FFCP PHASE1:Mm9::chr11:103274142..103274154,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:103274142..103274154,+|id=chr11:103274142..103274154,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000945,1.73e-09,1;CL:0000236,1.73e-09,1;CL:0000826,1.73e-09,1;CL:0000213,3.04e-09,1;CL:0002078,3.04e-09,1;CL:0000115,3.04e-09,1;CL:0002262,3.04e-09,1;CL:1000398,3.04e-09,1;CL:0000355,1.25e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.36e-24,3;DOID:4045,1.36e-24,3;DOID:0050686,1.20e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.04e-09,1;UBERON:0001281,3.04e-09,1;UBERON:0000353,3.04e-09,1;UBERON:0003497,3.04e-09,1;UBERON:0003909,3.04e-09,1;UBERON:0003928,3.04e-09,1;UBERON:0003835,3.04e-09,1;UBERON:0003513,3.04e-09,1;UBERON:0001280,3.04e-09,1;UBERON:0004647,3.04e-09,1;UBERON:0002294,3.04e-09,1;UBERON:0001173,3.04e-09,1;UBERON:0004912,3.04e-09,1;UBERON:0005171,3.04e-09,1;UBERON:0001134,1.25e-08,9;UBERON:0002036,1.25e-08,9;UBERON:0002385,1.25e-08,9;UBERON:0000486,1.25e-08,9;UBERON:0007503,1.25e-08,9;UBERON:0001015,1.25e-08,9;UBERON:0002329,1.25e-08,9;UBERON:0003082,1.25e-08,9;UBERON:0003059,1.25e-08,9;UBERON:0007282,1.25e-08,9;UBERON:0004290,1.25e-08,9;UBERON:0009618,1.25e-08,9;UBERON:0000383,8.07e-08,10;UBERON:0007524,3.71e-07,11;UBERON:0003077,3.71e-07,11;UBERON:0007285,3.71e-07,11|phase1_expression=0,0.348975407639361,0.454999239389536,0,1.00179145989269,0.33575854382378,0,0.516493293766305,0.140788722151667,0,0,0,0.513602189793617,0.0874204024189974,0,0.202475267389826,0,0.315462165358238,0.548457734422955,0.42438965179803,0.0850432901510698,0,0,0,0.22940928106717,1.14846392823004,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,6.69650609179052,3.906676722619,1.0470474879476,15.2940186888064,4.09827290975067,6.311634589405,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,4.36234775750115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:103274142..103274154,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:103274142..103274154,+ | |||
|id=chr11:103274142..103274154,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.73e-09,1;CL:0000236,1.73e-09,1;CL:0000826,1.73e-09,1;CL:0000213,3.04e-09,1;CL:0002078,3.04e-09,1;CL:0000115,3.04e-09,1;CL:0002262,3.04e-09,1;CL:1000398,3.04e-09,1;CL:0000355,1.25e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.36e-24,3;DOID:4045,1.36e-24,3;DOID:0050686,1.20e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.04e-09,1;UBERON:0001281,3.04e-09,1;UBERON:0000353,3.04e-09,1;UBERON:0003497,3.04e-09,1;UBERON:0003909,3.04e-09,1;UBERON:0003928,3.04e-09,1;UBERON:0003835,3.04e-09,1;UBERON:0003513,3.04e-09,1;UBERON:0001280,3.04e-09,1;UBERON:0004647,3.04e-09,1;UBERON:0002294,3.04e-09,1;UBERON:0001173,3.04e-09,1;UBERON:0004912,3.04e-09,1;UBERON:0005171,3.04e-09,1;UBERON:0001134,1.25e-08,9;UBERON:0002036,1.25e-08,9;UBERON:0002385,1.25e-08,9;UBERON:0000486,1.25e-08,9;UBERON:0007503,1.25e-08,9;UBERON:0001015,1.25e-08,9;UBERON:0002329,1.25e-08,9;UBERON:0003082,1.25e-08,9;UBERON:0003059,1.25e-08,9;UBERON:0007282,1.25e-08,9;UBERON:0004290,1.25e-08,9;UBERON:0009618,1.25e-08,9;UBERON:0000383,8.07e-08,10;UBERON:0007524,3.71e-07,11;UBERON:0003077,3.71e-07,11;UBERON:0007285,3.71e-07,11 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,1.00179145989269,0.33575854382378,0,0.516493293766305,0.140788722151667,0,0,0,0.513602189793617,0.0874204024189974,0,0.202475267389826,0,0.315462165358238,0.548457734422955,0.42438965179803,0.0850432901510698,0,0,0,0.22940928106717,1.14846392823004,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,6.69650609179052,3.906676722619,1.0470474879476,15.2940186888064,4.09827290975067,6.311634589405,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,4.36234775750115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:103274142..103274154,+ | |||
}} |
Revision as of 18:25, 12 September 2013
Short description: | p@chr11:103274142..103274154, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:103274142..103274154, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.73e-09 | 1 |
B cell | 1.73e-09 | 1 |
pro-B cell | 1.73e-09 | 1 |
lining cell | 3.04e-09 | 1 |
meso-epithelial cell | 3.04e-09 | 1 |
endothelial cell | 3.04e-09 | 1 |
endothelial cell of sinusoid | 3.04e-09 | 1 |
endothelial cell of hepatic sinusoid | 3.04e-09 | 1 |
multi-potent skeletal muscle stem cell | 1.25e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.04e-09 | 1 |
hepatic sinusoid | 3.04e-09 | 1 |
parenchyma | 3.04e-09 | 1 |
abdomen blood vessel | 3.04e-09 | 1 |
sinusoid | 3.04e-09 | 1 |
digestive system duct | 3.04e-09 | 1 |
abdominal segment blood vessel | 3.04e-09 | 1 |
trunk blood vessel | 3.04e-09 | 1 |
liver parenchyma | 3.04e-09 | 1 |
liver lobule | 3.04e-09 | 1 |
biliary system | 3.04e-09 | 1 |
biliary tree | 3.04e-09 | 1 |
biliary bud | 3.04e-09 | 1 |
hepatic duct | 3.04e-09 | 1 |
skeletal muscle tissue | 1.25e-08 | 9 |
striated muscle tissue | 1.25e-08 | 9 |
muscle tissue | 1.25e-08 | 9 |
multilaminar epithelium | 1.25e-08 | 9 |
epithelial vesicle | 1.25e-08 | 9 |
musculature | 1.25e-08 | 9 |
somite | 1.25e-08 | 9 |
myotome | 1.25e-08 | 9 |
presomitic mesoderm | 1.25e-08 | 9 |
presumptive segmental plate | 1.25e-08 | 9 |
dermomyotome | 1.25e-08 | 9 |
trunk paraxial mesoderm | 1.25e-08 | 9 |
musculature of body | 8.07e-08 | 10 |
dense mesenchyme tissue | 3.71e-07 | 11 |
paraxial mesoderm | 3.71e-07 | 11 |
presumptive paraxial mesoderm | 3.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.36e-24 | 3 |
muscle cancer | 1.36e-24 | 3 |
organ system cancer | 1.20e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.