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FFCP PHASE1:Mm9::chr5:23857475..23857520,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16511|HGNC=|UniProt=Q53Z09|association_with_transcript=-53bp_to_ENSMUST00000036092,NM_013569,uc008wrc.1_5end|description=CAGE_peak_1_at_Kcnh2_5end|id=chr5:23857475..23857520,-|ontology_enrichment_celltype=CL:0000117!6.24e-08!23;CL:0000337!6.24e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.74e-08,23;CL:0000337,3.74e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.62e-11!71;UBERON:0003075!3.62e-11!71;UBERON:0007284!3.62e-11!71;UBERON:0001049!5.54e-11!52;UBERON:0005068!5.54e-11!52;UBERON:0006241!5.54e-11!52;UBERON:0007135!5.54e-11!52;UBERON:0000955!1.57e-10!50;UBERON:0006238!1.57e-10!50;UBERON:0002616!5.78e-10!49;UBERON:0001017!1.22e-09!73;UBERON:0005743!1.22e-09!73;UBERON:0000033!1.62e-09!63;UBERON:0000073!4.59e-09!75;UBERON:0001016!4.59e-09!75;UBERON:0007100!3.16e-08!18;UBERON:0000948!3.16e-08!18;UBERON:0005498!3.16e-08!18;UBERON:0004140!3.16e-08!18;UBERON:0009881!3.16e-08!18;UBERON:0004141!3.16e-08!18;UBERON:0003084!3.16e-08!18;UBERON:0007005!3.16e-08!18;UBERON:0004139!3.16e-08!18;UBERON:0004291!3.16e-08!18;UBERON:0003080!4.35e-08!40;UBERON:0003056!7.24e-08!49;UBERON:0004121!1.10e-07!102;UBERON:0000924!1.10e-07!102;UBERON:0006601!1.10e-07!102;UBERON:0002780!1.44e-07!39;UBERON:0001890!1.44e-07!39;UBERON:0006240!1.44e-07!39;UBERON:0002020!1.81e-07!34;UBERON:0000025!2.10e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.96e-18,92;UBERON:0000073,1.94e-12,54;UBERON:0001049,2.03e-11,52;UBERON:0005068,2.03e-11,52;UBERON:0006241,2.03e-11,52;UBERON:0007135,2.03e-11,52;UBERON:0002346,4.19e-10,64;UBERON:0003075,4.19e-10,64;UBERON:0007284,4.19e-10,64;UBERON:0001017,1.56e-09,73;UBERON:0000955,1.78e-09,47;UBERON:0006238,1.78e-09,47;UBERON:0002616,6.51e-09,46;UBERON:0001016,8.10e-09,75;UBERON:0003080,1.54e-08,40;UBERON:0003056,2.74e-08,49;UBERON:0007100,4.16e-08,18;UBERON:0000948,4.16e-08,18;UBERON:0005498,4.16e-08,18;UBERON:0004140,4.16e-08,18;UBERON:0009881,4.16e-08,18;UBERON:0004141,4.16e-08,18;UBERON:0003084,4.16e-08,18;UBERON:0007005,4.16e-08,18;UBERON:0004139,4.16e-08,18;UBERON:0004291,4.16e-08,18;UBERON:0002780,5.40e-08,39;UBERON:0001890,5.40e-08,39;UBERON:0006240,5.40e-08,39;UBERON:0002020,6.64e-08,34;UBERON:0000025,1.91e-07,114;UBERON:0010371,4.06e-07,73|phase1_expression=8.80818659076367,0,0,0,0,0.839396359559449,1.63528848416868,1.16210991097419,0.140788722151667,0,0,0,0.856003649656029,0.437102012094987,0,0,0,0.157731082679119,0,0,6.12311689087702,0.595745707205312,0.522399578277871,0.159992422793407,0,0.57423196411502,0,0,0.950117097281869,0,0.443461021310609,15.8757668364908,12.916360539276,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.872100625521786,0,0,0,2.87505128729943,0,0,0.672187598284928,0.257259436035947,0.573066879877513,1.03134418455488,8.9019242778223,10.5798195854407,12.0427966666174,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,2.59224030771194,3.64516033495565,3.36519938162211,9.71213346972932,12.1477697523387,4.77714116938321,3.73797336971122,7.35375029288017,25.3266526298594,14.0456071893706,19.0472101237742,11.6059933202571,13.631658896759,11.9810075228055,20.9387249251036,17.4456409109821,17.5717984943332,16.4992007865254,12.1015928679237,11.9295645328192,0.605809546665472,1.058001841495,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0,3.52108549441701,0,0,0,0,0,0,1.7127581957859,0,13.0629082377046,4.16364784238726,4.87144765299426,5.99600292865752,5.12456977878917,7.2904998424137,8.16832843642891,10.6293836125781,0,0,2.26473589926373,0,0,3.72783522436244,9.07620470735796,8.79676168616511,1.53274233125155,0.11981512450592,0.599902730993408,0,28.1606402081067,11.8950156732843,15.3298309577695,11.298580812498,10.7400492078739,23.6878370797899,18.3332627266566,9.980257657331,2.61254638281195,7.07623723614289,1.68353484709179,3.77349284591841,2.75882525320168,6.48223667299257,4.67184935290717,5.10273743634959,4.09963904911519,3.65436725782942,3.88055056108524,1.72454394346274,3.02569728268511,1.93546236580344,2.6303487891309,2.50242524303038,3.1342694986995,0.823128545631774,9.75267907410617,0,0,0,25.0622184767957,23.9216581180718,18.3663302690235,31.2503050972478,27.7437566763839,24.6827380619805,27.2064715357977,26.0225199357631,31.4098770967686,39.0006844294949,20.5209330098869,35.9945514383599,30.4095973844691,27.8828646419634,38.9198614405078,6.9395683026162,4.73361216944708,0,1.58670339998127,10.8777007772969,13.0052536241846,6.70110798874885,3.83198696784351,4.44756087689741,4.1849637744763,5.69434873853414,1.97638745668813,3.2673577144035,3.97912944082302,4.67913809085888,3.59527763461689,1.72910439899755,2.38969527905241,5.69003702859245,3.65595240351132,3.38123207019241,4.2766778847516,2.71533482034676,2.45475369616115,3.35153646758564,0.738050739898011,0.627994911365499,0.246794327843601,0,1.83529616287703,0.982794975566015,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,0.575392274901621,0.32427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|EntrezGene=16511
|HGNC=
|UniProt=Q53Z09
|association_with_transcript=-53bp_to_ENSMUST00000036092,NM_013569,uc008wrc.1_5end
|description=CAGE_peak_1_at_Kcnh2_5end
|id=chr5:23857475..23857520,-
|ontology_enrichment_celltype=CL:0000117!6.24e-08!23;CL:0000337!6.24e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.74e-08,23;CL:0000337,3.74e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.62e-11!71;UBERON:0003075!3.62e-11!71;UBERON:0007284!3.62e-11!71;UBERON:0001049!5.54e-11!52;UBERON:0005068!5.54e-11!52;UBERON:0006241!5.54e-11!52;UBERON:0007135!5.54e-11!52;UBERON:0000955!1.57e-10!50;UBERON:0006238!1.57e-10!50;UBERON:0002616!5.78e-10!49;UBERON:0001017!1.22e-09!73;UBERON:0005743!1.22e-09!73;UBERON:0000033!1.62e-09!63;UBERON:0000073!4.59e-09!75;UBERON:0001016!4.59e-09!75;UBERON:0007100!3.16e-08!18;UBERON:0000948!3.16e-08!18;UBERON:0005498!3.16e-08!18;UBERON:0004140!3.16e-08!18;UBERON:0009881!3.16e-08!18;UBERON:0004141!3.16e-08!18;UBERON:0003084!3.16e-08!18;UBERON:0007005!3.16e-08!18;UBERON:0004139!3.16e-08!18;UBERON:0004291!3.16e-08!18;UBERON:0003080!4.35e-08!40;UBERON:0003056!7.24e-08!49;UBERON:0004121!1.10e-07!102;UBERON:0000924!1.10e-07!102;UBERON:0006601!1.10e-07!102;UBERON:0002780!1.44e-07!39;UBERON:0001890!1.44e-07!39;UBERON:0006240!1.44e-07!39;UBERON:0002020!1.81e-07!34;UBERON:0000025!2.10e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.96e-18,92;UBERON:0000073,1.94e-12,54;UBERON:0001049,2.03e-11,52;UBERON:0005068,2.03e-11,52;UBERON:0006241,2.03e-11,52;UBERON:0007135,2.03e-11,52;UBERON:0002346,4.19e-10,64;UBERON:0003075,4.19e-10,64;UBERON:0007284,4.19e-10,64;UBERON:0001017,1.56e-09,73;UBERON:0000955,1.78e-09,47;UBERON:0006238,1.78e-09,47;UBERON:0002616,6.51e-09,46;UBERON:0001016,8.10e-09,75;UBERON:0003080,1.54e-08,40;UBERON:0003056,2.74e-08,49;UBERON:0007100,4.16e-08,18;UBERON:0000948,4.16e-08,18;UBERON:0005498,4.16e-08,18;UBERON:0004140,4.16e-08,18;UBERON:0009881,4.16e-08,18;UBERON:0004141,4.16e-08,18;UBERON:0003084,4.16e-08,18;UBERON:0007005,4.16e-08,18;UBERON:0004139,4.16e-08,18;UBERON:0004291,4.16e-08,18;UBERON:0002780,5.40e-08,39;UBERON:0001890,5.40e-08,39;UBERON:0006240,5.40e-08,39;UBERON:0002020,6.64e-08,34;UBERON:0000025,1.91e-07,114;UBERON:0010371,4.06e-07,73
|phase1_expression=8.80818659076367,0,0,0,0,0.839396359559449,1.63528848416868,1.16210991097419,0.140788722151667,0,0,0,0.856003649656029,0.437102012094987,0,0,0,0.157731082679119,0,0,6.12311689087702,0.595745707205312,0.522399578277871,0.159992422793407,0,0.57423196411502,0,0,0.950117097281869,0,0.443461021310609,15.8757668364908,12.916360539276,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.872100625521786,0,0,0,2.87505128729943,0,0,0.672187598284928,0.257259436035947,0.573066879877513,1.03134418455488,8.9019242778223,10.5798195854407,12.0427966666174,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,2.59224030771194,3.64516033495565,3.36519938162211,9.71213346972932,12.1477697523387,4.77714116938321,3.73797336971122,7.35375029288017,25.3266526298594,14.0456071893706,19.0472101237742,11.6059933202571,13.631658896759,11.9810075228055,20.9387249251036,17.4456409109821,17.5717984943332,16.4992007865254,12.1015928679237,11.9295645328192,0.605809546665472,1.058001841495,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0,3.52108549441701,0,0,0,0,0,0,1.7127581957859,0,13.0629082377046,4.16364784238726,4.87144765299426,5.99600292865752,5.12456977878917,7.2904998424137,8.16832843642891,10.6293836125781,0,0,2.26473589926373,0,0,3.72783522436244,9.07620470735796,8.79676168616511,1.53274233125155,0.11981512450592,0.599902730993408,0,28.1606402081067,11.8950156732843,15.3298309577695,11.298580812498,10.7400492078739,23.6878370797899,18.3332627266566,9.980257657331,2.61254638281195,7.07623723614289,1.68353484709179,3.77349284591841,2.75882525320168,6.48223667299257,4.67184935290717,5.10273743634959,4.09963904911519,3.65436725782942,3.88055056108524,1.72454394346274,3.02569728268511,1.93546236580344,2.6303487891309,2.50242524303038,3.1342694986995,0.823128545631774,9.75267907410617,0,0,0,25.0622184767957,23.9216581180718,18.3663302690235,31.2503050972478,27.7437566763839,24.6827380619805,27.2064715357977,26.0225199357631,31.4098770967686,39.0006844294949,20.5209330098869,35.9945514383599,30.4095973844691,27.8828646419634,38.9198614405078,6.9395683026162,4.73361216944708,0,1.58670339998127,10.8777007772969,13.0052536241846,6.70110798874885,3.83198696784351,4.44756087689741,4.1849637744763,5.69434873853414,1.97638745668813,3.2673577144035,3.97912944082302,4.67913809085888,3.59527763461689,1.72910439899755,2.38969527905241,5.69003702859245,3.65595240351132,3.38123207019241,4.2766778847516,2.71533482034676,2.45475369616115,3.35153646758564,0.738050739898011,0.627994911365499,0.246794327843601,0,1.83529616287703,0.982794975566015,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0,0,3.32555742299888,6.253216588426,3.7481944581666,3.56464680127895,2.11221223459652,3.35012514883632,6.18913466303636,5.85400943573396,5.99013547603526,5.3151525515706,7.33491935824441,3.4411296090305,5.00786447411097,2.02508682014116,0,0.54390568381871,0,0.551873492609465,22.7981837782665,22.1530087659264,0.163934945376675,0,0.315508219416257,1.56175497718655,1.93881057959519,0,0.668396022247182,0.283076530788832,0.809621403349789,2.92255857911312,1.58115111178609,34.7027021735552,7.80670468645477,9.97167380536629,8.1443479676788,6.43383479592888,0,6.06951590387454,4.53485335447127,4.14931175462976,4.72483028609236,2.45948118355142,2.06742634534577,1.81766864738753,2.13898427030833,1.26414703174326,0,1.03135543248187,25.8734100372879,2.88097750450096,1.68166288917581,1.92903331528433,6.38424841112185,9.98865378571595,8.88564711251453,15.5277124048446,0,1.0591603543191,0.661585194164886,0.16488625294148,0.807322133479528,0.663442174209714,0.238744688006273,0,3.49777003955821,19.284231409093,0.170870880797853,3.92135049130123,2.03713980106683,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0.419854356970974,0,1.90934123603023,9.49007980743406,7.31950081656655,5.07625101862466,6.690825472463,5.02233896616208,3.64133735239016,5.95104881222419,3.92633912976044,2.20345454596048,0,4.50954350947352,14.353588420222,15.7185565934243,21.7785330945333,14.3367404060282,16.8956125490778,16.0779416944683,14.8432998722103,23.8030711846364,11.1128695579963,8.92893019399383,10.7443781013581,2.43270258348197,1.54066435747241,1.55904987573354,2.8644271306797,3.77494574084403,5.04820887983869,5.46451250545936,5.04832249740738,4.95344243257499,6.35204966362095,7.40679893622118,7.5045236479457,8.41513695707296,0.680191150845634,0.221985953374065,0.986852422704233,1.00730769818447,4.44336066274038,1.50145980360946,4.76194223094889,1.71494703263253,0.501572104035363,9.60078132449013,2.76195141904306,6.87474616127276,6.35856774671644,13.0165678756422,10.5755145634558,8.77529250301348,12.6089936902782,8.15656336171568,5.69536342927002,1.45302286617847,11.5717213286299,4.95127456686989,8.0225216632537,2.72497111416377,5.33146174505041,2.889207461421,4.94484137373346,4.49286893428541,5.81203587056734,7.09742039692671,6.79054828989874,5.61849044819294,4.86591158277006,5.39893408182765,2.85776214769844,4.86714168968393,4.82273051159263,5.35711671044299,3.97437084362873,5.48590803816665,4.79184676630211,3.33810665926249,4.0696996657052,4.70546902076653,4.48457421825885,4.39027134894654,3.15683653725411,5.83957689537206,1.68342681497322,6.4062909787054,5.1222330835293,4.91077251803627,4.33823155320705,3.2794123866794,7.24450676020043,3.27504251823572,5.58664740525576,2.86932498103265,1.32354851471709,1.62307484934295
|short_description=p1@Kcnh2
}}

Revision as of 07:16, 14 September 2013

Short description:p1@Kcnh2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnh2_5end
Coexpression cluster:NA
Association with transcript: -53bp_to_ENSMUST00000036092, NM_013569, uc008wrc.1_5end
EntrezGene:Kcnh2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcnh2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C17.29
adrenal gland, neonate N25.CNhs11223.1377-27I38.17
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A428.16
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F115.33
cortex, adult.CNhs10473.12-14D511.30
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F223.69
diencephalon, neonate N30.CNhs11201.1388-42B218.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C65.10
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I69.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E925.06
heart, embryo E12.CNhs11015.353-12F523.92
heart, embryo E13.CNhs11013.376-3I918.37
heart, embryo E14.CNhs10597.403-26D431.25
heart, embryo E15.CNhs11017.431-16C827.74
heart, embryo E16.CNhs11021.457-17C624.68
heart, embryo E17.CNhs11025.479-18E527.21
heart, embryo E18.CNhs11030.1283-20G326.02
heart, neonate N00.CNhs11213.639-21E331.41
heart, neonate N03.CNhs11221.1349-25I239.00
heart, neonate N10.CNhs11118.749-24G120.52
heart, neonate N16.CNhs11209.782-15G135.99
heart, neonate N20.CNhs11127.821-26I630.41
heart, neonate N25.CNhs11196.1351-25D327.88
heart, neonate N30.CNhs11202.1390-42D238.92
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G14.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D513.01
intestine, embryo E15.CNhs10602.976-16D86.70
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D53.35
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E67.33
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C222.80
medulla oblongata, neonate N30.CNhs11200.1396-42A322.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I934.70
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H79.97
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G825.87
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F69.99
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C919.28
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E39.49
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A95.95
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F514.35
testis, embryo E15.CNhs11034.443-27C515.72
testis, embryo E16.CNhs11033.470-26G521.78
testis, embryo E17.CNhs11029.486-18I514.34
testis, embryo E18.CNhs11027.503-18G516.90
testis, neonate N00.CNhs11189.1300-22B716.08
testis, neonate N07.CNhs11222.726-26I414.84
testis, neonate N10.CNhs11204.763-44D923.80
testis, neonate N20.CNhs11110.839-18H311.11
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F85.05
thymus, neonate N03.CNhs11137.2104-43C75.46
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D34.95
thymus, neonate N10.CNhs11194.748-24E46.35
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G77.50
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.74e-0823
neuroblast (sensu Vertebrata)3.74e-0823

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.96e-1892
regional part of nervous system1.94e-1254
neural tube2.03e-1152
neural rod2.03e-1152
future spinal cord2.03e-1152
neural keel2.03e-1152
neurectoderm4.19e-1064
neural plate4.19e-1064
presumptive neural plate4.19e-1064
central nervous system1.56e-0973
brain1.78e-0947
future brain1.78e-0947
regional part of brain6.51e-0946
nervous system8.10e-0975
anterior neural tube1.54e-0840
pre-chordal neural plate2.74e-0849
primary circulatory organ4.16e-0818
heart4.16e-0818
primitive heart tube4.16e-0818
primary heart field4.16e-0818
anterior lateral plate mesoderm4.16e-0818
heart tube4.16e-0818
heart primordium4.16e-0818
cardiac mesoderm4.16e-0818
cardiogenic plate4.16e-0818
heart rudiment4.16e-0818
regional part of forebrain5.40e-0839
forebrain5.40e-0839
future forebrain5.40e-0839
gray matter6.64e-0834
tube1.91e-07114
ecto-epithelium4.06e-0773







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