FFCP PHASE1:Mm9::chr6:41492563..41492580,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:41492563..41492580,+|id=chr6:41492563..41492580,+|ontology_enrichment_celltype=CL:0000791!2.43e-08!9;CL:0000789!2.43e-08!9;CL:0002420!2.43e-08!9;CL:0002419!2.43e-08!9;CL:0000790!2.43e-08!9;CL:0000624!1.27e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,1.17e-16,9;CL:0000789,1.17e-16,9;CL:0002420,1.17e-16,9;CL:0002419,1.17e-16,9;CL:0000790,1.17e-16,9;CL:0000624,4.63e-15,8;CL:0000084,3.00e-13,11;CL:0000827,3.00e-13,11;CL:0000838,5.67e-12,12;CL:0000893,1.49e-11,6;CL:0002489,1.49e-11,6;CL:0000898,1.49e-11,6;CL:0000809,1.49e-11,6;CL:0000810,1.49e-11,6;CL:0000895,1.49e-11,6;CL:0000808,1.49e-11,6;CL:0000894,1.49e-11,6;CL:0000806,1.49e-11,6;CL:0000807,1.49e-11,6;CL:0000805,1.49e-11,6;CL:0002425,1.49e-11,6;CL:0002436,1.49e-11,6;CL:0002427,1.49e-11,6;CL:0002428,1.49e-11,6;CL:0002429,1.49e-11,6;CL:0002433,1.49e-11,6;CL:0002431,1.49e-11,6;CL:0002432,1.49e-11,6;CL:0000542,6.80e-11,13;CL:0000051,6.80e-11,13;CL:0002031,5.91e-10,25;CL:0000738,7.33e-08,17;CL:0002087,7.33e-08,17;CL:0000988,4.24e-07,32;CL:0002032,4.24e-07,32;CL:0000037,4.24e-07,32;CL:0000837,4.24e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.64e-17!29;UBERON:0002370!8.69e-14!23;UBERON:0000974!8.69e-14!23;UBERON:0004807!8.69e-14!23;UBERON:0005058!8.69e-14!23;UBERON:0003351!8.69e-14!23;UBERON:0009113!8.69e-14!23;UBERON:0003295!8.69e-14!23;UBERON:0009722!8.69e-14!23;UBERON:0005562!8.69e-14!23;UBERON:0007690!8.69e-14!23;UBERON:0001007!2.08e-13!128;UBERON:0001555!2.08e-13!128;UBERON:0007026!2.08e-13!128;UBERON:0002193!3.52e-13!48;UBERON:0006562!8.58e-13!24;UBERON:0003408!8.58e-13!24;UBERON:0001557!8.58e-13!24;UBERON:0001042!8.58e-13!24;UBERON:0008814!8.58e-13!24;UBERON:0009145!8.58e-13!24;UBERON:0004119!8.80e-13!130;UBERON:0000925!8.80e-13!130;UBERON:0006595!8.80e-13!130;UBERON:0004921!1.06e-12!126;UBERON:0004185!1.06e-12!126;UBERON:0002390!8.03e-12!45;UBERON:0003061!8.03e-12!45;UBERON:0001041!5.37e-11!92;UBERON:0000065!7.90e-11!41;UBERON:0005057!1.28e-10!51;UBERON:0000072!2.70e-10!27;UBERON:0001004!2.81e-10!42;UBERON:0002405!1.17e-09!70;UBERON:0000077!2.08e-09!97;UBERON:0000063!7.44e-08!35|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.39e-36,29;UBERON:0005057,1.39e-36,29;UBERON:0002370,2.31e-31,23;UBERON:0000974,2.31e-31,23;UBERON:0004807,2.31e-31,23;UBERON:0005058,2.31e-31,23;UBERON:0003351,2.31e-31,23;UBERON:0009113,2.31e-31,23;UBERON:0003295,2.31e-31,23;UBERON:0009722,2.31e-31,23;UBERON:0005562,2.31e-31,23;UBERON:0007690,2.31e-31,23;UBERON:0002193,5.82e-31,48;UBERON:0002405,5.82e-31,48;UBERON:0006562,8.31e-30,24;UBERON:0003408,8.31e-30,24;UBERON:0001557,8.31e-30,24;UBERON:0001042,8.31e-30,24;UBERON:0008814,8.31e-30,24;UBERON:0009145,8.31e-30,24;UBERON:0002390,4.10e-29,45;UBERON:0003061,4.10e-29,45;UBERON:0000077,4.45e-29,35;UBERON:0000072,7.79e-26,27;UBERON:0000065,5.49e-20,41;UBERON:0001004,2.35e-19,42;UBERON:0007811,6.49e-18,36;UBERON:0000153,4.54e-14,43;UBERON:0001041,1.01e-12,80;UBERON:0001007,5.46e-12,116;UBERON:0001555,5.46e-12,116;UBERON:0007026,5.46e-12,116;UBERON:0004119,1.24e-11,118;UBERON:0000925,1.24e-11,118;UBERON:0006595,1.24e-11,118;UBERON:0004921,1.73e-11,114;UBERON:0003081,2.85e-11,87;UBERON:0003929,6.66e-11,55;UBERON:0002368,1.23e-10,60;UBERON:0002530,2.30e-10,65;UBERON:0005911,2.68e-10,69;UBERON:0000949,9.69e-09,72;UBERON:0000490,3.69e-08,66;UBERON:0000926,7.45e-07,120;UBERON:0004120,7.45e-07,120;UBERON:0006603,7.45e-07,120|phase1_expression=0,0,0,0,0,0,0,71.1469512163085,9.43284438416167,17.7889040004715,8.04724450659873,5.2649624936922,64.3714744541333,81.2135538472486,0.666219523631325,1.01237633694913,0,4.88966356305268,4.11343300817216,5.94145512517242,1.7008658030214,0,0,0.319984845586813,1.14704640533585,0,0,0,1.33016393619462,1.51218077855958,1.77384408524244,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,26.1130371124084,15.7964085596958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.25602267690966,7.76813650941515,0.29688427812965,2.08182392119363,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0,0,0,0.700592054203017,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.402619256281115,0.210289948564127,0,1.32167513193519,0.528901133327089,0,0,0.38660238396628,0.80673409849337,0.22237804384487,0.760902504450237,0,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0.393117990226406,0,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0,0.179397413521912,0,1.66277871149944,0.189491411770485,0,0,0,1.50755631697634,0,0.195133647857799,0.630540576424764,0.221464689648775,0.478364305972461,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0.485561272309963,0.302323556964751,0.754420319023592,1.18120757152309,0.922305443831782,0.775284879504663,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0.238744688006273,0.164140899745061,0.582961673259701,0,2.05045056957423,1.65109494370578,1.29636169158798,1.31857919903284,0.956859594047176,1.14389086603261,0,0.139951452323658,0.690999869022119,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,56.8820017130721,80.8873609007755,95.0076353774652,69.8974027620537,59.4368629616038,45.4980302449097,50.001307000307,50.65750782088,59.6711719193552,43.3616729866949,56.3618374914939,48.0467352046979,48.6831918700067,44.5300997311778,0,0,0,0,0,0.563047426353546,0,0,0,1.12950368523413,0.920650473014354,0,0,0.685082519770642,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0.290692833264657,0,0.338458431566706,0,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0,0.385813221962283,0,1.16965804222704,0.214871054048298,0,0.441182838239031,0.231867835620421|short_description=p@chr6:41492563..41492580,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:41492563..41492580,+ | |||
|id=chr6:41492563..41492580,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.43e-08!9;CL:0000789!2.43e-08!9;CL:0002420!2.43e-08!9;CL:0002419!2.43e-08!9;CL:0000790!2.43e-08!9;CL:0000624!1.27e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.17e-16,9;CL:0000789,1.17e-16,9;CL:0002420,1.17e-16,9;CL:0002419,1.17e-16,9;CL:0000790,1.17e-16,9;CL:0000624,4.63e-15,8;CL:0000084,3.00e-13,11;CL:0000827,3.00e-13,11;CL:0000838,5.67e-12,12;CL:0000893,1.49e-11,6;CL:0002489,1.49e-11,6;CL:0000898,1.49e-11,6;CL:0000809,1.49e-11,6;CL:0000810,1.49e-11,6;CL:0000895,1.49e-11,6;CL:0000808,1.49e-11,6;CL:0000894,1.49e-11,6;CL:0000806,1.49e-11,6;CL:0000807,1.49e-11,6;CL:0000805,1.49e-11,6;CL:0002425,1.49e-11,6;CL:0002436,1.49e-11,6;CL:0002427,1.49e-11,6;CL:0002428,1.49e-11,6;CL:0002429,1.49e-11,6;CL:0002433,1.49e-11,6;CL:0002431,1.49e-11,6;CL:0002432,1.49e-11,6;CL:0000542,6.80e-11,13;CL:0000051,6.80e-11,13;CL:0002031,5.91e-10,25;CL:0000738,7.33e-08,17;CL:0002087,7.33e-08,17;CL:0000988,4.24e-07,32;CL:0002032,4.24e-07,32;CL:0000037,4.24e-07,32;CL:0000837,4.24e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.64e-17!29;UBERON:0002370!8.69e-14!23;UBERON:0000974!8.69e-14!23;UBERON:0004807!8.69e-14!23;UBERON:0005058!8.69e-14!23;UBERON:0003351!8.69e-14!23;UBERON:0009113!8.69e-14!23;UBERON:0003295!8.69e-14!23;UBERON:0009722!8.69e-14!23;UBERON:0005562!8.69e-14!23;UBERON:0007690!8.69e-14!23;UBERON:0001007!2.08e-13!128;UBERON:0001555!2.08e-13!128;UBERON:0007026!2.08e-13!128;UBERON:0002193!3.52e-13!48;UBERON:0006562!8.58e-13!24;UBERON:0003408!8.58e-13!24;UBERON:0001557!8.58e-13!24;UBERON:0001042!8.58e-13!24;UBERON:0008814!8.58e-13!24;UBERON:0009145!8.58e-13!24;UBERON:0004119!8.80e-13!130;UBERON:0000925!8.80e-13!130;UBERON:0006595!8.80e-13!130;UBERON:0004921!1.06e-12!126;UBERON:0004185!1.06e-12!126;UBERON:0002390!8.03e-12!45;UBERON:0003061!8.03e-12!45;UBERON:0001041!5.37e-11!92;UBERON:0000065!7.90e-11!41;UBERON:0005057!1.28e-10!51;UBERON:0000072!2.70e-10!27;UBERON:0001004!2.81e-10!42;UBERON:0002405!1.17e-09!70;UBERON:0000077!2.08e-09!97;UBERON:0000063!7.44e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.39e-36,29;UBERON:0005057,1.39e-36,29;UBERON:0002370,2.31e-31,23;UBERON:0000974,2.31e-31,23;UBERON:0004807,2.31e-31,23;UBERON:0005058,2.31e-31,23;UBERON:0003351,2.31e-31,23;UBERON:0009113,2.31e-31,23;UBERON:0003295,2.31e-31,23;UBERON:0009722,2.31e-31,23;UBERON:0005562,2.31e-31,23;UBERON:0007690,2.31e-31,23;UBERON:0002193,5.82e-31,48;UBERON:0002405,5.82e-31,48;UBERON:0006562,8.31e-30,24;UBERON:0003408,8.31e-30,24;UBERON:0001557,8.31e-30,24;UBERON:0001042,8.31e-30,24;UBERON:0008814,8.31e-30,24;UBERON:0009145,8.31e-30,24;UBERON:0002390,4.10e-29,45;UBERON:0003061,4.10e-29,45;UBERON:0000077,4.45e-29,35;UBERON:0000072,7.79e-26,27;UBERON:0000065,5.49e-20,41;UBERON:0001004,2.35e-19,42;UBERON:0007811,6.49e-18,36;UBERON:0000153,4.54e-14,43;UBERON:0001041,1.01e-12,80;UBERON:0001007,5.46e-12,116;UBERON:0001555,5.46e-12,116;UBERON:0007026,5.46e-12,116;UBERON:0004119,1.24e-11,118;UBERON:0000925,1.24e-11,118;UBERON:0006595,1.24e-11,118;UBERON:0004921,1.73e-11,114;UBERON:0003081,2.85e-11,87;UBERON:0003929,6.66e-11,55;UBERON:0002368,1.23e-10,60;UBERON:0002530,2.30e-10,65;UBERON:0005911,2.68e-10,69;UBERON:0000949,9.69e-09,72;UBERON:0000490,3.69e-08,66;UBERON:0000926,7.45e-07,120;UBERON:0004120,7.45e-07,120;UBERON:0006603,7.45e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,71.1469512163085,9.43284438416167,17.7889040004715,8.04724450659873,5.2649624936922,64.3714744541333,81.2135538472486,0.666219523631325,1.01237633694913,0,4.88966356305268,4.11343300817216,5.94145512517242,1.7008658030214,0,0,0.319984845586813,1.14704640533585,0,0,0,1.33016393619462,1.51218077855958,1.77384408524244,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,26.1130371124084,15.7964085596958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.25602267690966,7.76813650941515,0.29688427812965,2.08182392119363,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0,0,0,0.700592054203017,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.402619256281115,0.210289948564127,0,1.32167513193519,0.528901133327089,0,0,0.38660238396628,0.80673409849337,0.22237804384487,0.760902504450237,0,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0.393117990226406,0,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0,0.179397413521912,0,1.66277871149944,0.189491411770485,0,0,0,1.50755631697634,0,0.195133647857799,0.630540576424764,0.221464689648775,0.478364305972461,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0.485561272309963,0.302323556964751,0.754420319023592,1.18120757152309,0.922305443831782,0.775284879504663,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0.238744688006273,0.164140899745061,0.582961673259701,0,2.05045056957423,1.65109494370578,1.29636169158798,1.31857919903284,0.956859594047176,1.14389086603261,0,0.139951452323658,0.690999869022119,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,56.8820017130721,80.8873609007755,95.0076353774652,69.8974027620537,59.4368629616038,45.4980302449097,50.001307000307,50.65750782088,59.6711719193552,43.3616729866949,56.3618374914939,48.0467352046979,48.6831918700067,44.5300997311778,0,0,0,0,0,0.563047426353546,0,0,0,1.12950368523413,0.920650473014354,0,0,0.685082519770642,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0.290692833264657,0,0.338458431566706,0,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0,0.385813221962283,0,1.16965804222704,0.214871054048298,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr6:41492563..41492580,+ | |||
}} |
Revision as of 09:55, 14 September 2013
Short description: | p@chr6:41492563..41492580, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:41492563..41492580, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.