FFCP PHASE1:Mm9::chr11:118151481..118151489,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72344|HGNC=|UniProt=B0QZF8|association_with_transcript=4bp_to_ENSMUST00000144153_5end|description=CAGE_peak_3_at_Usp36_5end|id=chr11:118151481..118151489,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000624,8.60e-22,8;CL:0002031,1.57e-21,25;CL:0000838,2.24e-20,12;CL:0000791,2.22e-19,9;CL:0000789,2.22e-19,9;CL:0002420,2.22e-19,9;CL:0002419,2.22e-19,9;CL:0000790,2.22e-19,9;CL:0000893,4.63e-19,6;CL:0002489,4.63e-19,6;CL:0000898,4.63e-19,6;CL:0000809,4.63e-19,6;CL:0000810,4.63e-19,6;CL:0000895,4.63e-19,6;CL:0000808,4.63e-19,6;CL:0000894,4.63e-19,6;CL:0000806,4.63e-19,6;CL:0000807,4.63e-19,6;CL:0000805,4.63e-19,6;CL:0002425,4.63e-19,6;CL:0002436,4.63e-19,6;CL:0002427,4.63e-19,6;CL:0002428,4.63e-19,6;CL:0002429,4.63e-19,6;CL:0002433,4.63e-19,6;CL:0002431,4.63e-19,6;CL:0002432,4.63e-19,6;CL:0000542,8.53e-19,13;CL:0000051,8.53e-19,13;CL:0000988,1.19e-16,32;CL:0002032,1.19e-16,32;CL:0000037,1.19e-16,32;CL:0000837,1.19e-16,32;CL:0000084,7.25e-16,11;CL:0000827,7.25e-16,11;CL:0000738,2.52e-14,17;CL:0002087,2.52e-14,17;CL:0002320,2.50e-11,46;CL:0000134,2.50e-11,46;CL:0000764,2.41e-10,3;CL:0000765,2.41e-10,3;CL:0000038,2.41e-10,3;CL:0000547,2.41e-10,3;CL:0000219,1.62e-09,54;CL:0000945,1.05e-07,1;CL:0000236,1.05e-07,1;CL:0000826,1.05e-07,1;CL:0000050,1.53e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,2.41e-10,3;DOID:0060083,2.41e-10,3;DOID:1240,2.41e-10,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.50e-11,46;UBERON:0002370,1.60e-07,23;UBERON:0000974,1.60e-07,23;UBERON:0004807,1.60e-07,23;UBERON:0005058,1.60e-07,23;UBERON:0003351,1.60e-07,23;UBERON:0009113,1.60e-07,23;UBERON:0003295,1.60e-07,23;UBERON:0009722,1.60e-07,23;UBERON:0005562,1.60e-07,23;UBERON:0007690,1.60e-07,23;UBERON:0006562,3.31e-07,24;UBERON:0003408,3.31e-07,24;UBERON:0001557,3.31e-07,24;UBERON:0001042,3.31e-07,24;UBERON:0008814,3.31e-07,24;UBERON:0009145,3.31e-07,24|phase1_expression=0,0,0,0,0.500895729946347,0,0.467225281191051,0.387369970324729,1.97104211012333,3.04283884218592,3.08192342805909,3.03134204182278,0.342401459862411,0.524522414513984,0,0.202475267389826,0,0.315462165358238,0.274228867211478,1.69755860719212,0.17008658030214,0.0992909512008853,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0.221730510655305,1.90509202037889,3.69038872550742,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0,0,0.139986421625363,0,1.00669563634642,1.45072428402269,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0,0,0.837548997004143,0,0.30559649555362,0,0,0,0.530083353332288,0.0755715601067855,0.289864488701678,0,0.679971333707751,0,0,0.896053774194671,0,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.17112318804619,0.41889341362691,0.255457055208591,0.599075622529601,0.599902730993408,0.381210681219194,0.299581278809645,0.457500602818626,0,0.173824320192276,0,0.62336413367868,0,0,0,0.252722758433675,0,0.520481771850815,0.229902104433473,0.180062129805349,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0.351902248327898,0,0.556094498451196,0.348252166522167,0,0.199034266818493,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.617068451549513,0,0,0,0.493679549740441,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,0,0.411618449517138,0,0.793351699990633,0,0.696710015581316,0.644337306610467,0.403367049246685,0.889512175379481,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.280543279561274,0.0632365371242573,0.295220295959204,0,0.123397163921801,0.296452627087149,0.500535317148282,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.505157755894224,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.509235257325564,0.938760993154008,0.167506257441816,0,0.585400943573396,0,0.221464689648775,0.637819074629948,0.163863314715738,0.345369963731791,0,0,0,0,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0,0,0.716906393857656,0.445597348164788,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.18006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| ||
|EntrezGene=72344 | |||
|HGNC= | |||
|UniProt=B0QZF8 | |||
|association_with_transcript=4bp_to_ENSMUST00000144153_5end | |||
|description=CAGE_peak_3_at_Usp36_5end | |||
|id=chr11:118151481..118151489,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,8.60e-22,8;CL:0002031,1.57e-21,25;CL:0000838,2.24e-20,12;CL:0000791,2.22e-19,9;CL:0000789,2.22e-19,9;CL:0002420,2.22e-19,9;CL:0002419,2.22e-19,9;CL:0000790,2.22e-19,9;CL:0000893,4.63e-19,6;CL:0002489,4.63e-19,6;CL:0000898,4.63e-19,6;CL:0000809,4.63e-19,6;CL:0000810,4.63e-19,6;CL:0000895,4.63e-19,6;CL:0000808,4.63e-19,6;CL:0000894,4.63e-19,6;CL:0000806,4.63e-19,6;CL:0000807,4.63e-19,6;CL:0000805,4.63e-19,6;CL:0002425,4.63e-19,6;CL:0002436,4.63e-19,6;CL:0002427,4.63e-19,6;CL:0002428,4.63e-19,6;CL:0002429,4.63e-19,6;CL:0002433,4.63e-19,6;CL:0002431,4.63e-19,6;CL:0002432,4.63e-19,6;CL:0000542,8.53e-19,13;CL:0000051,8.53e-19,13;CL:0000988,1.19e-16,32;CL:0002032,1.19e-16,32;CL:0000037,1.19e-16,32;CL:0000837,1.19e-16,32;CL:0000084,7.25e-16,11;CL:0000827,7.25e-16,11;CL:0000738,2.52e-14,17;CL:0002087,2.52e-14,17;CL:0002320,2.50e-11,46;CL:0000134,2.50e-11,46;CL:0000764,2.41e-10,3;CL:0000765,2.41e-10,3;CL:0000038,2.41e-10,3;CL:0000547,2.41e-10,3;CL:0000219,1.62e-09,54;CL:0000945,1.05e-07,1;CL:0000236,1.05e-07,1;CL:0000826,1.05e-07,1;CL:0000050,1.53e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.41e-10,3;DOID:0060083,2.41e-10,3;DOID:1240,2.41e-10,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.50e-11,46;UBERON:0002370,1.60e-07,23;UBERON:0000974,1.60e-07,23;UBERON:0004807,1.60e-07,23;UBERON:0005058,1.60e-07,23;UBERON:0003351,1.60e-07,23;UBERON:0009113,1.60e-07,23;UBERON:0003295,1.60e-07,23;UBERON:0009722,1.60e-07,23;UBERON:0005562,1.60e-07,23;UBERON:0007690,1.60e-07,23;UBERON:0006562,3.31e-07,24;UBERON:0003408,3.31e-07,24;UBERON:0001557,3.31e-07,24;UBERON:0001042,3.31e-07,24;UBERON:0008814,3.31e-07,24;UBERON:0009145,3.31e-07,24 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0.467225281191051,0.387369970324729,1.97104211012333,3.04283884218592,3.08192342805909,3.03134204182278,0.342401459862411,0.524522414513984,0,0.202475267389826,0,0.315462165358238,0.274228867211478,1.69755860719212,0.17008658030214,0.0992909512008853,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0.221730510655305,1.90509202037889,3.69038872550742,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0,0,0.139986421625363,0,1.00669563634642,1.45072428402269,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0,0,0.837548997004143,0,0.30559649555362,0,0,0,0.530083353332288,0.0755715601067855,0.289864488701678,0,0.679971333707751,0,0,0.896053774194671,0,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.17112318804619,0.41889341362691,0.255457055208591,0.599075622529601,0.599902730993408,0.381210681219194,0.299581278809645,0.457500602818626,0,0.173824320192276,0,0.62336413367868,0,0,0,0.252722758433675,0,0.520481771850815,0.229902104433473,0.180062129805349,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0.351902248327898,0,0.556094498451196,0.348252166522167,0,0.199034266818493,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.617068451549513,0,0,0,0.493679549740441,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,0,0.411618449517138,0,0.793351699990633,0,0.696710015581316,0.644337306610467,0.403367049246685,0.889512175379481,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.280543279561274,0.0632365371242573,0.295220295959204,0,0.123397163921801,0.296452627087149,0.500535317148282,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.505157755894224,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.509235257325564,0.938760993154008,0.167506257441816,0,0.585400943573396,0,0.221464689648775,0.637819074629948,0.163863314715738,0.345369963731791,0,0,0,0,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0,0,0.716906393857656,0.445597348164788,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0.23467170806371,0.42366414172764,0.220528398054962,0.49465875882444,0.484393280087717,0.482503399425247,0.358117032009409,0.492422699235184,0,0,0.512612642393558,0.206386867963223,0.555583582109135,0,0.27338845544205,0.686334519619568,0.509935289981566,1.11961161858926,0.552799895217695,0,0.316335993581135,0.406638934253697,0.324016022465404,0,0,0.269728692769641,0,0,0.388844919875379,0,0,0.598066184175915,0,0.194451188344048,0.387479470433193,0,0.469428954583016,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,0.51968329191118,1.07416017400489,0,0.480781798079875,0.443068581523732,0.100966449948148,0.457240839929999,0.100826185136841,0.292373642219257,0.384847366561318,0.350630706544707,0.680191150845634,0.887943813496259,0.358855426437903,0,0,0.375364950902364,0.915758121336325,0,0,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.628839487883947,0,0.666740183404846,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0.952587382566147,0.347652977834566,0,0.412085900803307,0.883193520806384,0.342869252385415,0,0,0.436039249896986,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p3@Usp36 | |||
}} |
Revision as of 18:58, 12 September 2013
Short description: | p3@Usp36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Usp36_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENSMUST00000144153_5end |
EntrezGene: | Usp36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.50e-11 | 46 |
thymus | 1.60e-07 | 23 |
neck | 1.60e-07 | 23 |
respiratory system epithelium | 1.60e-07 | 23 |
hemolymphoid system gland | 1.60e-07 | 23 |
pharyngeal epithelium | 1.60e-07 | 23 |
thymic region | 1.60e-07 | 23 |
pharyngeal gland | 1.60e-07 | 23 |
entire pharyngeal arch endoderm | 1.60e-07 | 23 |
thymus primordium | 1.60e-07 | 23 |
early pharyngeal endoderm | 1.60e-07 | 23 |
pharynx | 3.31e-07 | 24 |
gland of gut | 3.31e-07 | 24 |
upper respiratory tract | 3.31e-07 | 24 |
chordate pharynx | 3.31e-07 | 24 |
pharyngeal arch system | 3.31e-07 | 24 |
pharyngeal region of foregut | 3.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.41e-10 | 3 |
immune system cancer | 2.41e-10 | 3 |
leukemia | 2.41e-10 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.