FFCP PHASE1:Hg19::chr3:171177960..171177963,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23043|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30765|TSSclassifier=S|UniProt=|association_with_transcript=-108bp_to_ENST00000284483,ENST00000357327,ENST00000460047,ENST00000470834,ENST00000475336,ENST00000488470_5end|description=CAGE_peak_9_at_TNIK_5end|id=chr3:171177960..171177963,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;1.03e-18;5!CL:0000163;1.17e-10;9|ontology_enrichment_celltype_v019_2=CL:0000097,7.16e-19,5;CL:0002028,7.16e-19,5;CL:0000163,9.64e-11,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.62e-22!57;UBERON:0005068!1.62e-22!57;UBERON:0006241!1.62e-22!57;UBERON:0007135!1.62e-22!57;UBERON:0001893!3.26e-20!34;UBERON:0002020!3.95e-20!34;UBERON:0003528!3.95e-20!34;UBERON:0002780!7.76e-20!41;UBERON:0001890!7.76e-20!41;UBERON:0006240!7.76e-20!41;UBERON:0002616!9.13e-20!59;UBERON:0002791!1.53e-19!33;UBERON:0001869!2.22e-19!32;UBERON:0003080!4.46e-19!42;UBERON:0005743!8.06e-19!86;UBERON:0001017!1.04e-18!82;UBERON:0003075!5.38e-17!86;UBERON:0007284!5.38e-17!86;UBERON:0000073!8.80e-17!94;UBERON:0001016!8.80e-17!94;UBERON:0007023!1.88e-16!115;UBERON:0000955!2.51e-16!69;UBERON:0006238!2.51e-16!69;UBERON:0001950!1.20e-15!20;UBERON:0002619!1.67e-15!22;UBERON:0002346!1.78e-15!90;UBERON:0000956!3.58e-15!25;UBERON:0000203!3.58e-15!25;UBERON:0003056!5.29e-13!61;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0000025!1.02e-08!194;UBERON:0000033!2.38e-08!123;UBERON:0004121!1.13e-07!169;UBERON:0000924!4.07e-07!173;UBERON:0006601!4.07e-07!173|ontology_enrichment_uberon_v019=UBERON:0001871;4.72e-23;6!UBERON:0001950;1.22e-22;20!UBERON:0002771;3.83e-21;2!UBERON:0002619;1.28e-20;22!UBERON:0000956;3.61e-18;25!UBERON:0000203;3.61e-18;25!UBERON:0000200;1.23e-15;6!UBERON:0003528;5.76e-13;34!UBERON:0002020;5.76e-13;34!UBERON:0002791;1.73e-12;32!UBERON:0001869;2.02e-12;32!UBERON:0002171;2.96e-11;1!UBERON:0006518;2.96e-11;1!UBERON:0008949;2.96e-11;1!UBERON:0000101;2.96e-11;1!UBERON:0002167;2.96e-11;1!UBERON:0001893;6.82e-11;34!UBERON:0000073;6.04e-08;53!UBERON:0002616;6.04e-08;53!UBERON:0002780;9.74e-08;41!UBERON:0001890;9.74e-08;41|ontology_enrichment_uberon_v019_2=UBERON:0001871,9.92e-23,6;UBERON:0001950,1.39e-22,20;UBERON:0002771,7.05e-21,2;UBERON:0002619,1.45e-20,22;UBERON:0000956,4.02e-18,25;UBERON:0000203,4.02e-18,25;UBERON:0000200,1.17e-15,6;UBERON:0002791,3.84e-14,32;UBERON:0001869,3.84e-14,32;UBERON:0003528,2.69e-13,34;UBERON:0002020,2.69e-13,34;UBERON:0001893,2.69e-13,34;UBERON:0002171,3.63e-11,1;UBERON:0006518,3.63e-11,1;UBERON:0008949,3.63e-11,1;UBERON:0000101,3.63e-11,1;UBERON:0002167,3.63e-11,1;UBERON:0002780,5.75e-11,41;UBERON:0001890,5.75e-11,41;UBERON:0003080,5.75e-11,41;UBERON:0006240,5.75e-11,41;UBERON:0000073,6.94e-11,53;UBERON:0002616,6.94e-11,53;UBERON:0001049,2.91e-10,56;UBERON:0005068,2.91e-10,56;UBERON:0006241,2.91e-10,56;UBERON:0007135,2.91e-10,56;UBERON:0000955,3.54e-08,68;UBERON:0006238,3.54e-08,68;UBERON:0003056,3.35e-07,61;UBERON:0001017,9.60e-07,81;UBERON:0003075,9.60e-07,82;UBERON:0007284,9.60e-07,82|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.305653622991805,0.164201178899891,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,1.57204305099666,0,0.501559486172034,0.32592226663359,0,0,0,0.883817722424512,0.221533894583621,0.541607727530031,0.25618263945135,0.130059347559878,0.164437904603676,0,0.289803085735052,0.296573126324121,0.802622484269139,0,0.113309342697566,0.383220493601921,0.34362744548263,0.759059076058509,0,0.651083453856419,0,0,0,1.24930726552346,0.236777252044017,0,0.201606743224732,0.802320587350522,0,0,0,0.12786256184353,0,0,0,0,0,0,0.665188192387692,0,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0.757301322732344,0,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0.468008530278475,0,0,0.16798212819886,0,0,0,0,5.41929561685538,0.264145302039678,0.621984346622316,1.58531948758658,1.38866676769018,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0.431255149719035,0.256686072559497,0,0,0.773288812777695,0,0.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30765 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-108bp_to_ENST00000284483,ENST00000357327,ENST00000460047,ENST00000470834,ENST00000475336,ENST00000488470_5end | |||
|description=CAGE_peak_9_at_TNIK_5end | |||
|id=chr3:171177960..171177963,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.03e-18;5!CL:0000163;1.17e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.16e-19,5;CL:0002028,7.16e-19,5;CL:0000163,9.64e-11,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.62e-22!57;UBERON:0005068!1.62e-22!57;UBERON:0006241!1.62e-22!57;UBERON:0007135!1.62e-22!57;UBERON:0001893!3.26e-20!34;UBERON:0002020!3.95e-20!34;UBERON:0003528!3.95e-20!34;UBERON:0002780!7.76e-20!41;UBERON:0001890!7.76e-20!41;UBERON:0006240!7.76e-20!41;UBERON:0002616!9.13e-20!59;UBERON:0002791!1.53e-19!33;UBERON:0001869!2.22e-19!32;UBERON:0003080!4.46e-19!42;UBERON:0005743!8.06e-19!86;UBERON:0001017!1.04e-18!82;UBERON:0003075!5.38e-17!86;UBERON:0007284!5.38e-17!86;UBERON:0000073!8.80e-17!94;UBERON:0001016!8.80e-17!94;UBERON:0007023!1.88e-16!115;UBERON:0000955!2.51e-16!69;UBERON:0006238!2.51e-16!69;UBERON:0001950!1.20e-15!20;UBERON:0002619!1.67e-15!22;UBERON:0002346!1.78e-15!90;UBERON:0000956!3.58e-15!25;UBERON:0000203!3.58e-15!25;UBERON:0003056!5.29e-13!61;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0000025!1.02e-08!194;UBERON:0000033!2.38e-08!123;UBERON:0004121!1.13e-07!169;UBERON:0000924!4.07e-07!173;UBERON:0006601!4.07e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;4.72e-23;6!UBERON:0001950;1.22e-22;20!UBERON:0002771;3.83e-21;2!UBERON:0002619;1.28e-20;22!UBERON:0000956;3.61e-18;25!UBERON:0000203;3.61e-18;25!UBERON:0000200;1.23e-15;6!UBERON:0003528;5.76e-13;34!UBERON:0002020;5.76e-13;34!UBERON:0002791;1.73e-12;32!UBERON:0001869;2.02e-12;32!UBERON:0002171;2.96e-11;1!UBERON:0006518;2.96e-11;1!UBERON:0008949;2.96e-11;1!UBERON:0000101;2.96e-11;1!UBERON:0002167;2.96e-11;1!UBERON:0001893;6.82e-11;34!UBERON:0000073;6.04e-08;53!UBERON:0002616;6.04e-08;53!UBERON:0002780;9.74e-08;41!UBERON:0001890;9.74e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,9.92e-23,6;UBERON:0001950,1.39e-22,20;UBERON:0002771,7.05e-21,2;UBERON:0002619,1.45e-20,22;UBERON:0000956,4.02e-18,25;UBERON:0000203,4.02e-18,25;UBERON:0000200,1.17e-15,6;UBERON:0002791,3.84e-14,32;UBERON:0001869,3.84e-14,32;UBERON:0003528,2.69e-13,34;UBERON:0002020,2.69e-13,34;UBERON:0001893,2.69e-13,34;UBERON:0002171,3.63e-11,1;UBERON:0006518,3.63e-11,1;UBERON:0008949,3.63e-11,1;UBERON:0000101,3.63e-11,1;UBERON:0002167,3.63e-11,1;UBERON:0002780,5.75e-11,41;UBERON:0001890,5.75e-11,41;UBERON:0003080,5.75e-11,41;UBERON:0006240,5.75e-11,41;UBERON:0000073,6.94e-11,53;UBERON:0002616,6.94e-11,53;UBERON:0001049,2.91e-10,56;UBERON:0005068,2.91e-10,56;UBERON:0006241,2.91e-10,56;UBERON:0007135,2.91e-10,56;UBERON:0000955,3.54e-08,68;UBERON:0006238,3.54e-08,68;UBERON:0003056,3.35e-07,61;UBERON:0001017,9.60e-07,81;UBERON:0003075,9.60e-07,82;UBERON:0007284,9.60e-07,82 | |||
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| |||
|short_description=p9@TNIK | |||
}} |
Revision as of 22:43, 12 September 2013
Short description: | p9@TNIK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TNIK_5end |
Coexpression cluster: | NA |
Association with transcript: | -108bp_to_ENST00000284483, ENST00000357327, ENST00000460047, ENST00000470834, ENST00000475336, ENST00000488470_5end |
EntrezGene: | TNIK |
HGNC: | 30765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.16e-19 | 5 |
basophil mast progenitor cell | 7.16e-19 | 5 |
endocrine cell | 9.64e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 9.92e-23 | 6 |
neocortex | 1.39e-22 | 20 |
middle temporal gyrus | 7.05e-21 | 2 |
regional part of cerebral cortex | 1.45e-20 | 22 |
cerebral cortex | 4.02e-18 | 25 |
pallium | 4.02e-18 | 25 |
gyrus | 1.17e-15 | 6 |
regional part of telencephalon | 3.84e-14 | 32 |
cerebral hemisphere | 3.84e-14 | 32 |
brain grey matter | 2.69e-13 | 34 |
gray matter | 2.69e-13 | 34 |
telencephalon | 2.69e-13 | 34 |
lower lobe of right lung | 3.63e-11 | 1 |
right lung lobe | 3.63e-11 | 1 |
lower lobe of lung | 3.63e-11 | 1 |
lobe of lung | 3.63e-11 | 1 |
right lung | 3.63e-11 | 1 |
regional part of forebrain | 5.75e-11 | 41 |
forebrain | 5.75e-11 | 41 |
anterior neural tube | 5.75e-11 | 41 |
future forebrain | 5.75e-11 | 41 |
regional part of nervous system | 6.94e-11 | 53 |
regional part of brain | 6.94e-11 | 53 |
neural tube | 2.91e-10 | 56 |
neural rod | 2.91e-10 | 56 |
future spinal cord | 2.91e-10 | 56 |
neural keel | 2.91e-10 | 56 |
brain | 3.54e-08 | 68 |
future brain | 3.54e-08 | 68 |
pre-chordal neural plate | 3.35e-07 | 61 |
central nervous system | 9.60e-07 | 81 |
neural plate | 9.60e-07 | 82 |
presumptive neural plate | 9.60e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.