FFCP PHASE1:Mm9::chr6:127403685..127403703,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=101187|HGNC=|UniProt=Q8CFF0|association_with_transcript=0bp_to_ENSMUST00000112193_5end|description=CAGE_peak_2_at_Parp11_5end|id=chr6:127403685..127403703,+|ontology_enrichment_celltype=CL:0000117!6.81e-11!23;CL:0000337!6.81e-11!23;CL:0000540!9.15e-09!33;CL:0000047!9.15e-09!33;CL:0000031!9.15e-09!33;CL:0000404!9.15e-09!33;CL:0000393!8.30e-07!39;CL:0000211!8.30e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.28e-13,23;CL:0000337,6.28e-13,23;CL:0000540,9.73e-10,33;CL:0000047,9.73e-10,33;CL:0000031,9.73e-10,33;CL:0000404,9.73e-10,33;CL:0000393,6.53e-07,39;CL:0000211,6.53e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.34e-13!94;UBERON:0007811!5.33e-12!86;UBERON:0002346!8.17e-11!71;UBERON:0003075!8.17e-11!71;UBERON:0007284!8.17e-11!71;UBERON:0003056!2.90e-10!49;UBERON:0001049!3.07e-10!52;UBERON:0005068!3.07e-10!52;UBERON:0006241!3.07e-10!52;UBERON:0007135!3.07e-10!52;UBERON:0001017!1.13e-09!73;UBERON:0005743!1.13e-09!73;UBERON:0000073!3.67e-09!75;UBERON:0001016!3.67e-09!75;UBERON:0003080!9.23e-09!40;UBERON:0000033!1.89e-08!63;UBERON:0002780!2.08e-08!39;UBERON:0001890!2.08e-08!39;UBERON:0006240!2.08e-08!39;UBERON:0002020!2.50e-08!34;UBERON:0000955!8.49e-08!50;UBERON:0006238!8.49e-08!50;UBERON:0002616!1.21e-07!49;UBERON:0004121!1.36e-07!102;UBERON:0000924!1.36e-07!102;UBERON:0006601!1.36e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.31e-12,64;UBERON:0003075,3.31e-12,64;UBERON:0007284,3.31e-12,64;UBERON:0001049,3.25e-11,52;UBERON:0005068,3.25e-11,52;UBERON:0006241,3.25e-11,52;UBERON:0007135,3.25e-11,52;UBERON:0000073,4.98e-11,54;UBERON:0003056,5.36e-11,49;UBERON:0001017,1.04e-10,73;UBERON:0001016,6.78e-10,75;UBERON:0003080,3.04e-09,40;UBERON:0010371,3.83e-09,73;UBERON:0002020,4.33e-09,34;UBERON:0002780,7.67e-09,39;UBERON:0001890,7.67e-09,39;UBERON:0006240,7.67e-09,39;UBERON:0000955,1.27e-08,47;UBERON:0006238,1.27e-08,47;UBERON:0002616,1.91e-08,46;UBERON:0004121,2.94e-08,95;UBERON:0000924,2.94e-08,95;UBERON:0006601,2.94e-08,95|phase1_expression=1.12104192973356,0,0,0,0,0.503637815735669,0.467225281191051,3.61545305636414,0.703943610758334,0.936258105287974,0.68487187290202,1.03703806693937,3.93761678841773,3.75907730401689,0.333109761815663,0.404950534779652,0,1.89277299214943,2.74228867211478,3.39511721438424,2.46625541438102,1.48936426801328,3.6567970479451,0.47997726838022,0.45881856213434,0,0,0.646413698057667,0.190023419456374,1.00812051903972,0.443461021310609,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,2.09265815368454,0.7813353445238,1.0470474879476,2.94115744015507,0.683045484958446,0.971020706062307,0.881277725829041,1.01376931219515,0.734187008646726,0,1.09012578190223,1.5378032791413,0.388859798148567,0.419959264876088,0,2.68452169692378,0.725362142011344,0.672187598284928,0.514518872071894,0.573066879877513,0.515672092277442,7.28339259094552,9.52183762689659,9.50747105259269,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,1.15265491596466,6.32506635081714,5.67024940993101,3.78584930432488,2.85650984403804,3.09215957332259,7.22695715368229,6.80502844229478,7.35375029288017,0,2.042997409363,1.99688493233117,7.51751840062105,9.60620257825301,8.33461392890816,1.11673199600552,2.25105044012672,1.98637722109853,2.65165726926301,7.83044244395066,5.59198337475902,0.605809546665472,0.68014404096107,0.579728977403356,0.860423876981386,0,0.539703191637817,0,0,1.68533304158102,0.852151612890289,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.79928715803342,2.84831672011889,0.593768556259299,2.08182392119363,1.21786191324856,1.38369298353635,0.904335843315735,0.823120949949934,0.628332956648377,0.247194967734374,0.722996784599558,0.884610551949874,0.161766849947409,1.32504911076236,0.484875253135222,0,1.46390398505774,1.67557365450764,0.510914110417183,0.958520996047362,0,0.254140454146129,2.54644086988199,1.37250180845588,4.64921102817598,2.43354048269187,3.06858548796397,1.87009240103604,2.10913641988085,1.52759045775474,1.24406970610093,1.0108910337347,0.420883711772948,3.77349284591841,2.5289231487682,1.44049703844279,3.16480117455002,2.10913147369116,3.45907044769094,2.62364828767241,0.517406741478031,1.72454394346274,2.26927296201383,2.63926686245923,1.31517439456545,2.50242524303038,0,1.23469281844766,1.79130840136644,0,0.51469581422943,0,0.828503090142008,1.40715635988658,1.2604344302271,0.710234206755631,0.983821158737019,0.308534225774757,0.930135779001631,0.268273401399619,0.350296027101508,0.658239399653922,1.31333971263276,0.648550476366846,0.584799949701329,0.219550115291051,0.134206418760372,2.10289948564127,5.76265829323993,0,0.264450566663544,1.06644125267617,1.39342003116263,0.644337306610467,1.61346819698674,0.667134131534611,0.951128130562796,0,0.329397909448022,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0.216138049874694,0.398282546508734,0.379335801906163,2.05647322697512,0,1.22190796707189,0.775809948670503,0.911765658574141,1.3912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| ||
|EntrezGene=101187 | |||
|HGNC= | |||
|UniProt=Q8CFF0 | |||
|association_with_transcript=0bp_to_ENSMUST00000112193_5end | |||
|description=CAGE_peak_2_at_Parp11_5end | |||
|id=chr6:127403685..127403703,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.81e-11!23;CL:0000337!6.81e-11!23;CL:0000540!9.15e-09!33;CL:0000047!9.15e-09!33;CL:0000031!9.15e-09!33;CL:0000404!9.15e-09!33;CL:0000393!8.30e-07!39;CL:0000211!8.30e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.28e-13,23;CL:0000337,6.28e-13,23;CL:0000540,9.73e-10,33;CL:0000047,9.73e-10,33;CL:0000031,9.73e-10,33;CL:0000404,9.73e-10,33;CL:0000393,6.53e-07,39;CL:0000211,6.53e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.34e-13!94;UBERON:0007811!5.33e-12!86;UBERON:0002346!8.17e-11!71;UBERON:0003075!8.17e-11!71;UBERON:0007284!8.17e-11!71;UBERON:0003056!2.90e-10!49;UBERON:0001049!3.07e-10!52;UBERON:0005068!3.07e-10!52;UBERON:0006241!3.07e-10!52;UBERON:0007135!3.07e-10!52;UBERON:0001017!1.13e-09!73;UBERON:0005743!1.13e-09!73;UBERON:0000073!3.67e-09!75;UBERON:0001016!3.67e-09!75;UBERON:0003080!9.23e-09!40;UBERON:0000033!1.89e-08!63;UBERON:0002780!2.08e-08!39;UBERON:0001890!2.08e-08!39;UBERON:0006240!2.08e-08!39;UBERON:0002020!2.50e-08!34;UBERON:0000955!8.49e-08!50;UBERON:0006238!8.49e-08!50;UBERON:0002616!1.21e-07!49;UBERON:0004121!1.36e-07!102;UBERON:0000924!1.36e-07!102;UBERON:0006601!1.36e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.31e-12,64;UBERON:0003075,3.31e-12,64;UBERON:0007284,3.31e-12,64;UBERON:0001049,3.25e-11,52;UBERON:0005068,3.25e-11,52;UBERON:0006241,3.25e-11,52;UBERON:0007135,3.25e-11,52;UBERON:0000073,4.98e-11,54;UBERON:0003056,5.36e-11,49;UBERON:0001017,1.04e-10,73;UBERON:0001016,6.78e-10,75;UBERON:0003080,3.04e-09,40;UBERON:0010371,3.83e-09,73;UBERON:0002020,4.33e-09,34;UBERON:0002780,7.67e-09,39;UBERON:0001890,7.67e-09,39;UBERON:0006240,7.67e-09,39;UBERON:0000955,1.27e-08,47;UBERON:0006238,1.27e-08,47;UBERON:0002616,1.91e-08,46;UBERON:0004121,2.94e-08,95;UBERON:0000924,2.94e-08,95;UBERON:0006601,2.94e-08,95 | |||
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| |||
|short_description=p2@Parp11 | |||
}} |
Revision as of 08:59, 14 September 2013
Short description: | p2@Parp11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Parp11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000112193_5end |
EntrezGene: | Parp11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.28e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.28e-13 | 23 |
neuron | 9.73e-10 | 33 |
neuronal stem cell | 9.73e-10 | 33 |
neuroblast | 9.73e-10 | 33 |
electrically signaling cell | 9.73e-10 | 33 |
electrically responsive cell | 6.53e-07 | 39 |
electrically active cell | 6.53e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.31e-12 | 64 |
neural plate | 3.31e-12 | 64 |
presumptive neural plate | 3.31e-12 | 64 |
neural tube | 3.25e-11 | 52 |
neural rod | 3.25e-11 | 52 |
future spinal cord | 3.25e-11 | 52 |
neural keel | 3.25e-11 | 52 |
regional part of nervous system | 4.98e-11 | 54 |
pre-chordal neural plate | 5.36e-11 | 49 |
central nervous system | 1.04e-10 | 73 |
nervous system | 6.78e-10 | 75 |
anterior neural tube | 3.04e-09 | 40 |
ecto-epithelium | 3.83e-09 | 73 |
gray matter | 4.33e-09 | 34 |
regional part of forebrain | 7.67e-09 | 39 |
forebrain | 7.67e-09 | 39 |
future forebrain | 7.67e-09 | 39 |
brain | 1.27e-08 | 47 |
future brain | 1.27e-08 | 47 |
regional part of brain | 1.91e-08 | 46 |
ectoderm-derived structure | 2.94e-08 | 95 |
ectoderm | 2.94e-08 | 95 |
presumptive ectoderm | 2.94e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.