FFCP PHASE1:Hg19::chr9:114937764..114937777,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |||
|TSSclassifier=S | |||
|UniProt=Q6UWL2 | |||
|association_with_transcript=-76bp_to_ENST00000374270_5end | |||
|description=CAGE_peak_5_at_SUSD1_5end | |||
|id=chr9:114937764..114937777,- | |||
|ontology_enrichment_celltype=CL:0002057!2.11e-12!42;CL:0000860!2.52e-10!45;CL:0000766!3.96e-09!76;CL:0000557!9.42e-09!71;CL:0000839!1.60e-08!70;CL:0000763!3.29e-08!112;CL:0000049!3.29e-08!112;CL:0002194!7.41e-08!63;CL:0000576!7.41e-08!63;CL:0000040!7.41e-08!63;CL:0000559!7.41e-08!63;CL:0002009!1.12e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:1000449;6.90e-16;15!CL:0002681;1.50e-14;12!CL:0002584;1.50e-14;12!CL:1000497;1.39e-13;17!CL:0002518;1.39e-13;17!CL:0000860;9.08e-11;33!CL:0002057;9.08e-11;33!CL:1000507;1.25e-09;10!CL:1000494;1.25e-09;10!CL:1000746;4.30e-08;7!CL:1000612;4.30e-08;7!CL:0002188;4.46e-08;5!CL:0000473;4.50e-08;39!CL:0000234;4.50e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.78e-16,15;CL:0002681,2.50e-14,12;CL:0002584,2.50e-14,12;CL:1000497,1.71e-13,17;CL:0002518,1.71e-13,17;CL:0000860,4.11e-12,42;CL:0002057,4.11e-12,42;CL:0000473,6.52e-11,48;CL:0000234,6.52e-11,48;CL:0000766,3.96e-10,72;CL:0000763,4.76e-10,108;CL:0000049,4.76e-10,108;CL:1000507,1.02e-09,10;CL:1000494,1.02e-09,10;CL:0000839,1.26e-08,66;CL:0000557,2.11e-08,67;CL:1000746,6.21e-08,7;CL:1000612,6.21e-08,7;CL:0002188,7.65e-08,5;CL:0002194,1.58e-07,59;CL:0000576,1.58e-07,59;CL:0000040,1.58e-07,59;CL:0000559,1.58e-07,59;CL:0002009,4.19e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.76e-11!625;UBERON:0000480!2.85e-11!626;UBERON:0000062!2.28e-10!511;UBERON:0000468!2.31e-09!659;UBERON:0003081!3.70e-08!216;UBERON:0004876!8.87e-08!20;UBERON:0002050!1.16e-07!605;UBERON:0005423!1.16e-07!605;UBERON:0000923!1.37e-07!604;UBERON:0005291!1.37e-07!604;UBERON:0006598!1.37e-07!604;UBERON:0002532!1.37e-07!604;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0000922!2.90e-07!612;UBERON:0000025!3.45e-07!194;UBERON:0000080!3.70e-07!18;UBERON:0002120!3.70e-07!18;UBERON:0004875!3.70e-07!18;UBERON:0005721!3.70e-07!18;UBERON:0005754!3.70e-07!18;UBERON:0007297!3.70e-07!18;UBERON:0000479!4.20e-07!787;UBERON:0002371!5.22e-07!80;UBERON:0002616!6.60e-07!59;UBERON:0000955!7.03e-07!69;UBERON:0006238!7.03e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.90e-16;15!UBERON:0004819;6.90e-16;15!UBERON:0001285;6.90e-16;15!UBERON:0007684;6.90e-16;15!UBERON:0001225;1.50e-14;12!UBERON:0008987;1.50e-14;12!UBERON:0002113;1.35e-11;24!UBERON:0011143;1.35e-11;24!UBERON:0001851;4.64e-11;15!UBERON:0000353;4.64e-11;15!UBERON:0000489;3.17e-10;29!UBERON:0004211;1.25e-09;10!UBERON:0009773;1.25e-09;10!UBERON:0001231;1.25e-09;10!UBERON:0004810;1.25e-09;10!UBERON:0006554;1.80e-08;30!UBERON:0001008;1.80e-08;30!UBERON:0000074;4.30e-08;7!UBERON:0001229;4.30e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.78e-16,15;UBERON:0009773,8.78e-16,15;UBERON:0001231,8.78e-16,15;UBERON:0001285,8.78e-16,15;UBERON:0007684,8.78e-16,15;UBERON:0004208,8.78e-16,15;UBERON:0006555,1.45e-14,16;UBERON:0004819,1.45e-14,16;UBERON:0001225,2.50e-14,12;UBERON:0008987,2.50e-14,12;UBERON:0002113,1.26e-11,26;UBERON:0003918,1.26e-11,26;UBERON:0011143,1.26e-11,26;UBERON:0005095,1.26e-11,26;UBERON:0007687,1.26e-11,26;UBERON:0001851,6.84e-11,15;UBERON:0000353,6.84e-11,15;UBERON:0000489,2.46e-10,31;UBERON:0004810,1.02e-09,10;UBERON:0004876,2.42e-08,11;UBERON:0010532,6.21e-08,7;UBERON:0000074,6.21e-08,7;UBERON:0001229,6.21e-08,7;UBERON:0001230,6.21e-08,7;UBERON:0003220,6.21e-08,7;UBERON:0005749,6.21e-08,7;UBERON:0004199,6.21e-08,7;UBERON:0004209,6.21e-08,7;UBERON:0004198,6.21e-08,7;UBERON:0000080,7.02e-08,9;UBERON:0002120,7.02e-08,9;UBERON:0004875,7.02e-08,9;UBERON:0005721,7.02e-08,9;UBERON:0005754,7.02e-08,9;UBERON:0007297,7.02e-08,9;UBERON:0005103,7.97e-07,8;UBERON:0000083,7.97e-07,8;UBERON:0009201,7.97e-07,8;UBERON:0006553,7.97e-07,8;UBERON:0003074,7.97e-07,8;UBERON:0003060,7.97e-07,8 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.563817616383885,0,0,1.74467704820074,0,0,0,0.737201809504527,2.09340350391728,1.31064823278103,1.58260186937072,0,0,0,0,1.46062018077475,0,0.61560529038394,0.204000691244253,0,0.286235987131057,0.547497700291537,0.376627918784408,0,0,0,2.75354993794233,1.91914699048606,0.619264493264304,0,0.6024118375565,0,0,0,0.293600439334847,4.43196326825502,3.40925560699241,1.95309783644267,0.447830948479849,0,0.515151135268373,0.872389432677388,1.13362783106643,1.21292030593908,1.39457422143411,0.822335776043652,3.09706370895104,0.863077176966451,1.5369642391746,0.945928919554341,0.689491361473237,0,0,1.31769637679823,0.545812300115692,1.34834090667051,0.612167784741805,3.85114832491312,2.55734850319616,0.659702600373432,0.797854630486527,0.426224750532694,4.93355705668593,3.97169657283798,3.73693349397345,1.7587406567972,2.08593167368081,1.08594422352558,1.21079900526674,3.31449872388808,2.21523671208619,0,0.212604299965044,0.628975936525128,0.673971786878971,0.300353785683013,0.803627933485401,0.285012743741249,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0.255973222308837,0,0.473554504088034,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,0.255725123687061,0.722878304769133,0,0.434539556882471,0.795285947051099,0,0.567208902984407,0.221729397462564,0.527008714158756,0.589405839739707,0,0,0,0.522389211897802,0.664789802594326,0,0,0,1.19257444420023,0.860234595106124,1.38856200643038,0,0,0.550236083880135,0.626984899610432,0.516833518338658,0,1.00416183829401,0,0,0,0.735326160691737,0,0.267899184852239,0.898117490504679,0.900891843866578,0,0.949265659568129,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,1.43418310374407,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,0.302714855289863,0.576175924479999,0.70296429550139,0.624320153660641,1.1409436430889,0,0.469737994575059,0.323745888736263,0.702254033511242,0,0.122834317311768,0.723280468230358,0,0.247266929278557,0,0,0.505008341862199,0.250237039743928,0.554128230968366,0,0.30648779579902,0.45071417671979,0.680593098960126,1.79389635688862,0.213557388818567,0.635795703478686,1.80054657650641,0.412210116953756,1.54584324027377,0.744467425326359,1.18143432568886,0.194874010322397,1.51460264546469,1.01254888506529,0.161646056818812,2.4850671476163,0.503760491138201,0.169560592310488,0.386521706326594,1.09098448236334,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,0,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0.579652024875384,1.29149563659404,0.433099343283221,0,0.570762456703795,0,0,1.23108503043699,0.702012795417713,0.743155811443641,0.93733833986777,1.17587489739202,0.850650583454319,0,0,0,2.46331618947972,2.3773077183571,0.621984346622316,0.576479813667846,1.13618190083742,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.2933531432838,0.517086863031111,3.57656445851882,0.845302752556,0,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,1.20575750823834,1.74306691720059,0.899756920638513,0,0.502257091432126,0,0.479249710983165,0,0,0.868687840005475,0,0.716243852959582,0,0.591092280605782,0.646882724578552,0.256686072559497,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,2.07207756718018,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.368738337083406,0.521301686808497,0.391602314925481,0,0.413536052245775,0.215714200818617,0.640365346820666,0,0,0,0.496215615637554,1.68808170616869,0,0.512556597022804,1.02341449813341,0.804269605718038,0,0,0.355123450626254,0.328508624055237,0.519254429183621,0.464841513839837,0.362578348774867,1.00253235151642,0.184161977871793,0.34444334449382,0.364182336013434,0.524497659837696,2.25599806453706,3.61972084390749,1.56869953835371,0,3.16654886678627,1.13733384070897,1.19065593693561,2.37507507712353,1.54227252690289,2.70946437543853,0.501689773854853,1.27438136522519,1.66215201785745,1.11937377361089,0,0,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,3.21367859688319,0.580024309752732,0.462145851343933,0.307007349452259,0.413509717453592,0.322260734604821,0,0.426133137080504,0.0890320356467374,0.661139661443912,0.384380134730212,1.91419068741876,1.4162089319777,0,1.88887408098384,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0.316379424718726,0.953150969619124,0.255897791311334,0,0.636406495851874,0.78494864019923,0.539617372749944,0.274537029736055,0.824686816419805,0.808729926293264,0,0.421258456238981,0,0,2.11300293513511,0.409499734223957,0.424216295861138,0,0.551365343546124,0.663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9,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p5@SUSD1 | |||
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Revision as of 07:00, 14 September 2013
Short description: | p5@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000374270_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | Q6UWL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.78e-16 | 15 |
kidney cortical cell | 2.50e-14 | 12 |
renal cortical epithelial cell | 2.50e-14 | 12 |
kidney cell | 1.71e-13 | 17 |
kidney epithelial cell | 1.71e-13 | 17 |
classical monocyte | 4.11e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.11e-12 | 42 |
defensive cell | 6.52e-11 | 48 |
phagocyte | 6.52e-11 | 48 |
myeloid leukocyte | 3.96e-10 | 72 |
myeloid cell | 4.76e-10 | 108 |
common myeloid progenitor | 4.76e-10 | 108 |
kidney tubule cell | 1.02e-09 | 10 |
nephron tubule epithelial cell | 1.02e-09 | 10 |
myeloid lineage restricted progenitor cell | 1.26e-08 | 66 |
granulocyte monocyte progenitor cell | 2.11e-08 | 67 |
glomerular cell | 6.21e-08 | 7 |
kidney corpuscule cell | 6.21e-08 | 7 |
glomerular endothelial cell | 7.65e-08 | 5 |
monopoietic cell | 1.58e-07 | 59 |
monocyte | 1.58e-07 | 59 |
monoblast | 1.58e-07 | 59 |
promonocyte | 1.58e-07 | 59 |
macrophage dendritic cell progenitor | 4.19e-07 | 61 |
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