FFCP PHASE1:Hg19::chr2:220299547..220299572,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10290|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16901|TSSclassifier=S|UniProt=Q15772|association_with_transcript=0bp_to_ENST00000312358_5end|coexpression_cluster_id=C72|description=CAGE_peak_3_at_SPEG_5end|id=chr2:220299547..220299572,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;2.28e-13;4!UBERON:0007284;2.28e-13;4!UBERON:0006603;2.59e-08;65!UBERON:0004874;3.36e-07;1!UBERON:0004140;3.67e-07;1!UBERON:0010226;4.51e-07;1!UBERON:0010227;5.52e-07;1!UBERON:0000358;6.56e-07;1!UBERON:0006298;8.49e-07;1|ontology_enrichment_disease=DOID:114!5.32e-07!2|ontology_enrichment_disease_v019=DOID:114;1.15e-12;2!DOID:178;4.25e-07;1!DOID:326;4.25e-07;1!DOID:3978;4.25e-07;1!DOID:3394;4.25e-07;1!DOID:5844;4.25e-07;1!DOID:1287;9.67e-07;4|ontology_enrichment_disease_v019_2=DOID:114,1.18e-12,2;DOID:178,4.25e-07,1;DOID:326,4.25e-07,1;DOID:3978,4.25e-07,1;DOID:3394,4.25e-07,1;DOID:5844,4.25e-07,1;DOID:1287,9.81e-07,4|ontology_enrichment_uberon=UBERON:0007023!2.12e-39!115;UBERON:0003978!1.92e-09!3;UBERON:0009751!1.92e-09!3;UBERON:0000946!1.92e-09!3;UBERON:0002523!1.92e-09!3;UBERON:0005983!1.92e-09!3;UBERON:0002165!1.92e-09!3;UBERON:0002062!1.92e-09!3;UBERON:0007280!1.92e-09!3;UBERON:0004151!1.97e-09!3;UBERON:0003103!1.26e-08!69;UBERON:0001630!3.77e-07!2;UBERON:0005090!3.77e-07!2;UBERON:0007100!4.11e-07!27;UBERON:0000341!4.75e-07!2;UBERON:0002081!8.60e-07!2;UBERON:0002133!8.84e-07!2;UBERON:0003127!9.89e-07!2|ontology_enrichment_uberon_v019=UBERON:0003978;1.21e-17;3!UBERON:0000946;1.21e-17;3!UBERON:0004151;1.36e-17;3!UBERON:0007100;4.65e-17;25!UBERON:0005090;5.72e-13;2!UBERON:0001630;5.72e-13;2!UBERON:0000341;9.38e-13;2!UBERON:0002081;3.13e-12;2!UBERON:0002133;3.13e-12;2!UBERON:0003127;5.34e-12;2!UBERON:0001829;8.81e-12;2!UBERON:0001723;6.55e-09;3!UBERON:0001033;6.55e-09;3!UBERON:0000948;8.68e-09;22!UBERON:0007023;2.11e-07;114!UBERON:0001389;2.43e-07;1!UBERON:0000026;2.43e-07;1!UBERON:0008784;2.43e-07;1!UBERON:0006058;2.43e-07;1!UBERON:0003663;2.43e-07;1!UBERON:0004256;2.43e-07;1!UBERON:0004708;2.43e-07;1!UBERON:0002101;2.43e-07;1!UBERON:0004709;2.43e-07;1!UBERON:0002529;2.43e-07;1!UBERON:0010538;2.43e-07;1!UBERON:0003661;2.43e-07;1!UBERON:0010890;2.43e-07;1!UBERON:0002471;2.43e-07;1!UBERON:0001383;2.43e-07;1!UBERON:0010758;2.43e-07;1!UBERON:0010707;2.43e-07;1!UBERON:0000978;2.43e-07;1!UBERON:0002103;2.43e-07;1!UBERON:0001665;2.43e-07;1!UBERON:0003823;2.43e-07;1!UBERON:0000154;2.43e-07;1!UBERON:0010709;2.43e-07;1!UBERON:0002426;2.66e-07;1!UBERON:0003831;2.66e-07;1!UBERON:0003898;2.66e-07;1!UBERON:0004830;2.66e-07;1!UBERON:0003830;2.66e-07;1!UBERON:0005175;2.66e-07;1!UBERON:0001774;2.66e-07;1!UBERON:0001103;2.66e-07;1!UBERON:0000989;3.36e-07;1!UBERON:0008811;3.36e-07;1!UBERON:0002146;4.01e-07;1!UBERON:0005623;4.01e-07;1!UBERON:0002084;4.51e-07;1!UBERON:0002082;4.51e-07;1!UBERON:0002079;5.52e-07;1!UBERON:0002135;5.52e-07;1!UBERON:0007029;6.02e-07;1!UBERON:0002134;6.56e-07;1!UBERON:0005208;6.56e-07;1!UBERON:0004145;6.56e-07;1!UBERON:0005946;6.56e-07;1!UBERON:0005965;6.56e-07;1!UBERON:0002078;6.56e-07;1!UBERON:0002372;7.36e-07;1!UBERON:0001301;7.36e-07;1!UBERON:0001961;7.36e-07;1!UBERON:0001744;7.36e-07;1!UBERON:0001042;7.36e-07;1!UBERON:0001735;7.36e-07;1!UBERON:0001736;8.49e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.57e-23,114;UBERON:0003978,1.29e-17,3;UBERON:0009751,1.29e-17,3;UBERON:0000946,1.29e-17,3;UBERON:0002523,1.29e-17,3;UBERON:0005983,1.29e-17,3;UBERON:0002165,1.29e-17,3;UBERON:0002062,1.29e-17,3;UBERON:0007280,1.29e-17,3;UBERON:0004151,1.36e-17,3;UBERON:0007100,1.13e-15,27;UBERON:0003103,1.66e-13,68;UBERON:0005090,5.89e-13,2;UBERON:0001630,5.89e-13,2;UBERON:0000341,9.39e-13,2;UBERON:0002081,3.13e-12,2;UBERON:0010227,3.13e-12,2;UBERON:0002133,3.31e-12,2;UBERON:0003127,4.15e-12,2;UBERON:0001829,1.07e-11,2;UBERON:0001723,6.42e-09,3;UBERON:0001033,6.42e-09,3;UBERON:0010056,6.42e-09,3;UBERON:0000948,5.32e-08,24;UBERON:0005498,5.32e-08,24;UBERON:0004140,5.32e-08,24;UBERON:0009881,5.32e-08,24;UBERON:0004141,5.32e-08,24;UBERON:0003084,5.32e-08,24;UBERON:0007005,5.32e-08,24;UBERON:0004139,5.32e-08,24;UBERON:0004291,5.32e-08,24;UBERON:0004797,7.93e-08,7;UBERON:0005418,2.50e-07,1;UBERON:0001389,2.50e-07,1;UBERON:0000026,2.50e-07,1;UBERON:0008784,2.50e-07,1;UBERON:0006058,2.50e-07,1;UBERON:0003663,2.50e-07,1;UBERON:0004256,2.50e-07,1;UBERON:0004708,2.50e-07,1;UBERON:0002101,2.50e-07,1;UBERON:0004709,2.50e-07,1;UBERON:0002529,2.50e-07,1;UBERON:0010538,2.50e-07,1;UBERON:0003661,2.50e-07,1;UBERON:0010890,2.50e-07,1;UBERON:0002471,2.50e-07,1;UBERON:0001383,2.50e-07,1;UBERON:0004357,2.50e-07,1;UBERON:0004347,2.50e-07,1;UBERON:0005420,2.50e-07,1;UBERON:0005732,2.50e-07,1;UBERON:0010758,2.50e-07,1;UBERON:0010707,2.50e-07,1;UBERON:0000978,2.50e-07,1;UBERON:0002103,2.50e-07,1;UBERON:0001665,2.50e-07,1;UBERON:0003823,2.50e-07,1;UBERON:0000154,2.50e-07,1;UB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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |||
|TSSclassifier=S | |||
|UniProt=Q15772 | |||
|association_with_transcript=0bp_to_ENST00000312358_5end | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_3_at_SPEG_5end | |||
|id=chr2:220299547..220299572,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.28e-13;4!UBERON:0007284;2.28e-13;4!UBERON:0006603;2.59e-08;65!UBERON:0004874;3.36e-07;1!UBERON:0004140;3.67e-07;1!UBERON:0010226;4.51e-07;1!UBERON:0010227;5.52e-07;1!UBERON:0000358;6.56e-07;1!UBERON:0006298;8.49e-07;1 | |||
|ontology_enrichment_disease=DOID:114!5.32e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.15e-12;2!DOID:178;4.25e-07;1!DOID:326;4.25e-07;1!DOID:3978;4.25e-07;1!DOID:3394;4.25e-07;1!DOID:5844;4.25e-07;1!DOID:1287;9.67e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.18e-12,2;DOID:178,4.25e-07,1;DOID:326,4.25e-07,1;DOID:3978,4.25e-07,1;DOID:3394,4.25e-07,1;DOID:5844,4.25e-07,1;DOID:1287,9.81e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-39!115;UBERON:0003978!1.92e-09!3;UBERON:0009751!1.92e-09!3;UBERON:0000946!1.92e-09!3;UBERON:0002523!1.92e-09!3;UBERON:0005983!1.92e-09!3;UBERON:0002165!1.92e-09!3;UBERON:0002062!1.92e-09!3;UBERON:0007280!1.92e-09!3;UBERON:0004151!1.97e-09!3;UBERON:0003103!1.26e-08!69;UBERON:0001630!3.77e-07!2;UBERON:0005090!3.77e-07!2;UBERON:0007100!4.11e-07!27;UBERON:0000341!4.75e-07!2;UBERON:0002081!8.60e-07!2;UBERON:0002133!8.84e-07!2;UBERON:0003127!9.89e-07!2 | |||
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|short_description=p3@SPEG | |||
}} |
Revision as of 17:00, 12 September 2013
Short description: | p3@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SPEG_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000312358_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | Q15772 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.18e-12 | 2 |
vascular disease | 4.25e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.