FFCP PHASE1:Hg19::chr3:119813302..119813318,-: Difference between revisions
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{{FFCP | 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73498977531838,6.30924491143255,4.43025609936798,3.21662387062389,4.69789725537381,7.70800146741726,4.16740453782901,4.64999738562288,5.55175407352611,9.26404341482917,8.99064603272699,4.94729608648467,5.78742114812744,5.5751005415514,4.09986429740715,4.83602478423678,6.98877899207979,11.6137086367454,6.8201108093786,5.58032329316125,4.74339643341948,1.63804924423206,2.70350199629091,4.6488667138898,4.19973531295353,2.98736843143594,5.68309432880692,1.13503190713367,5.15496660705154,6.15469833965556,6.22077260032973,5.49945796605702,4.95994132424736,2.04445724412665,5.13285299502465,4.24331324885063,4.46407332213534,2.47871528518004,5.58644917973244,5.0880696104547,3.31219329005264,0.80057074828547,5.29013915536026,5.5124185923576,8.99209151350433,5.6678630530234,8.30096067097186,5.9483745629819,8.3183659753167,16.1136398241628,13.0795272961799,2.85538840518309,3.53331786603692,4.01097059382317,6.9702867438238,3.46576998451015,9.15317029121201,0.690359926060101,3.58049199809294,7.89708447667201,2.82387096184928,6.25211208986474,4.7143205006656,5.89578903036348,6.2099556211159,11.6164645543639,8.59185908475232,9.92096623205684,13.0636568999448,11.4864709893826,6.57909320228619,4.46590060550365,2.46219742103469,4.72720982266503,12.8568440610789,13.451348888753,10.3184152720227,9.7894742281058,8.24932042512541,3.3417856391176,9.77481653793285,8.97200475294179,12.1679631091271,2.00929529502746,4.6717188794669,8.55574712070603,10.0553977546241,2.24217730651031,2.73947616152849,1.51149313853035,4.7775168788705,8.50570875702211,3.00225862292181,3.95220846251626,4.17259853526191,4.81026818838152,4.97318793991288,8.36520537760355,7.60385627995501,6.02318302348389,4.85161202995318,6.81707238073262,2.11693525095465,4.35303050233695,4.34288939930048,2.8666168169323,3.35566295393377,1.86485443868962,4.87671699929078,2.58971534875158,5.54379157023734,3.4794432940146,5.34282092365053,2.80727356154527,5.57062170451831,6.4216849019887,3.61427462524672,4.28768015307174,8.45391923973372,6.71415175539119,5.02686989159102,1.88126918544609,4.6578181133242,4.00650130072764,5.69294554633341,8.02025280883132,6.7624916413344,5.26774055532232,13.0637645991996,7.41265711696138,3.19811698959773,3.57107877211315,0.352894871715692,6.41930933513346,2.19100916473955,5.96348068425903,6.45028124181531,3.47097436825006,13.530306547992,18.3267289942959,14.2837246939158,6.69591032700152,6.47045880083986,6.48939843185684,3.02799419604189,2.84090487105608,2.78736702225161,2.95767606251747,4.00826107898341,1.19463369395298,1.25353769646188,8.41143550222457,7.77095977452918,4.97501663675268,6.20597975171371,5.75731751132648,6.42773964952099,15.9534607294935,9.74573014444969,3.47608773999902,6.81024593576364,3.84022659020617,3.9189014621453,2.05339980651169,3.56965880977314,6.52672069073355,7.31852784401229,4.72138957943652,4.05563914335319,1.9307228228694,2.96423166951737,7.03922827210363,8.31241820443492,6.91723503136755,5.99181096766961,8.4534993308231,5.77023286145819|short_description=p2@GSK3B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4617 | |||
|TSSclassifier=S | |||
|UniProt=P49841,Q6FI27 | |||
|association_with_transcript=-38bp_to_ENST00000264235,NM_001146156,NM_002093,uc003edn.2,uc003edo.2_5end | |||
|description=CAGE_peak_2_at_GSK3B_5end | |||
|id=chr3:119813302..119813318,- | |||
|ontology_enrichment_celltype=CL:0000738!1.49e-08!140;CL:0000766!1.34e-07!76 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.33e-09,136;CL:0000766,5.15e-09,72;CL:0000557,2.06e-07,67;CL:0002031,4.82e-07,120;CL:0002087,7.92e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;4.90e-11;22!UBERON:0001950;3.97e-10;20!UBERON:0000956;1.93e-09;25!UBERON:0000203;1.93e-09;25!UBERON:0001893;2.74e-09;34!UBERON:0001869;4.32e-09;32!UBERON:0003528;4.44e-09;34!UBERON:0002020;4.44e-09;34!UBERON:0002780;5.57e-09;41!UBERON:0001890;5.57e-09;41!UBERON:0002791;9.10e-09;32!UBERON:0000073;2.17e-08;53!UBERON:0002616;2.17e-08;53 | |||
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| |||
|short_description=p2@GSK3B | |||
}} |
Revision as of 21:04, 12 September 2013
Short description: | p2@GSK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GSK3B_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000264235, NM_001146156, NM_002093, uc003edn.2, uc003edo.2_5end |
EntrezGene: | GSK3B |
HGNC: | 4617 |
UniProt: | P49841Q6FI27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.33e-09 | 136 |
myeloid leukocyte | 5.15e-09 | 72 |
granulocyte monocyte progenitor cell | 2.06e-07 | 67 |
hematopoietic lineage restricted progenitor cell | 4.82e-07 | 120 |
nongranular leukocyte | 7.92e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.79e-17 | 114 |
neural tube | 9.64e-14 | 56 |
neural rod | 9.64e-14 | 56 |
future spinal cord | 9.64e-14 | 56 |
neural keel | 9.64e-14 | 56 |
regional part of nervous system | 1.90e-13 | 53 |
regional part of brain | 1.90e-13 | 53 |
regional part of forebrain | 1.31e-12 | 41 |
forebrain | 1.31e-12 | 41 |
anterior neural tube | 1.31e-12 | 41 |
future forebrain | 1.31e-12 | 41 |
central nervous system | 8.74e-12 | 81 |
brain | 1.85e-11 | 68 |
future brain | 1.85e-11 | 68 |
regional part of cerebral cortex | 4.65e-11 | 22 |
telencephalon | 1.25e-10 | 34 |
cerebral hemisphere | 2.33e-10 | 32 |
nervous system | 2.44e-10 | 89 |
brain grey matter | 2.63e-10 | 34 |
gray matter | 2.63e-10 | 34 |
neocortex | 3.67e-10 | 20 |
regional part of telencephalon | 6.69e-10 | 32 |
hematopoietic system | 9.28e-10 | 98 |
blood island | 9.28e-10 | 98 |
cerebral cortex | 2.03e-09 | 25 |
pallium | 2.03e-09 | 25 |
neural plate | 1.28e-08 | 82 |
presumptive neural plate | 1.28e-08 | 82 |
pre-chordal neural plate | 6.04e-08 | 61 |
neurectoderm | 2.13e-07 | 86 |
ecto-epithelium | 2.37e-07 | 104 |
hemolymphoid system | 2.65e-07 | 108 |
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