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FFCP PHASE1:Mm9::chr6:6831928..6831949,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=13395|HGNC=|UniProt=P70396,Q3TYA7|association_with_transcript=118bp_to_ENSMUST00000142635,NM_010056,NM_198854,uc009awy.1,uc009awz.1_5end|description=CAGE_peak_3_at_Dlx5_5end|id=chr6:6831928..6831949,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,7.97e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003080!1.67e-10!40;UBERON:0002780!2.59e-10!39;UBERON:0001890!2.59e-10!39;UBERON:0006240!2.59e-10!39;UBERON:0002791!1.27e-09!29;UBERON:0003528!1.27e-09!29;UBERON:0001893!1.27e-09!29;UBERON:0003056!1.86e-09!49;UBERON:0000955!3.40e-08!50;UBERON:0006238!3.40e-08!50;UBERON:0000033!1.25e-07!63;UBERON:0002616!1.29e-07!49;UBERON:0002020!2.13e-07!34;UBERON:0000026!2.18e-07!13;UBERON:0004708!2.18e-07!13;UBERON:0002101!2.18e-07!13;UBERON:0004357!2.18e-07!13;UBERON:0009872!2.18e-07!13;UBERON:0004347!2.18e-07!13;UBERON:0005732!2.18e-07!13;UBERON:0005733!2.18e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.65e-13,29;UBERON:0002791,2.65e-13,29;UBERON:0001893,2.65e-13,29;UBERON:0002780,1.15e-11,39;UBERON:0001890,1.15e-11,39;UBERON:0006240,1.15e-11,39;UBERON:0000026,2.89e-11,12;UBERON:0004708,2.89e-11,12;UBERON:0002101,2.89e-11,12;UBERON:0004357,2.89e-11,12;UBERON:0004347,2.89e-11,12;UBERON:0005732,2.89e-11,12;UBERON:0005733,2.89e-11,12;UBERON:0003080,3.61e-11,40;UBERON:0002020,2.72e-10,34;UBERON:0010707,4.08e-10,13;UBERON:0000956,1.55e-09,21;UBERON:0001869,1.55e-09,21;UBERON:0000203,1.55e-09,21;UBERON:0000955,1.81e-09,47;UBERON:0006238,1.81e-09,47;UBERON:0002616,1.09e-08,46;UBERON:0003056,1.06e-07,49;UBERON:0002102,1.20e-07,7;UBERON:0004710,1.20e-07,7;UBERON:0005419,1.20e-07,7;UBERON:0005417,1.20e-07,7;UBERON:0005729,1.20e-07,7;UBERON:0002619,3.38e-07,17;UBERON:0000369,4.89e-07,5;UBERON:0002435,4.89e-07,5;UBERON:0000204,4.89e-07,5;UBERON:0010082,4.89e-07,5;UBERON:0001049,7.65e-07,52;UBERON:0005068,7.65e-07,52;UBERON:0006241,7.65e-07,52;UBERON:0007135,7.65e-07,52|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,1.92109152660777,2.38486108309499,3.10513658162888,2.52389953621658,0.285650984403804,0,14.4539143073646,14.5685115947719,13.7882817991503,0,0.127687338085188,0.153606533256243,9.89147157976454,7.593474419,10.4182674111352,0,0.56276261003168,1.37518422999129,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,2.89731548382698,2.85764605063156,3.18005617059306,0.14084341977668,5.13305909657271,5.09610479413291,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,1.76922110389975,5.17653919831709,6.62524555381181,7.27312879702833,0,0,0,0,0,0,0,0.599162557619291,5.49000723382352,17.7172636479139,2.25971616249959,0.511430914660661,3.32460871295296,2.10913641988085,0.611036183101898,5.84712761867437,0,0,0.520481771850815,0.459804208866946,0,0.30140963567143,0,0.12811372028485,0.187403449119458,0.258703370739016,4.31135985865684,7.37513712654495,2.28736461413134,5.69908904311695,5.56094498451196,4.52727816478817,3.49829631893504,0.59710280045548,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0.134206418760372,2.3131894342054,8.43817821510132,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,1.51482556322624,0,0,0,0.716906393857656,2.45078541490634,2.83076530788832,0,0,0,25.0630626809009,0.425820255624806,2.31485284767432,0.977321756121456,4.12425307431339,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,1.08036656418786,1.03486947026204,0.428674070063185,0.354680467284547,0,0.493647061806363,0.608929898229199,0,0,0,0.49465875882444,0.807322133479528,0.542816324353403,0.358117032009409,0.492422699235184,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.540026704109006,0.836353184057875,0.655087691238533,0.944050424693745,1.32245529160537,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0.563047426353546,11.9048555773722,5.78794623513478,0,2.82375921308533,2.76195141904306,3.43737308063638,2.06223818812425,0,0,2.02506750069542,1.80128481289688,1.81256963593682,1.55328093525546,2.69847103718859,7.18244772121856,2.90247129782028,4.37592090722929,3.35381060204772,3.67687016900028,5.11167473943715,2.88449080134452,2.88827288632634,2.27427490587418,3.8021894983536,2.82939512079114,1.87283014939765,2.68905640100451,2.35485422718014,1.90517476513229,2.66533949673168,1.73618298417335,2.47251540481984,2.94397840268795,2.74295401908332,1.77475806159337,2.62279808942053,2.76158191601424,2.91739079287525,2.36920902096694,1.82927972872773,2.36762740294059,4.07412341537585,6.73370725989286,1.89816028998679,1.97008964751127,0.818462086339379,1.54936841185966,3.2794123866794,8.49355964989016,4.21076895201735,2.14871054048298,2.29545998482612,4.41182838239031,4.17362104116759|short_description=p3@Dlx5}}
|EntrezGene=13395
|HGNC=
|UniProt=P70396,Q3TYA7
|association_with_transcript=118bp_to_ENSMUST00000142635,NM_010056,NM_198854,uc009awy.1,uc009awz.1_5end
|description=CAGE_peak_3_at_Dlx5_5end
|id=chr6:6831928..6831949,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,7.97e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003080!1.67e-10!40;UBERON:0002780!2.59e-10!39;UBERON:0001890!2.59e-10!39;UBERON:0006240!2.59e-10!39;UBERON:0002791!1.27e-09!29;UBERON:0003528!1.27e-09!29;UBERON:0001893!1.27e-09!29;UBERON:0003056!1.86e-09!49;UBERON:0000955!3.40e-08!50;UBERON:0006238!3.40e-08!50;UBERON:0000033!1.25e-07!63;UBERON:0002616!1.29e-07!49;UBERON:0002020!2.13e-07!34;UBERON:0000026!2.18e-07!13;UBERON:0004708!2.18e-07!13;UBERON:0002101!2.18e-07!13;UBERON:0004357!2.18e-07!13;UBERON:0009872!2.18e-07!13;UBERON:0004347!2.18e-07!13;UBERON:0005732!2.18e-07!13;UBERON:0005733!2.18e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.65e-13,29;UBERON:0002791,2.65e-13,29;UBERON:0001893,2.65e-13,29;UBERON:0002780,1.15e-11,39;UBERON:0001890,1.15e-11,39;UBERON:0006240,1.15e-11,39;UBERON:0000026,2.89e-11,12;UBERON:0004708,2.89e-11,12;UBERON:0002101,2.89e-11,12;UBERON:0004357,2.89e-11,12;UBERON:0004347,2.89e-11,12;UBERON:0005732,2.89e-11,12;UBERON:0005733,2.89e-11,12;UBERON:0003080,3.61e-11,40;UBERON:0002020,2.72e-10,34;UBERON:0010707,4.08e-10,13;UBERON:0000956,1.55e-09,21;UBERON:0001869,1.55e-09,21;UBERON:0000203,1.55e-09,21;UBERON:0000955,1.81e-09,47;UBERON:0006238,1.81e-09,47;UBERON:0002616,1.09e-08,46;UBERON:0003056,1.06e-07,49;UBERON:0002102,1.20e-07,7;UBERON:0004710,1.20e-07,7;UBERON:0005419,1.20e-07,7;UBERON:0005417,1.20e-07,7;UBERON:0005729,1.20e-07,7;UBERON:0002619,3.38e-07,17;UBERON:0000369,4.89e-07,5;UBERON:0002435,4.89e-07,5;UBERON:0000204,4.89e-07,5;UBERON:0010082,4.89e-07,5;UBERON:0001049,7.65e-07,52;UBERON:0005068,7.65e-07,52;UBERON:0006241,7.65e-07,52;UBERON:0007135,7.65e-07,52
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,1.92109152660777,2.38486108309499,3.10513658162888,2.52389953621658,0.285650984403804,0,14.4539143073646,14.5685115947719,13.7882817991503,0,0.127687338085188,0.153606533256243,9.89147157976454,7.593474419,10.4182674111352,0,0.56276261003168,1.37518422999129,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,2.89731548382698,2.85764605063156,3.18005617059306,0.14084341977668,5.13305909657271,5.09610479413291,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,1.76922110389975,5.17653919831709,6.62524555381181,7.27312879702833,0,0,0,0,0,0,0,0.599162557619291,5.49000723382352,17.7172636479139,2.25971616249959,0.511430914660661,3.32460871295296,2.10913641988085,0.611036183101898,5.84712761867437,0,0,0.520481771850815,0.459804208866946,0,0.30140963567143,0,0.12811372028485,0.187403449119458,0.258703370739016,4.31135985865684,7.37513712654495,2.28736461413134,5.69908904311695,5.56094498451196,4.52727816478817,3.49829631893504,0.59710280045548,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0.134206418760372,2.3131894342054,8.43817821510132,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,1.51482556322624,0,0,0,0.716906393857656,2.45078541490634,2.83076530788832,0,0,0,25.0630626809009,0.425820255624806,2.31485284767432,0.977321756121456,4.12425307431339,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,1.08036656418786,1.03486947026204,0.428674070063185,0.354680467284547,0,0.493647061806363,0.608929898229199,0,0,0,0.49465875882444,0.807322133479528,0.542816324353403,0.358117032009409,0.492422699235184,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.540026704109006,0.836353184057875,0.655087691238533,0.944050424693745,1.32245529160537,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0.563047426353546,11.9048555773722,5.78794623513478,0,2.82375921308533,2.76195141904306,3.43737308063638,2.06223818812425,0,0,2.02506750069542,1.80128481289688,1.81256963593682,1.55328093525546,2.69847103718859,7.18244772121856,2.90247129782028,4.37592090722929,3.35381060204772,3.67687016900028,5.11167473943715,2.88449080134452,2.88827288632634,2.27427490587418,3.8021894983536,2.82939512079114,1.87283014939765,2.68905640100451,2.35485422718014,1.90517476513229,2.66533949673168,1.73618298417335,2.47251540481984,2.94397840268795,2.74295401908332,1.77475806159337,2.62279808942053,2.76158191601424,2.91739079287525,2.36920902096694,1.82927972872773,2.36762740294059,4.07412341537585,6.73370725989286,1.89816028998679,1.97008964751127,0.818462086339379,1.54936841185966,3.2794123866794,8.49355964989016,4.21076895201735,2.14871054048298,2.29545998482612,4.41182838239031,4.17362104116759
|short_description=p3@Dlx5
}}

Revision as of 10:28, 14 September 2013

Short description:p3@Dlx5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dlx5_5end
Coexpression cluster:NA
Association with transcript: 118bp_to_ENSMUST00000142635, NM_010056, NM_198854, uc009awy.1, uc009awz.1_5end
EntrezGene:Dlx5
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Dlx5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F117.72
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.85
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H27.38
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I925.06
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex7.97e-076

Uber anatomy
Ontology termp-valuen
brain grey matter2.65e-1329
regional part of telencephalon2.65e-1329
telencephalon2.65e-1329
regional part of forebrain1.15e-1139
forebrain1.15e-1139
future forebrain1.15e-1139
appendage2.89e-1112
paired limb/fin2.89e-1112
limb2.89e-1112
paired limb/fin bud2.89e-1112
limb bud2.89e-1112
limb/fin field2.89e-1112
limb field2.89e-1112
anterior neural tube3.61e-1140
gray matter2.72e-1034
appendage girdle complex4.08e-1013
cerebral cortex1.55e-0921
cerebral hemisphere1.55e-0921
pallium1.55e-0921
brain1.81e-0947
future brain1.81e-0947
regional part of brain1.09e-0846
pre-chordal neural plate1.06e-0749
forelimb1.20e-077
pectoral appendage1.20e-077
pectoral appendage bud1.20e-077
forelimb bud1.20e-077
forelimb/pectoral fin field1.20e-077
regional part of cerebral cortex3.38e-0717
corpus striatum4.89e-075
striatum4.89e-075
ventral part of telencephalon4.89e-075
future corpus striatum4.89e-075
neural tube7.65e-0752
neural rod7.65e-0752
future spinal cord7.65e-0752
neural keel7.65e-0752







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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