FFCP PHASE1:Hg19::chr8:93115362..93115391,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=862|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1535|TSSclassifier=S|UniProt=Q7Z4J5,Q06455|association_with_transcript=62bp_to_ENST00000523629,NM_001198633,NM_175634_5end|coexpression_cluster_id=C10|description=CAGE_peak_9_at_RUNX1T1_5end|id=chr8:93115362..93115391,-|ontology_enrichment_celltype=CL:0000057!1.39e-08!75;CL:0002620!2.25e-08!23;CL:0000055!8.73e-08!180;CL:0002319!5.54e-07!25|ontology_enrichment_celltype_v019=CL:0000123;2.53e-08;2!CL:0000242;2.53e-08;2|ontology_enrichment_celltype_v019_2=CL:0000242,2.25e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.28e-25!82;UBERON:0000073!2.70e-25!94;UBERON:0001016!2.70e-25!94;UBERON:0005743!2.51e-24!86;UBERON:0007023!4.32e-23!115;UBERON:0001049!3.40e-20!57;UBERON:0005068!3.40e-20!57;UBERON:0006241!3.40e-20!57;UBERON:0007135!3.40e-20!57;UBERON:0000955!2.24e-19!69;UBERON:0006238!2.24e-19!69;UBERON:0002616!1.01e-17!59;UBERON:0001869!2.87e-15!32;UBERON:0001893!1.14e-14!34;UBERON:0004121!1.41e-14!169;UBERON:0003080!1.92e-14!42;UBERON:0002791!3.45e-14!33;UBERON:0000924!4.63e-14!173;UBERON:0006601!4.63e-14!173;UBERON:0003075!4.76e-14!86;UBERON:0007284!4.76e-14!86;UBERON:0002780!7.24e-14!41;UBERON:0001890!7.24e-14!41;UBERON:0006240!7.24e-14!41;UBERON:0002020!8.02e-14!34;UBERON:0003528!8.02e-14!34;UBERON:0002346!3.42e-13!90;UBERON:0002619!6.85e-13!22;UBERON:0000956!1.31e-12!25;UBERON:0000203!1.31e-12!25;UBERON:0001950!1.18e-11!20;UBERON:0000153!1.51e-11!129;UBERON:0007811!1.51e-11!129;UBERON:0000033!1.61e-11!123;UBERON:0000475!1.64e-09!365;UBERON:0003056!2.64e-09!61;UBERON:0000468!8.01e-08!659;UBERON:0003076!4.73e-07!15;UBERON:0003057!4.73e-07!15|ontology_enrichment_uberon_v019=UBERON:0002619;1.75e-10;22!UBERON:0002791;9.91e-10;32!UBERON:0001869;9.96e-10;32!UBERON:0003528;3.49e-09;34!UBERON:0002020;3.49e-09;34!UBERON:0001950;3.73e-09;20!UBERON:0000956;4.46e-09;25!UBERON:0000203;4.46e-09;25!UBERON:0001893;3.70e-08;34!UBERON:0000922;6.13e-08;49!UBERON:0002780;9.99e-07;41!UBERON:0001890;9.99e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.77e-10,22;UBERON:0002791,3.07e-10,32;UBERON:0001869,3.07e-10,32;UBERON:0001016,6.87e-10,89;UBERON:0003528,1.60e-09,34;UBERON:0002020,1.60e-09,34;UBERON:0001893,1.60e-09,34;UBERON:0001950,3.83e-09,20;UBERON:0000956,4.49e-09,25;UBERON:0000203,4.49e-09,25;UBERON:0001017,7.83e-08,81;UBERON:0002780,1.47e-07,41;UBERON:0001890,1.47e-07,41;UBERON:0003080,1.47e-07,41;UBERON:0006240,1.47e-07,41;UBERON:0001049,3.23e-07,56;UBERON:0005068,3.23e-07,56;UBERON:0006241,3.23e-07,56;UBERON:0007135,3.23e-07,56;UBERON:0010371,5.42e-07,104;UBERON:0004121,9.43e-07,171;UBERON:0000924,9.43e-07,171;UBERON:0006601,9.43e-07,171;UBERON:0000013,9.84e-07,5;UBERON:0002410,9.84e-07,5|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0.893922188854576,0,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0.81014194788176,1.07159673940896,1.34717623575702,0.788280363383256,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0.70296429550139,0,0,0,0.587172493218824,0.323745888736263,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0.989067717114227,1.82032272387605,0,0.168336113954066,0.375355559615893,0,0.438977620880838,0,0.300476117813194,0,2.15267562826634,0.85422955527427,0,0.600182192168805,0.515262646192195,1.8034837803194,0.37223371266318,1.18143432568886,0.974370051611986,1.00973509697646,1.28869858099219,0.646584227275248,3.19508633264953,0.705264687593482,0.847802961552438,0,0,0,0.487894824518382,0.530119073285941,0,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,1.3032332212413,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,4.63973287666617,2.01019518401218,1.27587750330633,0,0,0,0.24538298343828,0,0,0.623912584592421,0,0.157702415033935,0.234282829985426,0.601892199455438,0,0,0.664225598535437,0.18436916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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z4J5,Q06455 | |||
|association_with_transcript=62bp_to_ENST00000523629,NM_001198633,NM_175634_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_RUNX1T1_5end | |||
|id=chr8:93115362..93115391,- | |||
|ontology_enrichment_celltype=CL:0000057!1.39e-08!75;CL:0002620!2.25e-08!23;CL:0000055!8.73e-08!180;CL:0002319!5.54e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.53e-08;2!CL:0000242;2.53e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.25e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.28e-25!82;UBERON:0000073!2.70e-25!94;UBERON:0001016!2.70e-25!94;UBERON:0005743!2.51e-24!86;UBERON:0007023!4.32e-23!115;UBERON:0001049!3.40e-20!57;UBERON:0005068!3.40e-20!57;UBERON:0006241!3.40e-20!57;UBERON:0007135!3.40e-20!57;UBERON:0000955!2.24e-19!69;UBERON:0006238!2.24e-19!69;UBERON:0002616!1.01e-17!59;UBERON:0001869!2.87e-15!32;UBERON:0001893!1.14e-14!34;UBERON:0004121!1.41e-14!169;UBERON:0003080!1.92e-14!42;UBERON:0002791!3.45e-14!33;UBERON:0000924!4.63e-14!173;UBERON:0006601!4.63e-14!173;UBERON:0003075!4.76e-14!86;UBERON:0007284!4.76e-14!86;UBERON:0002780!7.24e-14!41;UBERON:0001890!7.24e-14!41;UBERON:0006240!7.24e-14!41;UBERON:0002020!8.02e-14!34;UBERON:0003528!8.02e-14!34;UBERON:0002346!3.42e-13!90;UBERON:0002619!6.85e-13!22;UBERON:0000956!1.31e-12!25;UBERON:0000203!1.31e-12!25;UBERON:0001950!1.18e-11!20;UBERON:0000153!1.51e-11!129;UBERON:0007811!1.51e-11!129;UBERON:0000033!1.61e-11!123;UBERON:0000475!1.64e-09!365;UBERON:0003056!2.64e-09!61;UBERON:0000468!8.01e-08!659;UBERON:0003076!4.73e-07!15;UBERON:0003057!4.73e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.75e-10;22!UBERON:0002791;9.91e-10;32!UBERON:0001869;9.96e-10;32!UBERON:0003528;3.49e-09;34!UBERON:0002020;3.49e-09;34!UBERON:0001950;3.73e-09;20!UBERON:0000956;4.46e-09;25!UBERON:0000203;4.46e-09;25!UBERON:0001893;3.70e-08;34!UBERON:0000922;6.13e-08;49!UBERON:0002780;9.99e-07;41!UBERON:0001890;9.99e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.77e-10,22;UBERON:0002791,3.07e-10,32;UBERON:0001869,3.07e-10,32;UBERON:0001016,6.87e-10,89;UBERON:0003528,1.60e-09,34;UBERON:0002020,1.60e-09,34;UBERON:0001893,1.60e-09,34;UBERON:0001950,3.83e-09,20;UBERON:0000956,4.49e-09,25;UBERON:0000203,4.49e-09,25;UBERON:0001017,7.83e-08,81;UBERON:0002780,1.47e-07,41;UBERON:0001890,1.47e-07,41;UBERON:0003080,1.47e-07,41;UBERON:0006240,1.47e-07,41;UBERON:0001049,3.23e-07,56;UBERON:0005068,3.23e-07,56;UBERON:0006241,3.23e-07,56;UBERON:0007135,3.23e-07,56;UBERON:0010371,5.42e-07,104;UBERON:0004121,9.43e-07,171;UBERON:0000924,9.43e-07,171;UBERON:0006601,9.43e-07,171;UBERON:0000013,9.84e-07,5;UBERON:0002410,9.84e-07,5 | |||
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| |||
|short_description=p9@RUNX1T1 | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p9@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 62bp_to_ENST00000523629, NM_001198633, NM_175634_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | Q7Z4J5Q06455 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.77e-10 | 22 |
regional part of telencephalon | 3.07e-10 | 32 |
cerebral hemisphere | 3.07e-10 | 32 |
nervous system | 6.87e-10 | 89 |
brain grey matter | 1.60e-09 | 34 |
gray matter | 1.60e-09 | 34 |
telencephalon | 1.60e-09 | 34 |
neocortex | 3.83e-09 | 20 |
cerebral cortex | 4.49e-09 | 25 |
pallium | 4.49e-09 | 25 |
central nervous system | 7.83e-08 | 81 |
regional part of forebrain | 1.47e-07 | 41 |
forebrain | 1.47e-07 | 41 |
anterior neural tube | 1.47e-07 | 41 |
future forebrain | 1.47e-07 | 41 |
neural tube | 3.23e-07 | 56 |
neural rod | 3.23e-07 | 56 |
future spinal cord | 3.23e-07 | 56 |
neural keel | 3.23e-07 | 56 |
ecto-epithelium | 5.42e-07 | 104 |
ectoderm-derived structure | 9.43e-07 | 171 |
ectoderm | 9.43e-07 | 171 |
presumptive ectoderm | 9.43e-07 | 171 |
sympathetic nervous system | 9.84e-07 | 5 |
autonomic nervous system | 9.84e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.