FFCP PHASE1:Hg19::chrX:13023985..13024011,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1468|description=CAGE_peak_at_chrX:13023985..13024011,+|id=chrX:13023985..13024011,+|ontology_enrichment_celltype=CL:0002057!9.40e-73!42;CL:0000860!4.74e-67!45;CL:0000738!9.52e-63!140;CL:0002009!2.06e-60!65;CL:0002087!1.34e-57!119;CL:0002194!2.45e-56!63;CL:0000576!2.45e-56!63;CL:0000040!2.45e-56!63;CL:0000559!2.45e-56!63;CL:0000557!3.63e-54!71;CL:0000037!1.68e-52!172;CL:0000566!1.68e-52!172;CL:0000766!8.09e-52!76;CL:0000988!9.22e-52!182;CL:0002031!2.88e-51!124;CL:0002032!2.59e-50!165;CL:0000837!2.59e-50!165;CL:0000839!2.06e-49!70;CL:0000763!2.36e-45!112;CL:0000049!2.36e-45!112;CL:0000134!5.28e-18!358;CL:0002320!2.82e-17!365;CL:0002393!8.30e-16!9;CL:0002397!8.30e-16!9;CL:0000219!1.01e-14!390;CL:0000048!2.28e-12!430;CL:0000723!6.29e-12!436;CL:0000453!6.70e-12!5;CL:0000034!2.32e-11!444;CL:0000990!1.49e-08!8;CL:0000080!4.41e-08!6;CL:0000767!2.95e-07!3;CL:0000451!7.77e-07!10|ontology_enrichment_celltype_v019=CL:0000860;2.66e-45;33!CL:0002057;2.66e-45;33!CL:0000576;1.63e-36;48!CL:0002393;5.20e-36;6!CL:0002397;5.20e-36;6!CL:0000473;4.05e-33;39!CL:0000234;4.05e-33;39!CL:0000766;3.73e-27;69!CL:0000453;8.95e-20;5!CL:0001014;1.08e-13;2!CL:0001016;1.08e-13;2!CL:0002087;4.47e-13;104!CL:0000990;4.73e-11;8!CL:0000763;7.92e-11;100!CL:0000738;1.43e-09;136!CL:0000451;4.65e-09;10|ontology_enrichment_celltype_v019_2=CL:0000860,4.24e-70,42;CL:0002057,4.24e-70,42;CL:0000473,2.16e-66,48;CL:0000234,2.16e-66,48;CL:0002009,6.06e-60,61;CL:0000557,3.33e-54,67;CL:0002194,3.79e-52,59;CL:0000576,3.79e-52,59;CL:0000040,3.79e-52,59;CL:0000559,3.79e-52,59;CL:0000839,3.42e-46,66;CL:0000766,7.59e-46,72;CL:0000763,1.35e-40,108;CL:0000049,1.35e-40,108;CL:0000738,8.20e-39,136;CL:0002031,7.17e-36,120;CL:0002032,6.01e-32,161;CL:0000837,6.01e-32,161;CL:0002087,6.45e-32,115;CL:0000037,2.18e-30,168;CL:0000988,1.46e-28,177;CL:0002393,7.06e-24,9;CL:0002397,7.06e-24,9;CL:0000453,7.22e-20,5;CL:0001014,1.08e-13,2;CL:0001016,1.08e-13,2;CL:0000134,2.16e-11,354;CL:0000990,4.21e-11,8;CL:0002320,4.70e-11,361;CL:0000219,7.23e-10,386;CL:0000048,2.84e-09,427;CL:0000451,4.23e-09,10;CL:0000723,4.63e-09,433;CL:0000034,8.74e-09,441|ontology_enrichment_development_v019=CL:0002057;1.41e-49;42!CL:0000049;9.49e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.02e-54!102;UBERON:0003061!1.02e-54!102;UBERON:0002371!2.70e-51!80;UBERON:0002193!2.37e-50!112;UBERON:0001474!9.91e-47!86;UBERON:0004765!1.09e-37!101;UBERON:0001434!1.09e-37!101;UBERON:0002405!1.09e-37!115;UBERON:0003081!3.74e-20!216;UBERON:0002204!2.91e-18!167;UBERON:0002384!2.76e-16!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-47,76;UBERON:0001474,1.76e-43,82;UBERON:0004765,3.32e-39,90;UBERON:0002405,8.65e-38,93;UBERON:0002390,1.28e-35,98;UBERON:0003061,1.28e-35,98;UBERON:0001434,8.22e-35,100;UBERON:0002193,7.09e-32,108;UBERON:0002204,7.65e-19,167;UBERON:0003081,1.38e-14,203;UBERON:0002384,1.35e-10,371;UBERON:0000926,1.52e-07,315;UBERON:0004120,1.52e-07,315;UBERON:0006603,1.52e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.23150884174919,1.96776953284198,0.786728553697808,0.383829398097213,2.32224184974114,0,0,0,0,0,0,13.8498852132969,15.4419224552009,3.25516306073778,0.671746422719773,0,0.515151135268373,0.581592955118259,1.13362783106643,0.485168122375632,0.697287110717054,2.05583944010913,0.929119112685311,1.43846196161075,0.768482119587302,0.709446689665756,5.86067657252252,4.51839278508678,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,3.36692281607993,7.70229664982625,4.47535988059329,0,0.199463657621632,0.852449501065388,0.870627715885752,2.26954089876456,3.73693349397345,0,1.0429658368404,1.73751075764093,1.21079900526674,4.41933163185078,4.1140110367315,2.74631872205524,2.76385589954557,2.09658645508376,1.79725809834392,0.750884464207532,0.964353520182481,0.855038231223746,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1468 | |||
|description=CAGE_peak_at_chrX:13023985..13024011,+ | |||
|id=chrX:13023985..13024011,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.40e-73!42;CL:0000860!4.74e-67!45;CL:0000738!9.52e-63!140;CL:0002009!2.06e-60!65;CL:0002087!1.34e-57!119;CL:0002194!2.45e-56!63;CL:0000576!2.45e-56!63;CL:0000040!2.45e-56!63;CL:0000559!2.45e-56!63;CL:0000557!3.63e-54!71;CL:0000037!1.68e-52!172;CL:0000566!1.68e-52!172;CL:0000766!8.09e-52!76;CL:0000988!9.22e-52!182;CL:0002031!2.88e-51!124;CL:0002032!2.59e-50!165;CL:0000837!2.59e-50!165;CL:0000839!2.06e-49!70;CL:0000763!2.36e-45!112;CL:0000049!2.36e-45!112;CL:0000134!5.28e-18!358;CL:0002320!2.82e-17!365;CL:0002393!8.30e-16!9;CL:0002397!8.30e-16!9;CL:0000219!1.01e-14!390;CL:0000048!2.28e-12!430;CL:0000723!6.29e-12!436;CL:0000453!6.70e-12!5;CL:0000034!2.32e-11!444;CL:0000990!1.49e-08!8;CL:0000080!4.41e-08!6;CL:0000767!2.95e-07!3;CL:0000451!7.77e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-45;33!CL:0002057;2.66e-45;33!CL:0000576;1.63e-36;48!CL:0002393;5.20e-36;6!CL:0002397;5.20e-36;6!CL:0000473;4.05e-33;39!CL:0000234;4.05e-33;39!CL:0000766;3.73e-27;69!CL:0000453;8.95e-20;5!CL:0001014;1.08e-13;2!CL:0001016;1.08e-13;2!CL:0002087;4.47e-13;104!CL:0000990;4.73e-11;8!CL:0000763;7.92e-11;100!CL:0000738;1.43e-09;136!CL:0000451;4.65e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.24e-70,42;CL:0002057,4.24e-70,42;CL:0000473,2.16e-66,48;CL:0000234,2.16e-66,48;CL:0002009,6.06e-60,61;CL:0000557,3.33e-54,67;CL:0002194,3.79e-52,59;CL:0000576,3.79e-52,59;CL:0000040,3.79e-52,59;CL:0000559,3.79e-52,59;CL:0000839,3.42e-46,66;CL:0000766,7.59e-46,72;CL:0000763,1.35e-40,108;CL:0000049,1.35e-40,108;CL:0000738,8.20e-39,136;CL:0002031,7.17e-36,120;CL:0002032,6.01e-32,161;CL:0000837,6.01e-32,161;CL:0002087,6.45e-32,115;CL:0000037,2.18e-30,168;CL:0000988,1.46e-28,177;CL:0002393,7.06e-24,9;CL:0002397,7.06e-24,9;CL:0000453,7.22e-20,5;CL:0001014,1.08e-13,2;CL:0001016,1.08e-13,2;CL:0000134,2.16e-11,354;CL:0000990,4.21e-11,8;CL:0002320,4.70e-11,361;CL:0000219,7.23e-10,386;CL:0000048,2.84e-09,427;CL:0000451,4.23e-09,10;CL:0000723,4.63e-09,433;CL:0000034,8.74e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-49;42!CL:0000049;9.49e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-54!102;UBERON:0003061!1.02e-54!102;UBERON:0002371!2.70e-51!80;UBERON:0002193!2.37e-50!112;UBERON:0001474!9.91e-47!86;UBERON:0004765!1.09e-37!101;UBERON:0001434!1.09e-37!101;UBERON:0002405!1.09e-37!115;UBERON:0003081!3.74e-20!216;UBERON:0002204!2.91e-18!167;UBERON:0002384!2.76e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-47,76;UBERON:0001474,1.76e-43,82;UBERON:0004765,3.32e-39,90;UBERON:0002405,8.65e-38,93;UBERON:0002390,1.28e-35,98;UBERON:0003061,1.28e-35,98;UBERON:0001434,8.22e-35,100;UBERON:0002193,7.09e-32,108;UBERON:0002204,7.65e-19,167;UBERON:0003081,1.38e-14,203;UBERON:0002384,1.35e-10,371;UBERON:0000926,1.52e-07,315;UBERON:0004120,1.52e-07,315;UBERON:0006603,1.52e-07,315 | |||
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|short_description=p@chrX:13023985..13024011,+ | |||
}} |
Revision as of 10:44, 14 September 2013
Short description: | p@chrX:13023985..13024011, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:13023985..13024011, + |
Coexpression cluster: | C1468_immature_CD14_Basophils_Monocytederived_migratory_Peripheral_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-47 | 76 |
bone element | 1.76e-43 | 82 |
skeletal element | 3.32e-39 | 90 |
immune system | 8.65e-38 | 93 |
hematopoietic system | 1.28e-35 | 98 |
blood island | 1.28e-35 | 98 |
skeletal system | 8.22e-35 | 100 |
hemolymphoid system | 7.09e-32 | 108 |
musculoskeletal system | 7.65e-19 | 167 |
lateral plate mesoderm | 1.38e-14 | 203 |
connective tissue | 1.35e-10 | 371 |
mesoderm | 1.52e-07 | 315 |
mesoderm-derived structure | 1.52e-07 | 315 |
presumptive mesoderm | 1.52e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.