72438519098403,5.91499011206397,5.14189159221611,5.50985302940982,5.37213670118047,3.73780224952841,30.8604743025367,94.3284438416167,67.4105835807341,30.6480163123654,16.2735204350486,47.2514014610128,34.793320162761,1.33243904726265,1.41732687172878,0.699561878128147,7.41336088591859,7.40417941470989,7.63901373236454,4.16712121740242,2.28369187762036,1.30599894569468,1.27993938234725,1.37645568640302,5.7423196411502,2.58457197695445,4.09395342103189,0.760093677825496,1.51218077855958,2.43903561720835,0,0,0,3.75507105676657,1.49611180822643,3.67504841272264,0,0,1.0470474879476,0,0,0,1.25896817975577,1.52065396829272,1.65192076945513,0.782391344348039,0.872100625521786,0.878744730937887,2.72201858703997,1.39986421625363,0,21.643956181448,68.9094034910777,47.7253194782299,1.54355661621568,2.57880095944881,2.06268836910977,3.23706337375356,3.1739458756322,0.633831403506179,1.69422266034566,3.55717918444456,0.899899717281399,0.988866362566974,2.1314403448383,2.69640099466564,1.92109152660777,29.1367810586822,33.4814727062593,28.604194743788,7.9982275633065,6.40518768759679,11.3916443269907,8.53024692062304,7.35375029288017,5.50579404996943,4.72443150915195,5.22262213071228,2.37395317914349,3.20206752608434,2.6045668527838,3.62937898701795,3.93933827022176,5.04234217663473,6.77645746589436,8.39992916714707,5.21918448310842,3.55913108665965,3.09843396437821,21.4499721639242,3.44169550792555,4.75979933595425,0,3.89865850468601,1.79210754838934,1.96622188184453,0.681721290312231,1.03914401841148,0,1.69012103732017,0,0,0,2.16491041011214,1.52015919285059,0.505524445014783,2.05530983494308,12.1700805314171,1.48442139064825,1.38788261412909,0.913396434936424,0.230615497256059,1.65794904607885,0.705532242814229,1.38233250462643,1.97755974187499,3.7595832799177,1.76922110389975,6.30890714794896,4.19598885074748,4.363877278217,1.86391761218122,12.0040126774734,10.6817820474862,4.08731288333746,11.5022519525683,18.5969846607956,8.00542430560307,2.69623150928681,19.6725259212009,6.15706325353036,35.2863369990321,29.6629930503183,5.40248915854856,12.1680947300818,1.73126918545538,2.86136032403214,2.27450482590307,0.631325567659422,0.390361328888111,0.689706313300419,1.44049703844279,1.50704817835715,1.15662048557257,1.15302348256365,1.40552586839593,1.03481348295606,0,1.51284864134255,1.40760899331159,4.16471891612392,2.78047249225598,3.83077383174383,5.55611768301447,0.59710280045548,4.91549231119264,9.00717674901503,6.25159698670304,1.24275463521301,1.17263029990548,1.2604344302271,1.65721314909647,1.57411385397923,2.31400669331067,1.86027155800326,1.3413670069981,0.817357396570186,0.987359099480883,2.13417703302824,4.13450928683864,4.09359964790931,2.63460138349261,3.08674763148855,26.2862435705159,20.1693040263397,3.30418782983798,0.264450566663544,1.06644125267617,1.3934200311626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| ||
|EntrezGene=15273 | |||
|HGNC= | |||
|MCL_coexpression_id=2539 | |||
|UniProt=Q3UHF7 | |||
|association_with_transcript=-237bp_to_uc007elg.1_5end | |||
|description=CAGE_peak_2_at_Hivep2_5end | |||
|id=chr10:13685585..13685645,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.67e-07!9;CL:0000789!5.67e-07!9;CL:0002420!5.67e-07!9;CL:0002419!5.67e-07!9;CL:0000790!5.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.12e-07,9;CL:0000789,5.12e-07,9;CL:0002420,5.12e-07,9;CL:0002419,5.12e-07,9;CL:0000790,5.12e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.84e-13!34;UBERON:0000064!3.91e-12!99;UBERON:0002791!3.03e-11!29;UBERON:0003528!3.03e-11!29;UBERON:0001893!3.03e-11!29;UBERON:0000073!4.26e-11!75;UBERON:0001016!4.26e-11!75;UBERON:0001017!5.55e-11!73;UBERON:0005743!5.55e-11!73;UBERON:0000956!6.44e-11!21;UBERON:0001869!6.44e-11!21;UBERON:0000203!6.44e-11!21;UBERON:0001049!2.02e-10!52;UBERON:0005068!2.02e-10!52;UBERON:0006241!2.02e-10!52;UBERON:0007135!2.02e-10!52;UBERON:0000955!4.78e-10!50;UBERON:0006238!4.78e-10!50;UBERON:0002616!1.64e-09!49;UBERON:0002780!3.91e-09!39;UBERON:0001890!3.91e-09!39;UBERON:0006240!3.91e-09!39;UBERON:0007811!4.40e-09!86;UBERON:0003080!4.93e-09!40;UBERON:0000153!5.11e-09!94;UBERON:0002619!1.28e-08!17;UBERON:0002021!5.57e-08!10;UBERON:0000411!5.57e-08!10;UBERON:0001950!5.57e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.47e-13,34;UBERON:0003528,3.53e-11,29;UBERON:0002791,3.53e-11,29;UBERON:0001893,3.53e-11,29;UBERON:0000073,5.81e-11,54;UBERON:0001016,6.44e-11,75;UBERON:0000956,7.92e-11,21;UBERON:0001869,7.92e-11,21;UBERON:0000203,7.92e-11,21;UBERON:0001017,8.43e-11,73;UBERON:0001049,3.69e-10,52;UBERON:0005068,3.69e-10,52;UBERON:0006241,3.69e-10,52;UBERON:0007135,3.69e-10,52;UBERON:0002780,4.80e-09,39;UBERON:0001890,4.80e-09,39;UBERON:0006240,4.80e-09,39;UBERON:0000955,5.05e-09,47;UBERON:0006238,5.05e-09,47;UBERON:0003080,6.03e-09,40;UBERON:0002619,1.62e-08,17;UBERON:0002616,1.68e-08,46;UBERON:0002021,4.93e-08,10;UBERON:0000411,4.93e-08,10;UBERON:0001950,4.93e-08,10;UBERON:0004121,2.15e-07,95;UBERON:0000924,2.15e-07,95;UBERON:0006601,2.15e-07,95 | |||
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| |||
|short_description=p2@Hivep2 | |||
}} |
Revision as of 16:15, 12 September 2013
Short description: | p2@Hivep2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hivep2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2539 |
Association with transcript: | -237bp_to_uc007elg.1_5end |
EntrezGene: | Hivep2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.12e-07 | 9 |
alpha-beta T cell | 5.12e-07 | 9 |
immature T cell | 5.12e-07 | 9 |
mature T cell | 5.12e-07 | 9 |
immature alpha-beta T cell | 5.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gray matter | 5.47e-13 | 34 |
brain grey matter | 3.53e-11 | 29 |
regional part of telencephalon | 3.53e-11 | 29 |
telencephalon | 3.53e-11 | 29 |
regional part of nervous system | 5.81e-11 | 54 |
nervous system | 6.44e-11 | 75 |
cerebral cortex | 7.92e-11 | 21 |
cerebral hemisphere | 7.92e-11 | 21 |
pallium | 7.92e-11 | 21 |
central nervous system | 8.43e-11 | 73 |
neural tube | 3.69e-10 | 52 |
neural rod | 3.69e-10 | 52 |
future spinal cord | 3.69e-10 | 52 |
neural keel | 3.69e-10 | 52 |
regional part of forebrain | 4.80e-09 | 39 |
forebrain | 4.80e-09 | 39 |
future forebrain | 4.80e-09 | 39 |
brain | 5.05e-09 | 47 |
future brain | 5.05e-09 | 47 |
anterior neural tube | 6.03e-09 | 40 |
regional part of cerebral cortex | 1.62e-08 | 17 |
regional part of brain | 1.68e-08 | 46 |
occipital lobe | 4.93e-08 | 10 |
visual cortex | 4.93e-08 | 10 |
neocortex | 4.93e-08 | 10 |
ectoderm-derived structure | 2.15e-07 | 95 |
ectoderm | 2.15e-07 | 95 |
presumptive ectoderm | 2.15e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.