FFCP PHASE1:Mm9::chr15:89354183..89354224,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=30|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:89354183..89354224,+|id=chr15:89354183..89354224,+|ontology_enrichment_celltype=CL:0000117!7.56e-08!23;CL:0000337!7.56e-08!23;CL:0000055!3.67e-07!50;CL:0002319!4.21e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.93e-14,23;CL:0000337,3.93e-14,23;CL:0002319,6.79e-12,43;CL:0000221,1.52e-11,44;CL:0000133,1.52e-11,44;CL:0000540,4.34e-09,33;CL:0000047,4.34e-09,33;CL:0000031,4.34e-09,33;CL:0000404,4.34e-09,33;CL:0002610,9.93e-09,3;CL:0002614,1.12e-08,3;CL:0002612,1.26e-08,3;CL:0000393,2.57e-07,39;CL:0000211,2.57e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.21e-17!73;UBERON:0005743!2.21e-17!73;UBERON:0000073!2.50e-17!75;UBERON:0001016!2.50e-17!75;UBERON:0001049!1.62e-16!52;UBERON:0005068!1.62e-16!52;UBERON:0006241!1.62e-16!52;UBERON:0007135!1.62e-16!52;UBERON:0000033!3.03e-16!63;UBERON:0002346!2.34e-15!71;UBERON:0003075!2.34e-15!71;UBERON:0007284!2.34e-15!71;UBERON:0000955!4.77e-15!50;UBERON:0006238!4.77e-15!50;UBERON:0004121!9.95e-15!102;UBERON:0000924!9.95e-15!102;UBERON:0006601!9.95e-15!102;UBERON:0002616!1.94e-14!49;UBERON:0002020!6.74e-12!34;UBERON:0003056!2.79e-11!49;UBERON:0003076!9.00e-10!12;UBERON:0003057!9.00e-10!12;UBERON:0003080!5.26e-09!40;UBERON:0002791!1.17e-08!29;UBERON:0003528!1.17e-08!29;UBERON:0001893!1.17e-08!29;UBERON:0002780!2.16e-08!39;UBERON:0001890!2.16e-08!39;UBERON:0006240!2.16e-08!39;UBERON:0000153!2.57e-08!94;UBERON:0007811!1.16e-07!86;UBERON:0000025!8.29e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.47e-27,73;UBERON:0001016,4.94e-26,75;UBERON:0000073,5.42e-26,54;UBERON:0003076,6.16e-26,12;UBERON:0003057,6.16e-26,12;UBERON:0001049,1.41e-22,52;UBERON:0005068,1.41e-22,52;UBERON:0006241,1.41e-22,52;UBERON:0007135,1.41e-22,52;UBERON:0004121,7.52e-21,95;UBERON:0000924,7.52e-21,95;UBERON:0006601,7.52e-21,95;UBERON:0002346,3.93e-19,64;UBERON:0003075,3.93e-19,64;UBERON:0007284,3.93e-19,64;UBERON:0010371,4.19e-16,73;UBERON:0002240,8.73e-16,6;UBERON:0005174,8.73e-16,6;UBERON:0001137,8.73e-16,6;UBERON:0000955,1.67e-14,47;UBERON:0006238,1.67e-14,47;UBERON:0002616,3.21e-13,46;UBERON:0001948,3.43e-13,5;UBERON:0002315,3.43e-13,5;UBERON:0002020,4.94e-12,34;UBERON:0004733,8.88e-12,6;UBERON:0004732,8.88e-12,6;UBERON:0002028,8.88e-12,6;UBERON:0007277,8.88e-12,6;UBERON:0010314,1.16e-11,92;UBERON:0002950,3.21e-11,4;UBERON:0001891,3.21e-11,4;UBERON:0009616,3.21e-11,4;UBERON:0010286,3.21e-11,4;UBERON:0004684,9.93e-09,3;UBERON:0002275,9.93e-09,3;UBERON:0002038,1.12e-08,3;UBERON:0009663,1.12e-08,3;UBERON:0009661,1.12e-08,3;UBERON:0000125,1.12e-08,3;UBERON:0002308,1.12e-08,3;UBERON:0002257,1.26e-08,3;UBERON:0000025,2.38e-08,114;UBERON:0004111,1.87e-07,122;UBERON:0003080,4.42e-07,40;UBERON:0002037,4.60e-07,4;UBERON:0002680,4.60e-07,4;UBERON:0001895,4.60e-07,4;UBERON:0010092,4.60e-07,4;UBERON:0006215,4.60e-07,4;UBERON:0011216,6.97e-07,194|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.367093504323363,2.34717403304412,0.218025156380447,1.5378032791413,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,1.15265491596466,0.207379224616955,0.135005938331691,0,3.71346279724945,1.76694832761291,0.244981598429908,0.0958454710182364,0,1.10115880999389,9.3211756802187,4.45458946443106,0.791317726381163,0.731901148819277,0,6.42120897703176,1.68828783009504,3.0559649555362,5.00868595305235,3.13217697758026,1.67759501242771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,17.2740670236813,35.6059401582874,0,0,0,0,4.79330046095433,2.28750301409313,0.753926112677186,2.43354048269187,3.06858548796397,5.61027720310812,3.24482526135515,0.407357455401265,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.0680364991513279,0.512454881139399,0.0937017245597288,1.81092359517311,0.431135985865684,0.567318240503458,0.527853372491847,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,4.41608891984667,0.720332286654991,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0.667134131534611,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0.469380496577004,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,3.85321415970701,3.8679856575427,0,0.252470927204373,0,0,0.215423397732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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:89354183..89354224,+ | |||
|id=chr15:89354183..89354224,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.56e-08!23;CL:0000337!7.56e-08!23;CL:0000055!3.67e-07!50;CL:0002319!4.21e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.93e-14,23;CL:0000337,3.93e-14,23;CL:0002319,6.79e-12,43;CL:0000221,1.52e-11,44;CL:0000133,1.52e-11,44;CL:0000540,4.34e-09,33;CL:0000047,4.34e-09,33;CL:0000031,4.34e-09,33;CL:0000404,4.34e-09,33;CL:0002610,9.93e-09,3;CL:0002614,1.12e-08,3;CL:0002612,1.26e-08,3;CL:0000393,2.57e-07,39;CL:0000211,2.57e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.21e-17!73;UBERON:0005743!2.21e-17!73;UBERON:0000073!2.50e-17!75;UBERON:0001016!2.50e-17!75;UBERON:0001049!1.62e-16!52;UBERON:0005068!1.62e-16!52;UBERON:0006241!1.62e-16!52;UBERON:0007135!1.62e-16!52;UBERON:0000033!3.03e-16!63;UBERON:0002346!2.34e-15!71;UBERON:0003075!2.34e-15!71;UBERON:0007284!2.34e-15!71;UBERON:0000955!4.77e-15!50;UBERON:0006238!4.77e-15!50;UBERON:0004121!9.95e-15!102;UBERON:0000924!9.95e-15!102;UBERON:0006601!9.95e-15!102;UBERON:0002616!1.94e-14!49;UBERON:0002020!6.74e-12!34;UBERON:0003056!2.79e-11!49;UBERON:0003076!9.00e-10!12;UBERON:0003057!9.00e-10!12;UBERON:0003080!5.26e-09!40;UBERON:0002791!1.17e-08!29;UBERON:0003528!1.17e-08!29;UBERON:0001893!1.17e-08!29;UBERON:0002780!2.16e-08!39;UBERON:0001890!2.16e-08!39;UBERON:0006240!2.16e-08!39;UBERON:0000153!2.57e-08!94;UBERON:0007811!1.16e-07!86;UBERON:0000025!8.29e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.47e-27,73;UBERON:0001016,4.94e-26,75;UBERON:0000073,5.42e-26,54;UBERON:0003076,6.16e-26,12;UBERON:0003057,6.16e-26,12;UBERON:0001049,1.41e-22,52;UBERON:0005068,1.41e-22,52;UBERON:0006241,1.41e-22,52;UBERON:0007135,1.41e-22,52;UBERON:0004121,7.52e-21,95;UBERON:0000924,7.52e-21,95;UBERON:0006601,7.52e-21,95;UBERON:0002346,3.93e-19,64;UBERON:0003075,3.93e-19,64;UBERON:0007284,3.93e-19,64;UBERON:0010371,4.19e-16,73;UBERON:0002240,8.73e-16,6;UBERON:0005174,8.73e-16,6;UBERON:0001137,8.73e-16,6;UBERON:0000955,1.67e-14,47;UBERON:0006238,1.67e-14,47;UBERON:0002616,3.21e-13,46;UBERON:0001948,3.43e-13,5;UBERON:0002315,3.43e-13,5;UBERON:0002020,4.94e-12,34;UBERON:0004733,8.88e-12,6;UBERON:0004732,8.88e-12,6;UBERON:0002028,8.88e-12,6;UBERON:0007277,8.88e-12,6;UBERON:0010314,1.16e-11,92;UBERON:0002950,3.21e-11,4;UBERON:0001891,3.21e-11,4;UBERON:0009616,3.21e-11,4;UBERON:0010286,3.21e-11,4;UBERON:0004684,9.93e-09,3;UBERON:0002275,9.93e-09,3;UBERON:0002038,1.12e-08,3;UBERON:0009663,1.12e-08,3;UBERON:0009661,1.12e-08,3;UBERON:0000125,1.12e-08,3;UBERON:0002308,1.12e-08,3;UBERON:0002257,1.26e-08,3;UBERON:0000025,2.38e-08,114;UBERON:0004111,1.87e-07,122;UBERON:0003080,4.42e-07,40;UBERON:0002037,4.60e-07,4;UBERON:0002680,4.60e-07,4;UBERON:0001895,4.60e-07,4;UBERON:0010092,4.60e-07,4;UBERON:0006215,4.60e-07,4;UBERON:0011216,6.97e-07,194 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.367093504323363,2.34717403304412,0.218025156380447,1.5378032791413,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,1.15265491596466,0.207379224616955,0.135005938331691,0,3.71346279724945,1.76694832761291,0.244981598429908,0.0958454710182364,0,1.10115880999389,9.3211756802187,4.45458946443106,0.791317726381163,0.731901148819277,0,6.42120897703176,1.68828783009504,3.0559649555362,5.00868595305235,3.13217697758026,1.67759501242771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,17.2740670236813,35.6059401582874,0,0,0,0,4.79330046095433,2.28750301409313,0.753926112677186,2.43354048269187,3.06858548796397,5.61027720310812,3.24482526135515,0.407357455401265,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.0680364991513279,0.512454881139399,0.0937017245597288,1.81092359517311,0.431135985865684,0.567318240503458,0.527853372491847,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,4.41608891984667,0.720332286654991,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0.667134131534611,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0.469380496577004,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,3.85321415970701,3.8679856575427,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0.322928853391811,0.180938774784468,0,0.164140899745061,0,5.37733375830478,0,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0.460325236507177,1.71868654031819,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0,1.03552062350364,0.103787347584177,0.399024873401031,1.02440163452481,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0,0.50695859978048,0,0.280924522409647,0.512201219238954,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0,0,0,0,0,0,0.564656282491984,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.591026894253381,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr15:89354183..89354224,+ | |||
}} |
Revision as of 11:35, 13 September 2013
Short description: | p@chr15:89354183..89354224, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:89354183..89354224, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.93e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.93e-14 | 23 |
neural cell | 6.79e-12 | 43 |
ectodermal cell | 1.52e-11 | 44 |
neurectodermal cell | 1.52e-11 | 44 |
neuron | 4.34e-09 | 33 |
neuronal stem cell | 4.34e-09 | 33 |
neuroblast | 4.34e-09 | 33 |
electrically signaling cell | 4.34e-09 | 33 |
raphe nuclei neuron | 9.93e-09 | 3 |
neuron of the substantia nigra | 1.12e-08 | 3 |
neuron of the ventral spinal cord | 1.26e-08 | 3 |
electrically responsive cell | 2.57e-07 | 39 |
electrically active cell | 2.57e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.